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The map label for this gene is fecI [C]

Identifier: 119714696

GI number: 119714696

Start: 461272

End: 462150

Strand: Direct

Name: fecI [C]

Synonym: Noca_0432

Alternate gene names: 119714696

Gene position: 461272-462150 (Clockwise)

Preceding gene: 119714695

Following gene: 119714697

Centisome position: 9.25

GC content: 72.01

Gene sequence:

>879_bases
ATGAACGCCACCGATTCCACCGACGTCTTCGTCGACCACCGCAACCTGCTCTTCACGGTCGCCTACGAGATGCTCGGCTC
GGCCGCGGACGCCGAGGACGTGCTGCAGGAGACCTGGCTGCGCTGGGTCGAGGTCGACCGCGAGGAGGTGCGCGAGGCGC
GCGCCTACCTGGTGCGGATCGCCACCCGGCTCGCGCTGAACCGGATGCGCACGAACGCCCGGCGCCGGGAGTCGTACGTC
GGACCGTGGCTCCCCGAGCCGCTGCTCACCACCCCGGACGTGGCGGAGGACGTCGAGCTCGCCGACAGCGTCTCCCTGGC
GATGCTCACGCTGCTCGAGACGCTCGGCCCGACCGAGCGCGCGGTGTTCGTGCTGCGCGAGGTCTTCGACTTCGGCTACG
ACGAGATCGCGGCCGCGGTCGACAAGACGCCGGCCGCCGTACGCCAGATCGCGCACCGCGCCCGCGGACACGTCGCCGAG
CGGCGGCCGCGGGCCGAGGCCACCCGCTCCGAGCGGGAGCACGTGATGGCGACGTTCCTCGCTGCGGTCGCGACCGGCGA
CATCCAGAGCCTGATGGACGTGCTCGCCCCCGACGTCGTGCTGGTCACCGACGGCGGAGGGGTCAAGAAGGCCGCGCTCC
GCCCGATCCTGGGCCGTGACAAGGTGGTCCGCTTCCTCGGTGCGGTCTCCGAGGGCCTCGACGCCGTCGCCGACGTGGTC
GTCGTCAACGGCGCTCCCGCGCTGCGGATCGTGCTGGACGGCGAGCTCGACACGGTCGCCTCGATGGTCGTCGAGGACGG
CCTGGTCACCGGCCTCTACGTCGTACGCAACCCGGCCAAGCTGGCCCGGCTCGACGCCGTCGTCACTCTGACCCGTTGA

Upstream 100 bases:

>100_bases
TGCGCTCGCGGTTCAACTCCGCCGCGGGCCTGCAGAGCCAGGGATACTCGGATGTGTGCGAGCTGCCGCTCGCCGTACCG
TCGGGAGACGTGAGGCCCGC

Downstream 100 bases:

>100_bases
CCCCGGTTCGGCCAGCCGCGCAGCTGTAACGCCCGTTTACCCCACCTACCGCCGCCGCTGCAGCACGCTCGGGACAAGGG
GTAAACGGGCGTTACAGCGA

Product: sigma-70 region 2 domain-containing protein

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; ECF Subfamily RNA Polymerase Sigma-24 Factor; Sigma Factor; RNA Polymerase Sigma Factor SigJ; RNA Polymerase ECF-Subfamily Sigma Factor; RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma Factor; Sigma-; ECF-Sigma Factor; RNA Polymerase Sigma-70 Factor ECF Subfamily; Sigma-70 Region 2 Domain-Containing Protein; RNA Polymerase Sigma-70 Factor; ECF Family RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor Sigma-70 Family Protein; RNA Polymerase ECF-Type Sigma Factor; Sigma-70 Factor; Sigma Factor Sigma; RNA Polymerase; DNA-Directed RNA Polymeracialized Sigma Subunit; ECF-Family Protein RNA Polymerase Sigma Factor; Sigma-70 Family RNA Polymerase Sigma Factor; Sigma-70 Family RNA Polymerase; RNA Polymerase Sigma-24 Factor Protein; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-70 Factor Family; RNA Polymerase Sigma-24 Factor; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; RNA Polymerase Sigma-70 Factor Protein; RNA Polymerase Sigma Subunit; AlteRNAtive RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor Sigma-70 Family; RNA Polymerase Sigma-70-Like Factor; ECF Subfamily RNA Polymerase Sigma-

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MNATDSTDVFVDHRNLLFTVAYEMLGSAADAEDVLQETWLRWVEVDREEVREARAYLVRIATRLALNRMRTNARRRESYV
GPWLPEPLLTTPDVAEDVELADSVSLAMLTLLETLGPTERAVFVLREVFDFGYDEIAAAVDKTPAAVRQIAHRARGHVAE
RRPRAEATRSEREHVMATFLAAVATGDIQSLMDVLAPDVVLVTDGGGVKKAALRPILGRDKVVRFLGAVSEGLDAVADVV
VVNGAPALRIVLDGELDTVASMVVEDGLVTGLYVVRNPAKLARLDAVVTLTR

Sequences:

>Translated_292_residues
MNATDSTDVFVDHRNLLFTVAYEMLGSAADAEDVLQETWLRWVEVDREEVREARAYLVRIATRLALNRMRTNARRRESYV
GPWLPEPLLTTPDVAEDVELADSVSLAMLTLLETLGPTERAVFVLREVFDFGYDEIAAAVDKTPAAVRQIAHRARGHVAE
RRPRAEATRSEREHVMATFLAAVATGDIQSLMDVLAPDVVLVTDGGGVKKAALRPILGRDKVVRFLGAVSEGLDAVADVV
VVNGAPALRIVLDGELDTVASMVVEDGLVTGLYVVRNPAKLARLDAVVTLTR
>Mature_292_residues
MNATDSTDVFVDHRNLLFTVAYEMLGSAADAEDVLQETWLRWVEVDREEVREARAYLVRIATRLALNRMRTNARRRESYV
GPWLPEPLLTTPDVAEDVELADSVSLAMLTLLETLGPTERAVFVLREVFDFGYDEIAAAVDKTPAAVRQIAHRARGHVAE
RRPRAEATRSEREHVMATFLAAVATGDIQSLMDVLAPDVVLVTDGGGVKKAALRPILGRDKVVRFLGAVSEGLDAVADVV
VVNGAPALRIVLDGELDTVASMVVEDGLVTGLYVVRNPAKLARLDAVVTLTR

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31937; Mature: 31937

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNATDSTDVFVDHRNLLFTVAYEMLGSAADAEDVLQETWLRWVEVDREEVREARAYLVRI
CCCCCCCCEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ATRLALNRMRTNARRRESYVGPWLPEPLLTTPDVAEDVELADSVSLAMLTLLETLGPTER
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
AVFVLREVFDFGYDEIAAAVDKTPAAVRQIAHRARGHVAERRPRAEATRSEREHVMATFL
HHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHH
AAVATGDIQSLMDVLAPDVVLVTDGGGVKKAALRPILGRDKVVRFLGAVSEGLDAVADVV
HHHHHCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
VVNGAPALRIVLDGELDTVASMVVEDGLVTGLYVVRNPAKLARLDAVVTLTR
EECCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHEEECC
>Mature Secondary Structure
MNATDSTDVFVDHRNLLFTVAYEMLGSAADAEDVLQETWLRWVEVDREEVREARAYLVRI
CCCCCCCCEEEECHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
ATRLALNRMRTNARRRESYVGPWLPEPLLTTPDVAEDVELADSVSLAMLTLLETLGPTER
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
AVFVLREVFDFGYDEIAAAVDKTPAAVRQIAHRARGHVAERRPRAEATRSEREHVMATFL
HHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHH
AAVATGDIQSLMDVLAPDVVLVTDGGGVKKAALRPILGRDKVVRFLGAVSEGLDAVADVV
HHHHHCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
VVNGAPALRIVLDGELDTVASMVVEDGLVTGLYVVRNPAKLARLDAVVTLTR
EECCCCEEEEEECCCHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA