| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is tilS [H]
Identifier: 119714705
GI number: 119714705
Start: 472519
End: 473484
Strand: Direct
Name: tilS [H]
Synonym: Noca_0441
Alternate gene names: 119714705
Gene position: 472519-473484 (Clockwise)
Preceding gene: 119714704
Following gene: 119714706
Centisome position: 9.48
GC content: 76.92
Gene sequence:
>966_bases ATGAGCCTCCACCCCGCGATCGCCGCGGTGCGCCTCGCGGTACGCCGTGCCCTCGCCCACGTCGACCCGGGTCGGACCGT GGTCGTCGCGTGCTCCGGGGGCGCCGACTCGCTCGCGTTGCTCGCCGCGACGGTGTTCGAGGGCCGACGCGCCGGGTGGC GGGTCGTGGGCGCGACGGTCGACCACGGGCTCCAGCCCGGCTCGGCCGACCACGCCGCGCACGTCGTACGCCAGATGGCC GCCCTCGGCGCCGACGAGACCGTCGCCGCGACCGTGCACGTCGAGGCGGCCGGCCAGGGCCCGGAGGCGGCGGCCCGCCA GGCCCGCTACGCCGTCCTCGACCAGCTCGCCGAGCGCTTCGACGCCGACGCCGTGCTGCTCGGCCACACCCGCGACGACC AGGCCGAGACGGTGCTGCTCGGCCTGGCCAGGGGCTCCGGGGGGCGGTCGCTGGCCGGGATGCGACGCTCCTTCGACCGC TTCGTCCGCCCGCTCCTCGACCTCTCCCGCGCCGACACCGCCACCGCCTGCCAGGTCGCGGGGATCGAGTTCTGGAGCGA CCCCCACAACGAGGACCCCGCATTCACCCGGGTGCGGGTACGCCGCAGCGTGCTGCCGGTCCTCGAGGACCAGCTCGGTC CGGGGGTGGCCGAGGCGCTGGCCCGGACCGCCGACCAGCTGCGCGCGGACATGGACCTGCTCGACGACGCCGCCGAGGCG GCGTACCAGCGCCTGCGCGACCTTCCTGTCGACGGGCTGCTCGCCGAGCCCGGCCCGATCCGGCGGCGGGTGCTGCGGCT GGCCGCGCTGGCCGCCGGCGCCCCCGCCTCCGAGCTCTTCCACGAGCACGTGCTCGCGATGGACGCGCTGCTCACCCACT GGCACGGCCAGAAATGGGTGGACCTCCCCGGGAAGGTGCGCTGCCGACGAGCCGACGGCCGGCTGCGCCTCGGCCCGGCT GGATGA
Upstream 100 bases:
>100_bases CGGTCTGGGAGCGGCCCGAGAACCTGCCGTCGAAGGCCGAGATCGCGGACCCACGAGCCTGGATCAGCCGGGTGCTGTGA CCGTCCCACGGGCCTGACCC
Downstream 100 bases:
>100_bases GAAGTCTCAGGTTCCGCCTGCTCCGACCGATGTTCCGCGTCAGAATCGCAATCGACGTCCGTCTGGTCAGCGTGCCGACT GAAACGAGGAACTCCATGTC
Product: tRNA(Ile)-lysidine synthetase
Products: NA
Alternate protein names: tRNA(Ile)-2-lysyl-cytidine synthase; tRNA(Ile)-lysidine synthetase [H]
Number of amino acids: Translated: 321; Mature: 320
Protein sequence:
>321_residues MSLHPAIAAVRLAVRRALAHVDPGRTVVVACSGGADSLALLAATVFEGRRAGWRVVGATVDHGLQPGSADHAAHVVRQMA ALGADETVAATVHVEAAGQGPEAAARQARYAVLDQLAERFDADAVLLGHTRDDQAETVLLGLARGSGGRSLAGMRRSFDR FVRPLLDLSRADTATACQVAGIEFWSDPHNEDPAFTRVRVRRSVLPVLEDQLGPGVAEALARTADQLRADMDLLDDAAEA AYQRLRDLPVDGLLAEPGPIRRRVLRLAALAAGAPASELFHEHVLAMDALLTHWHGQKWVDLPGKVRCRRADGRLRLGPA G
Sequences:
>Translated_321_residues MSLHPAIAAVRLAVRRALAHVDPGRTVVVACSGGADSLALLAATVFEGRRAGWRVVGATVDHGLQPGSADHAAHVVRQMA ALGADETVAATVHVEAAGQGPEAAARQARYAVLDQLAERFDADAVLLGHTRDDQAETVLLGLARGSGGRSLAGMRRSFDR FVRPLLDLSRADTATACQVAGIEFWSDPHNEDPAFTRVRVRRSVLPVLEDQLGPGVAEALARTADQLRADMDLLDDAAEA AYQRLRDLPVDGLLAEPGPIRRRVLRLAALAAGAPASELFHEHVLAMDALLTHWHGQKWVDLPGKVRCRRADGRLRLGPA G >Mature_320_residues SLHPAIAAVRLAVRRALAHVDPGRTVVVACSGGADSLALLAATVFEGRRAGWRVVGATVDHGLQPGSADHAAHVVRQMAA LGADETVAATVHVEAAGQGPEAAARQARYAVLDQLAERFDADAVLLGHTRDDQAETVLLGLARGSGGRSLAGMRRSFDRF VRPLLDLSRADTATACQVAGIEFWSDPHNEDPAFTRVRVRRSVLPVLEDQLGPGVAEALARTADQLRADMDLLDDAAEAA YQRLRDLPVDGLLAEPGPIRRRVLRLAALAAGAPASELFHEHVLAMDALLTHWHGQKWVDLPGKVRCRRADGRLRLGPAG
Specific function: Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionin
COG id: COG0037
COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tRNA(Ile)-lysidine synthase family [H]
Homologues:
Organism=Escherichia coli, GI1786386, Length=208, Percent_Identity=32.2115384615385, Blast_Score=77, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012094 - InterPro: IPR012795 - InterPro: IPR014729 - InterPro: IPR011063 [H]
Pfam domain/function: PF01171 ATP_bind_3 [H]
EC number: NA
Molecular weight: Translated: 34192; Mature: 34061
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLHPAIAAVRLAVRRALAHVDPGRTVVVACSGGADSLALLAATVFEGRRAGWRVVGATV CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEHH DHGLQPGSADHAAHVVRQMAALGADETVAATVHVEAAGQGPEAAARQARYAVLDQLAERF HCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH DADAVLLGHTRDDQAETVLLGLARGSGGRSLAGMRRSFDRFVRPLLDLSRADTATACQVA CCCEEEEECCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GIEFWSDPHNEDPAFTRVRVRRSVLPVLEDQLGPGVAEALARTADQLRADMDLLDDAAEA CCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AYQRLRDLPVDGLLAEPGPIRRRVLRLAALAAGAPASELFHEHVLAMDALLTHWHGQKWV HHHHHHCCCCCCEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEE DLPGKVRCRRADGRLRLGPAG CCCCCEEEEECCCEEECCCCC >Mature Secondary Structure SLHPAIAAVRLAVRRALAHVDPGRTVVVACSGGADSLALLAATVFEGRRAGWRVVGATV CCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEHH DHGLQPGSADHAAHVVRQMAALGADETVAATVHVEAAGQGPEAAARQARYAVLDQLAERF HCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHH DADAVLLGHTRDDQAETVLLGLARGSGGRSLAGMRRSFDRFVRPLLDLSRADTATACQVA CCCEEEEECCCCCCHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH GIEFWSDPHNEDPAFTRVRVRRSVLPVLEDQLGPGVAEALARTADQLRADMDLLDDAAEA CCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH AYQRLRDLPVDGLLAEPGPIRRRVLRLAALAAGAPASELFHEHVLAMDALLTHWHGQKWV HHHHHHCCCCCCEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEE DLPGKVRCRRADGRLRLGPAG CCCCCEEEEECCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA