| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is folB [H]
Identifier: 119714711
GI number: 119714711
Start: 478787
End: 479173
Strand: Direct
Name: folB [H]
Synonym: Noca_0447
Alternate gene names: 119714711
Gene position: 478787-479173 (Clockwise)
Preceding gene: 119714710
Following gene: 119714712
Centisome position: 9.6
GC content: 67.7
Gene sequence:
>387_bases GTGACCGAACGGCCGACCGACGAGCTGAGCGTCACCGGCATCGCGTGCTACGGGCACCACGGCGTCTTCGACTTCGAGCG ACGCGAGGGGCAGACGTTCGTCGTCGACCTCGTGCTGGGCGTCGACACCGCCCCCGCAGCGGCGTCCGACGACTTGCAAG ACACCGTCGACTACGGGAGTCTCGTGGCTTCGGTGCAAGCCGCCGTGGAGAAGGATCCGGTCGACCTGATCGAGACCCTG GCCCAGCGGATCGCGGGCGTCTGCCTCTTGGACGGCCGTGTTGAATGGGCGAGGGTGACGGTCCACAAGCCGGACGCACC CATCGAAGCGACGTTCGCGGACGTCACGCTGACGATCACCCGGAGACGTGAGGGCACCCGTGACTGA
Upstream 100 bases:
>100_bases ACCTGGCCCGGCATGCGGTGTGGGGCGTACGGGTGCACGACGTCCGAGCCTCCCGGGACGCGCTCCGCGTCGCCGAGCAG CTGAGCGAGGAGGGTTCCAC
Downstream 100 bases:
>100_bases GACCCCGAACCCGAACATCATCGACGCGGACACGCTGACCGGCGAGATGCGGCCGATCCGCCGTGCGGTGCTGGCACTCG GGTCCAACCTGGGTGAGCGG
Product: dihydroneopterin aldolase
Products: NA
Alternate protein names: DHNA [H]
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MTERPTDELSVTGIACYGHHGVFDFERREGQTFVVDLVLGVDTAPAAASDDLQDTVDYGSLVASVQAAVEKDPVDLIETL AQRIAGVCLLDGRVEWARVTVHKPDAPIEATFADVTLTITRRREGTRD
Sequences:
>Translated_128_residues MTERPTDELSVTGIACYGHHGVFDFERREGQTFVVDLVLGVDTAPAAASDDLQDTVDYGSLVASVQAAVEKDPVDLIETL AQRIAGVCLLDGRVEWARVTVHKPDAPIEATFADVTLTITRRREGTRD >Mature_127_residues TERPTDELSVTGIACYGHHGVFDFERREGQTFVVDLVLGVDTAPAAASDDLQDTVDYGSLVASVQAAVEKDPVDLIETLA QRIAGVCLLDGRVEWARVTVHKPDAPIEATFADVTLTITRRREGTRD
Specific function: Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin [H]
COG id: COG1539
COG function: function code H; Dihydroneopterin aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DHNA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006156 - InterPro: IPR006157 [H]
Pfam domain/function: PF02152 FolB [H]
EC number: =4.1.2.25 [H]
Molecular weight: Translated: 13913; Mature: 13781
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTERPTDELSVTGIACYGHHGVFDFERREGQTFVVDLVLGVDTAPAAASDDLQDTVDYGS CCCCCCCCEEEEEEEEECCCCCEEECCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHH LVASVQAAVEKDPVDLIETLAQRIAGVCLLDGRVEWARVTVHKPDAPIEATFADVTLTIT HHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCEEEEEEEEECCCCCCEEEEEEEEEEEE RRREGTRD ECCCCCCC >Mature Secondary Structure TERPTDELSVTGIACYGHHGVFDFERREGQTFVVDLVLGVDTAPAAASDDLQDTVDYGS CCCCCCCEEEEEEEEECCCCCEEECCCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHH LVASVQAAVEKDPVDLIETLAQRIAGVCLLDGRVEWARVTVHKPDAPIEATFADVTLTIT HHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCEEEEEEEEECCCCCCEEEEEEEEEEEE RRREGTRD ECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12000953 [H]