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The map label for this gene is opuCC [H]

Identifier: 119714719

GI number: 119714719

Start: 484783

End: 485739

Strand: Direct

Name: opuCC [H]

Synonym: Noca_0455

Alternate gene names: 119714719

Gene position: 484783-485739 (Clockwise)

Preceding gene: 119714718

Following gene: 119714721

Centisome position: 9.72

GC content: 69.28

Gene sequence:

>957_bases
ATGCACATGCAGGTACGACGCTCGTTGGCCGCGGCGCTCGCCGTCGGCTCCCTCTTCCTCGCCACGGCCTGTGCCGACGA
CGACCTCGACTCCAAGCAGGCCGACGACGCCACACCGTCGGCGACCACCGACCAGGGCCCGGTCCGGATCGCGGGTCAGA
GCTTCACCGAGGCGGCCATCGTCGCCGCGATGTACGACGAGCTCCTCACCGCCGCCGGCTACGACACCGACGTGAAGCTG
GTCGACACCCGCGACGCCTACATGGCCACGTTCCCGGACAGTGTCGACGTCGTGCCCGAGTACGTCGGCGGCATCGTCAA
CTTCCTCAACGCCCGGGAGAACGGCGCGAAGGCCGAGCCCTTCACGGCCGGCGACGGGGCCGAGCTCGTCGACCAGGGCA
AGTCGCTGCTCGATGCGGCGGGCATCGCGCTCCTCGACCAGTCCGCGGCGACCGACACCAACGCGTTCTTCGTGACCAAG
GACTTCTCCGAGTCCGAGGGCGTGACCAAGCTCTCCGACCTCGAGGGCAGGTCGGTCAAGCTGGCCGCGGCTCCCGACTG
CGAGGGCCGGCTCGACTGCGAGGGCGGCCTGGTCGACCAGTACGGCATCGACGTCACCGAGGTGCTCCCGCTGGGCTACG
CCAGCAACGACACCTACCAGTCGGTGATCAGCGGCGAGTCCGAGCTCGGCGAGACCAGCACGACCGACGGCACCCTGGAG
TCGCAGGGCCTGGTGGTGCTCGAGGACGACAAGCAGATCCAGCCCGCCCAGAACCTCGTCCCCGCGGTGTCGAGCGCCTT
CTTGGAGCAGCACCCGGACATCGCGGACGTCCTCAACGGGTTGATGGCCGCCCTCACCACGGAGAAGCTCACCGAGCTGA
ACGGCGCCGTGGCCGTCGACCGCGACAAGCCCGAGGACGTCGCCCACCAGTTCCTGGTGGACGAGGGGCTCATCTAG

Upstream 100 bases:

>100_bases
ATGTCGGTGGACGCACCTAGAGTTACCGAAGCAGCCGACGCCGTCGGTCGTTAGCAGCATCCGGACACGCGCGGCACCCT
GCCGCGGGACACAGAAGGAC

Downstream 100 bases:

>100_bases
CCCGCACCTCGAAGTCCCGCAGCGCGAGGGCCGCGGGATCGACGCCGGTCGGGTCGAGGCCCGGTACGTCGATCCGCGGC
CCGTGCGGCGCGTCCACTTG

Product: glycine betaine ABC transporter substrate-binding protein

Products: NA

Alternate protein names: Osmoprotectant-binding protein [H]

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MHMQVRRSLAAALAVGSLFLATACADDDLDSKQADDATPSATTDQGPVRIAGQSFTEAAIVAAMYDELLTAAGYDTDVKL
VDTRDAYMATFPDSVDVVPEYVGGIVNFLNARENGAKAEPFTAGDGAELVDQGKSLLDAAGIALLDQSAATDTNAFFVTK
DFSESEGVTKLSDLEGRSVKLAAAPDCEGRLDCEGGLVDQYGIDVTEVLPLGYASNDTYQSVISGESELGETSTTDGTLE
SQGLVVLEDDKQIQPAQNLVPAVSSAFLEQHPDIADVLNGLMAALTTEKLTELNGAVAVDRDKPEDVAHQFLVDEGLI

Sequences:

>Translated_318_residues
MHMQVRRSLAAALAVGSLFLATACADDDLDSKQADDATPSATTDQGPVRIAGQSFTEAAIVAAMYDELLTAAGYDTDVKL
VDTRDAYMATFPDSVDVVPEYVGGIVNFLNARENGAKAEPFTAGDGAELVDQGKSLLDAAGIALLDQSAATDTNAFFVTK
DFSESEGVTKLSDLEGRSVKLAAAPDCEGRLDCEGGLVDQYGIDVTEVLPLGYASNDTYQSVISGESELGETSTTDGTLE
SQGLVVLEDDKQIQPAQNLVPAVSSAFLEQHPDIADVLNGLMAALTTEKLTELNGAVAVDRDKPEDVAHQFLVDEGLI
>Mature_318_residues
MHMQVRRSLAAALAVGSLFLATACADDDLDSKQADDATPSATTDQGPVRIAGQSFTEAAIVAAMYDELLTAAGYDTDVKL
VDTRDAYMATFPDSVDVVPEYVGGIVNFLNARENGAKAEPFTAGDGAELVDQGKSLLDAAGIALLDQSAATDTNAFFVTK
DFSESEGVTKLSDLEGRSVKLAAAPDCEGRLDCEGGLVDQYGIDVTEVLPLGYASNDTYQSVISGESELGETSTTDGTLE
SQGLVVLEDDKQIQPAQNLVPAVSSAFLEQHPDIADVLNGLMAALTTEKLTELNGAVAVDRDKPEDVAHQFLVDEGLI

Specific function: Member of a high affinity multicomponent binding- protein-dependent transport system for glycine betaine, carnitine, and choline [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=283, Percent_Identity=26.8551236749117, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 33375; Mature: 33375

Theoretical pI: Translated: 3.75; Mature: 3.75

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHMQVRRSLAAALAVGSLFLATACADDDLDSKQADDATPSATTDQGPVRIAGQSFTEAAI
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHH
VAAMYDELLTAAGYDTDVKLVDTRDAYMATFPDSVDVVPEYVGGIVNFLNARENGAKAEP
HHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
FTAGDGAELVDQGKSLLDAAGIALLDQSAATDTNAFFVTKDFSESEGVTKLSDLEGRSVK
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCEEE
LAAAPDCEGRLDCEGGLVDQYGIDVTEVLPLGYASNDTYQSVISGESELGETSTTDGTLE
EEECCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCC
SQGLVVLEDDKQIQPAQNLVPAVSSAFLEQHPDIADVLNGLMAALTTEKLTELNGAVAVD
CCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEC
RDKPEDVAHQFLVDEGLI
CCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHMQVRRSLAAALAVGSLFLATACADDDLDSKQADDATPSATTDQGPVRIAGQSFTEAAI
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHH
VAAMYDELLTAAGYDTDVKLVDTRDAYMATFPDSVDVVPEYVGGIVNFLNARENGAKAEP
HHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
FTAGDGAELVDQGKSLLDAAGIALLDQSAATDTNAFFVTKDFSESEGVTKLSDLEGRSVK
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCEEE
LAAAPDCEGRLDCEGGLVDQYGIDVTEVLPLGYASNDTYQSVISGESELGETSTTDGTLE
EEECCCCCCCCCCCCCCCHHHCCCHHHHHCCCCCCCHHHHHHHCCHHHCCCCCCCCCCCC
SQGLVVLEDDKQIQPAQNLVPAVSSAFLEQHPDIADVLNGLMAALTTEKLTELNGAVAVD
CCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEC
RDKPEDVAHQFLVDEGLI
CCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10216873; 9384377 [H]