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The map label for this gene is yafE [C]

Identifier: 119714736

GI number: 119714736

Start: 504157

End: 504912

Strand: Reverse

Name: yafE [C]

Synonym: Noca_0472

Alternate gene names: 119714736

Gene position: 504912-504157 (Counterclockwise)

Preceding gene: 119714737

Following gene: 119714734

Centisome position: 10.13

GC content: 74.47

Gene sequence:

>756_bases
ATGGACGATCCGCGCAGCCACGCGATCGCCCGTCCCGTCCGGCAGCTGTCTCGCGGCCGCGTGCGGGCGACCGAGGGCGC
GCGCCCGAGCCCGAACATCTGGCAGCACCCCGCGACCTACGAGATCGAGAACCGCGCGGTCGACCCCGACGGGCTGCTGG
CCGCGGCCATGCTGGCGGTCGACCGGTGGGCCGATCGCACCGTGCTCGACGTCGGCTGCGGCACCGGCTTCCACCTGCCG
TGGTTCGCCGAGACCGCGGCGTCGGTGATCGGCGTCGAGCCGCACGCCGACCTGGTTGCGCTCGCGCGGCGGCGCAGCCG
GCGGCTCGCGAACGTGACGGTGCACCAGGGCGTCGCCCAGTCCCTGCCCCTCCCGGACGCCTCGGTCGACGTCGTCCACG
CCCGCTGGGCCTACTTCTTCGGGCCCGGCTGCGAGCCCGGGTTGGCCGAGCTGGACCGGGTGGTGCGCCGCGGCGGCACG
GCGTACGTCATCGACAACGACCCGACCCGCTCCACGTTCGGCGGGTGGTTCCGGCGCGGCTACCCCGAGGTCGACCCGGT
CGCGGTCGAGCGGTTCTGGTCCGCCCGCGGCTGGACCCGCGTGCCCCTCGACCTGCGCTGGTCCTTCTCGAGTCGCGCCG
ACCTGGAGGCGGTGGTGCGGATCGAGTTCACCCCCCAGGTCGCCGACCAGGTGCTCCCCGAGCACGCCGGCACCGAGGTC
GACTACGCCGTCAACCTGTGGTGGAAGCGGTTCTGA

Upstream 100 bases:

>100_bases
GAGGACGTGAAGGTCGAGTGGGCCGCGCCCAACGGCACGCCCGGCATCGGCGCCGCGCAGTTCCAGACCCCGAGCGGCCT
GGTCCGGCTGTAGGACGCTG

Downstream 100 bases:

>100_bases
GGCTCGGCGGTCCGGGCGGCGGTTTCCCCGGGTACCCGGGGAAACCGGAACTGTTGGGCCGAAGTTTCGGGCCAGAAGTT
CCAACATCCCCGGTGAACCG

Product: type 11 methyltransferase

Products: NA

Alternate protein names: Methylase Involved In Ubiquinone/Menaquinone Biosynthesis; Ubiquinone/Menaquinone Biosynthesis Methylase-Like Protein; Sam Dependent Methyltransferase

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MDDPRSHAIARPVRQLSRGRVRATEGARPSPNIWQHPATYEIENRAVDPDGLLAAAMLAVDRWADRTVLDVGCGTGFHLP
WFAETAASVIGVEPHADLVALARRRSRRLANVTVHQGVAQSLPLPDASVDVVHARWAYFFGPGCEPGLAELDRVVRRGGT
AYVIDNDPTRSTFGGWFRRGYPEVDPVAVERFWSARGWTRVPLDLRWSFSSRADLEAVVRIEFTPQVADQVLPEHAGTEV
DYAVNLWWKRF

Sequences:

>Translated_251_residues
MDDPRSHAIARPVRQLSRGRVRATEGARPSPNIWQHPATYEIENRAVDPDGLLAAAMLAVDRWADRTVLDVGCGTGFHLP
WFAETAASVIGVEPHADLVALARRRSRRLANVTVHQGVAQSLPLPDASVDVVHARWAYFFGPGCEPGLAELDRVVRRGGT
AYVIDNDPTRSTFGGWFRRGYPEVDPVAVERFWSARGWTRVPLDLRWSFSSRADLEAVVRIEFTPQVADQVLPEHAGTEV
DYAVNLWWKRF
>Mature_251_residues
MDDPRSHAIARPVRQLSRGRVRATEGARPSPNIWQHPATYEIENRAVDPDGLLAAAMLAVDRWADRTVLDVGCGTGFHLP
WFAETAASVIGVEPHADLVALARRRSRRLANVTVHQGVAQSLPLPDASVDVVHARWAYFFGPGCEPGLAELDRVVRRGGT
AYVIDNDPTRSTFGGWFRRGYPEVDPVAVERFWSARGWTRVPLDLRWSFSSRADLEAVVRIEFTPQVADQVLPEHAGTEV
DYAVNLWWKRF

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28072; Mature: 28072

Theoretical pI: Translated: 7.22; Mature: 7.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDPRSHAIARPVRQLSRGRVRATEGARPSPNIWQHPATYEIENRAVDPDGLLAAAMLAV
CCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHH
DRWADRTVLDVGCGTGFHLPWFAETAASVIGVEPHADLVALARRRSRRLANVTVHQGVAQ
HHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SLPLPDASVDVVHARWAYFFGPGCEPGLAELDRVVRRGGTAYVIDNDPTRSTFGGWFRRG
HCCCCCCCEEEEEHHHHEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCC
YPEVDPVAVERFWSARGWTRVPLDLRWSFSSRADLEAVVRIEFTPQVADQVLPEHAGTEV
CCCCCHHHHHHHHHCCCCEECCEEEEECCCCCCCCEEEEEEEECHHHHHHHHHHHCCCCE
DYAVNLWWKRF
EEEEEEEEECC
>Mature Secondary Structure
MDDPRSHAIARPVRQLSRGRVRATEGARPSPNIWQHPATYEIENRAVDPDGLLAAAMLAV
CCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHH
DRWADRTVLDVGCGTGFHLPWFAETAASVIGVEPHADLVALARRRSRRLANVTVHQGVAQ
HHHCCCEEEEECCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SLPLPDASVDVVHARWAYFFGPGCEPGLAELDRVVRRGGTAYVIDNDPTRSTFGGWFRRG
HCCCCCCCEEEEEHHHHEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCC
YPEVDPVAVERFWSARGWTRVPLDLRWSFSSRADLEAVVRIEFTPQVADQVLPEHAGTEV
CCCCCHHHHHHHHHCCCCEECCEEEEECCCCCCCCEEEEEEEECHHHHHHHHHHHCCCCE
DYAVNLWWKRF
EEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA