| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714706
Identifier: 119714706
GI number: 119714706
Start: 473580
End: 474293
Strand: Direct
Name: 119714706
Synonym: Noca_0442
Alternate gene names: NA
Gene position: 473580-474293 (Clockwise)
Preceding gene: 119714705
Following gene: 119714707
Centisome position: 9.5
GC content: 71.01
Gene sequence:
>714_bases ATGTCCCACCGCCGTACCTTCGCCGCCGCCGTCGCGCTGCTGGCCGCCGCGGTCATCGCGCCCCAGGCGCTGCCCGCCTC CGCGTCGCCCGCCGGCCGGGCCGTGACCGCCCAGCGGGCCGGCCAGGCGCTCATCCAGGGCGTTGTCGTCGACCAGGCCG GCCGCTACGTCGACGACGTCGAGGTCCAGGCGACCAAGGCCGACGGCACCCCTGCGGCCTCCGCGATCACCTACGCCAGC GACCGCGAAGACGGCCCCCAGCACGGCTACTTCTTCCTCGAGGTCACCCGTGGGACCTACACCCTGACGTTCTCGCGCGA TGGGTACCGGACGCTCGTTCTCGACGACCTCCAGATCGAGAGGGCTCGTCAGAAGCTGAGCCTGGGTGAGGTCGAGATCC AGAAGAAGCTGGCGGAGAGCAAGACCGAGGCCAGCCTCGTGCGGCGCACGATCACGACCAAGCAGAACGGCGAGGTCGTG GTGACCGTGTCCGCGAGGGGCGTCAAGCCCACGGGCGACGTCGAGATCCGCGAGGGCCGCACCGTGGTCGGCGAGGACGG CCTCAGGGCCAGGGACAACGGCCAGGTCACGATCGAGCTGGACCGGTTGCCCCGCGGGACCCACGAGCTCAAGGCCTACT ACCTCGGCTCCCCGGACCTGAAGGTGTCGGCGTCCACGTCCTTCACCCTGACCGTCACCAGGGGGCGGCACTGA
Upstream 100 bases:
>100_bases GATGAGAAGTCTCAGGTTCCGCCTGCTCCGACCGATGTTCCGCGTCAGAATCGCAATCGACGTCCGTCTGGTCAGCGTGC CGACTGAAACGAGGAACTCC
Downstream 100 bases:
>100_bases CCTAGAGTCTGCGCCATGCACGCATCCGACGTGGAGAACGACCTGGTCAACGTCCTCTTCACCGAGGAGCAGATCCAGCA ACGGCTGGCCGAGCTGGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MSHRRTFAAAVALLAAAVIAPQALPASASPAGRAVTAQRAGQALIQGVVVDQAGRYVDDVEVQATKADGTPAASAITYAS DREDGPQHGYFFLEVTRGTYTLTFSRDGYRTLVLDDLQIERARQKLSLGEVEIQKKLAESKTEASLVRRTITTKQNGEVV VTVSARGVKPTGDVEIREGRTVVGEDGLRARDNGQVTIELDRLPRGTHELKAYYLGSPDLKVSASTSFTLTVTRGRH
Sequences:
>Translated_237_residues MSHRRTFAAAVALLAAAVIAPQALPASASPAGRAVTAQRAGQALIQGVVVDQAGRYVDDVEVQATKADGTPAASAITYAS DREDGPQHGYFFLEVTRGTYTLTFSRDGYRTLVLDDLQIERARQKLSLGEVEIQKKLAESKTEASLVRRTITTKQNGEVV VTVSARGVKPTGDVEIREGRTVVGEDGLRARDNGQVTIELDRLPRGTHELKAYYLGSPDLKVSASTSFTLTVTRGRH >Mature_236_residues SHRRTFAAAVALLAAAVIAPQALPASASPAGRAVTAQRAGQALIQGVVVDQAGRYVDDVEVQATKADGTPAASAITYASD REDGPQHGYFFLEVTRGTYTLTFSRDGYRTLVLDDLQIERARQKLSLGEVEIQKKLAESKTEASLVRRTITTKQNGEVVV TVSARGVKPTGDVEIREGRTVVGEDGLRARDNGQVTIELDRLPRGTHELKAYYLGSPDLKVSASTSFTLTVTRGRH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25493; Mature: 25362
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHRRTFAAAVALLAAAVIAPQALPASASPAGRAVTAQRAGQALIQGVVVDQAGRYVDDV CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEECCE EVQATKADGTPAASAITYASDREDGPQHGYFFLEVTRGTYTLTFSRDGYRTLVLDDLQIE EEEEEECCCCCCHHEEEECCCCCCCCCCCEEEEEEECCEEEEEEECCCCEEEEEECHHHH RARQKLSLGEVEIQKKLAESKTEASLVRRTITTKQNGEVVVTVSARGVKPTGDVEIREGR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEECCC TVVGEDGLRARDNGQVTIELDRLPRGTHELKAYYLGSPDLKVSASTSFTLTVTRGRH EEECCCCCEECCCCEEEEEECCCCCCCHHEEEEEECCCCEEEECCCEEEEEEECCCC >Mature Secondary Structure SHRRTFAAAVALLAAAVIAPQALPASASPAGRAVTAQRAGQALIQGVVVDQAGRYVDDV CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCEECCE EVQATKADGTPAASAITYASDREDGPQHGYFFLEVTRGTYTLTFSRDGYRTLVLDDLQIE EEEEEECCCCCCHHEEEECCCCCCCCCCCEEEEEEECCEEEEEEECCCCEEEEEECHHHH RARQKLSLGEVEIQKKLAESKTEASLVRRTITTKQNGEVVVTVSARGVKPTGDVEIREGR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEECCC TVVGEDGLRARDNGQVTIELDRLPRGTHELKAYYLGSPDLKVSASTSFTLTVTRGRH EEECCCCCEECCCCEEEEEECCCCCCCHHEEEEEECCCCEEEECCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA