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The map label for this gene is ynjA [H]

Identifier: 119714695

GI number: 119714695

Start: 460688

End: 461275

Strand: Direct

Name: ynjA [H]

Synonym: Noca_0431

Alternate gene names: 119714695

Gene position: 460688-461275 (Clockwise)

Preceding gene: 119714692

Following gene: 119714696

Centisome position: 9.24

GC content: 69.22

Gene sequence:

>588_bases
ATGCCCAGCACGTTCCGCATCCCGAAGGCCACGATCACCGGCCTGTACGGCAAGGTGGTCTCGGCGTACGCCCGCCGCAC
GTTCGGGGAGATCCCTGACGGCCTCTACGTCTACTTCCACCACAAGCCGCTGATGAGGGCCGTGGTCGGCTTCGAGGGCA
AGGTCGCGAAGTGGGGCGCGCTCGACCCCACGCTGAAGTCCTACGCCGAGCTGGCCAGTGCCGGGACCATCGGCTGCAGC
TGGTGCCTGGACTTCGGCTACTTCAAGGCGCACGACGAGGGCGTGGACCTGGCGAAGGTCAGCGAGGTCCCGCGGTGGCG
GGAGTCCGACGTGTTCACGCCGCTGGAGCGCGAGGTCCTCGAGTACGCCGAGGCGATGACCGCCACGCCGCCGACCGTCA
CCGACGCGATGGTCGCGCGGCTCGTGGAGCAGCTCGGCACCCCCGCCGTCGTCGAGCTGACCCAGATCGTGGCCCTGGAG
AACATGCGCTCGCGGTTCAACTCCGCCGCGGGCCTGCAGAGCCAGGGATACTCGGATGTGTGCGAGCTGCCGCTCGCCGT
ACCGTCGGGAGACGTGAGGCCCGCATGA

Upstream 100 bases:

>100_bases
TCATGGCTCGCAGCCTCCCACAGCGGGGGTTGTCACAGCGGCGCGGTGGCCGGTGTCTGGTGGGTGACGGACCGAGACGA
GTCCACGAAGGAGAGAGCAG

Downstream 100 bases:

>100_bases
ACGCCACCGATTCCACCGACGTCTTCGTCGACCACCGCAACCTGCTCTTCACGGTCGCCTACGAGATGCTCGGCTCGGCC
GCGGACGCCGAGGACGTGCT

Product: alkylhydroperoxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 194

Protein sequence:

>195_residues
MPSTFRIPKATITGLYGKVVSAYARRTFGEIPDGLYVYFHHKPLMRAVVGFEGKVAKWGALDPTLKSYAELASAGTIGCS
WCLDFGYFKAHDEGVDLAKVSEVPRWRESDVFTPLEREVLEYAEAMTATPPTVTDAMVARLVEQLGTPAVVELTQIVALE
NMRSRFNSAAGLQSQGYSDVCELPLAVPSGDVRPA

Sequences:

>Translated_195_residues
MPSTFRIPKATITGLYGKVVSAYARRTFGEIPDGLYVYFHHKPLMRAVVGFEGKVAKWGALDPTLKSYAELASAGTIGCS
WCLDFGYFKAHDEGVDLAKVSEVPRWRESDVFTPLEREVLEYAEAMTATPPTVTDAMVARLVEQLGTPAVVELTQIVALE
NMRSRFNSAAGLQSQGYSDVCELPLAVPSGDVRPA
>Mature_194_residues
PSTFRIPKATITGLYGKVVSAYARRTFGEIPDGLYVYFHHKPLMRAVVGFEGKVAKWGALDPTLKSYAELASAGTIGCSW
CLDFGYFKAHDEGVDLAKVSEVPRWRESDVFTPLEREVLEYAEAMTATPPTVTDAMVARLVEQLGTPAVVELTQIVALEN
MRSRFNSAAGLQSQGYSDVCELPLAVPSGDVRPA

Specific function: Unknown

COG id: COG2128

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv2313c [H]

Homologues:

Organism=Escherichia coli, GI1788050, Length=169, Percent_Identity=34.9112426035503, Blast_Score=95, Evalue=3e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003779 [H]

Pfam domain/function: PF02627 CMD [H]

EC number: NA

Molecular weight: Translated: 21278; Mature: 21146

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSTFRIPKATITGLYGKVVSAYARRTFGEIPDGLYVYFHHKPLMRAVVGFEGKVAKWGA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCCCCCCCCC
LDPTLKSYAELASAGTIGCSWCLDFGYFKAHDEGVDLAKVSEVPRWRESDVFTPLEREVL
CCHHHHHHHHHHHCCCCHHHHHHHCCHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHH
EYAEAMTATPPTVTDAMVARLVEQLGTPAVVELTQIVALENMRSRFNSAAGLQSQGYSDV
HHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
CELPLAVPSGDVRPA
HHCCCCCCCCCCCCC
>Mature Secondary Structure 
PSTFRIPKATITGLYGKVVSAYARRTFGEIPDGLYVYFHHKPLMRAVVGFEGKVAKWGA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHCCCCCCCCCCC
LDPTLKSYAELASAGTIGCSWCLDFGYFKAHDEGVDLAKVSEVPRWRESDVFTPLEREVL
CCHHHHHHHHHHHCCCCHHHHHHHCCHHCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHH
EYAEAMTATPPTVTDAMVARLVEQLGTPAVVELTQIVALENMRSRFNSAAGLQSQGYSDV
HHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
CELPLAVPSGDVRPA
HHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]