| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714704
Identifier: 119714704
GI number: 119714704
Start: 471452
End: 472498
Strand: Direct
Name: 119714704
Synonym: Noca_0440
Alternate gene names: NA
Gene position: 471452-472498 (Clockwise)
Preceding gene: 119714703
Following gene: 119714705
Centisome position: 9.46
GC content: 73.07
Gene sequence:
>1047_bases ATGAGTAAGCACTCCGGCCCCGAGCTGGTCGACTGGGACCTCGCGGTCGCCCTCGGCTCCCGGATCGCGGGCGACGGCCC GGTCGTGGACCGCCGTACCGCGGACGCCGTGGTCGCCGAGCTGCGCGCCGACGCCGATCGGTCGACGGGCCTGGTCCGTG CGCACACCGGGCTGCTCGCCGCCGAGCGGACCGCCCCGGTCCTGGTCGTCGACCGGCCCGGCTGGGTCATCGCCAACGCC GACGGGTTCGCGACGATCCTGGCCCCCGTCGTCGACAAGCTGTCCTCGCGCAAGGGCGAGCCGACCGGGCTGACGAAGGC GATCGGCTCGCGCGTCACCGGGGCCGAGGTCGGCGCGCTGCTGGGCTTCCTGGCCGGGAAGGTGCTCGGCCAGTTCGACC CGTTCCACGCCCCGTCCGGGCGGCTGCTGCTCGTCGCGCCGAACATCGTCCACGTCGAGCGCGAGCTCGGCGTCGTCCCC CGGGACTTCCGGCTCTGGGTGTGCCTGCACGAGGAGACCCACCGGGTGCAGTTCACCGCCACCCCGTGGCTGGCCGACCA CCTGCTGGGAGAGATGCACGCGCTCGCCGAGAGCCTCGAGCCGAGCGGCCTGCTCGACGACGGGTTGACCCGGATCGCCG GGGCCGTCCGGAGCGCTCGCGAGGGTGGCGGCAGCCTCCTGGACCTGATCGGAACCCCGGAGCAGAAGGAGATCGTCGAC CGGGTCACCGGCGTCATGTCCCTGCTCGAGGGCCACGCCGACGTGGTCATGGACGACGTCGGCCCGGGCGTGATCCCGAC GGTGGCCGACATCCGCAAGCGGTTCAACCGCCGCCGCCAGGGCGTCGGGGTACTCGACCGGCTGCTGCGCCGGGTGCTCG GCCTGGACGCCAAGATGGCGCAGTACCGCGACGGCGCGAAGTTCGTCCGTGCGGTCGTCGACAAGGCCGGCATGACCGAG TTCAACGCGGTCTGGGAGCGGCCCGAGAACCTGCCGTCGAAGGCCGAGATCGCGGACCCACGAGCCTGGATCAGCCGGGT GCTGTGA
Upstream 100 bases:
>100_bases CGCCCGAGCCGCCCTGGACGGCGCGACCGGTGCCCTCGCCGGCTGTCGCTGCGGCTGACTTCCTGGCCGGGCGTGTGGCG GACGCGGGTACCGTCACCGC
Downstream 100 bases:
>100_bases CCGTCCCACGGGCCTGACCCATGAGCCTCCACCCCGCGATCGCCGCGGTGCGCCTCGCGGTACGCCGTGCCCTCGCCCAC GTCGACCCGGGTCGGACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 347
Protein sequence:
>348_residues MSKHSGPELVDWDLAVALGSRIAGDGPVVDRRTADAVVAELRADADRSTGLVRAHTGLLAAERTAPVLVVDRPGWVIANA DGFATILAPVVDKLSSRKGEPTGLTKAIGSRVTGAEVGALLGFLAGKVLGQFDPFHAPSGRLLLVAPNIVHVERELGVVP RDFRLWVCLHEETHRVQFTATPWLADHLLGEMHALAESLEPSGLLDDGLTRIAGAVRSAREGGGSLLDLIGTPEQKEIVD RVTGVMSLLEGHADVVMDDVGPGVIPTVADIRKRFNRRRQGVGVLDRLLRRVLGLDAKMAQYRDGAKFVRAVVDKAGMTE FNAVWERPENLPSKAEIADPRAWISRVL
Sequences:
>Translated_348_residues MSKHSGPELVDWDLAVALGSRIAGDGPVVDRRTADAVVAELRADADRSTGLVRAHTGLLAAERTAPVLVVDRPGWVIANA DGFATILAPVVDKLSSRKGEPTGLTKAIGSRVTGAEVGALLGFLAGKVLGQFDPFHAPSGRLLLVAPNIVHVERELGVVP RDFRLWVCLHEETHRVQFTATPWLADHLLGEMHALAESLEPSGLLDDGLTRIAGAVRSAREGGGSLLDLIGTPEQKEIVD RVTGVMSLLEGHADVVMDDVGPGVIPTVADIRKRFNRRRQGVGVLDRLLRRVLGLDAKMAQYRDGAKFVRAVVDKAGMTE FNAVWERPENLPSKAEIADPRAWISRVL >Mature_347_residues SKHSGPELVDWDLAVALGSRIAGDGPVVDRRTADAVVAELRADADRSTGLVRAHTGLLAAERTAPVLVVDRPGWVIANAD GFATILAPVVDKLSSRKGEPTGLTKAIGSRVTGAEVGALLGFLAGKVLGQFDPFHAPSGRLLLVAPNIVHVERELGVVPR DFRLWVCLHEETHRVQFTATPWLADHLLGEMHALAESLEPSGLLDDGLTRIAGAVRSAREGGGSLLDLIGTPEQKEIVDR VTGVMSLLEGHADVVMDDVGPGVIPTVADIRKRFNRRRQGVGVLDRLLRRVLGLDAKMAQYRDGAKFVRAVVDKAGMTEF NAVWERPENLPSKAEIADPRAWISRVL
Specific function: Unknown
COG id: COG5282
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37416; Mature: 37285
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKHSGPELVDWDLAVALGSRIAGDGPVVDRRTADAVVAELRADADRSTGLVRAHTGLLA CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHCHHE AERTAPVLVVDRPGWVIANADGFATILAPVVDKLSSRKGEPTGLTKAIGSRVTGAEVGAL ECCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHH LGFLAGKVLGQFDPFHAPSGRLLLVAPNIVHVERELGVVPRDFRLWVCLHEETHRVQFTA HHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEHHHCCCCCCCEEEEEEEECCCCEEEEEE TPWLADHLLGEMHALAESLEPSGLLDDGLTRIAGAVRSAREGGGSLLDLIGTPEQKEIVD CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHCCCCHHHHHHH RVTGVMSLLEGHADVVMDDVGPGVIPTVADIRKRFNRRRQGVGVLDRLLRRVLGLDAKMA HHHHHHHHHHCCHHEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHH QYRDGAKFVRAVVDKAGMTEFNAVWERPENLPSKAEIADPRAWISRVL HHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure SKHSGPELVDWDLAVALGSRIAGDGPVVDRRTADAVVAELRADADRSTGLVRAHTGLLA CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEHHHCHHE AERTAPVLVVDRPGWVIANADGFATILAPVVDKLSSRKGEPTGLTKAIGSRVTGAEVGAL ECCCCCEEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCHHHHHHH LGFLAGKVLGQFDPFHAPSGRLLLVAPNIVHVERELGVVPRDFRLWVCLHEETHRVQFTA HHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEHHHCCCCCCCEEEEEEEECCCCEEEEEE TPWLADHLLGEMHALAESLEPSGLLDDGLTRIAGAVRSAREGGGSLLDLIGTPEQKEIVD CHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEHHCCCCHHHHHHH RVTGVMSLLEGHADVVMDDVGPGVIPTVADIRKRFNRRRQGVGVLDRLLRRVLGLDAKMA HHHHHHHHHHCCHHEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHH QYRDGAKFVRAVVDKAGMTEFNAVWERPENLPSKAEIADPRAWISRVL HHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA