Click here to switch to the map view.

The map label for this gene is ycbL [C]

Identifier: 119714692

GI number: 119714692

Start: 458144

End: 459244

Strand: Direct

Name: ycbL [C]

Synonym: Noca_0428

Alternate gene names: 119714692

Gene position: 458144-459244 (Clockwise)

Preceding gene: 119714691

Following gene: 119714695

Centisome position: 9.19

GC content: 73.21

Gene sequence:

>1101_bases
GTGACGCCATCCACCTCCCCAGCCTCCACGCCGACGGCGTTCGCCGTCTCGCCCGACTCCGGCGAGCACTGGAGCAAGGC
GGGAGCCTGGCAGGTCGCCGACGGCATCCACCGGATCCCGCTGCCACTGCCGATGGACGGGCTCAAGGCGATCAACGTCT
ACGTGATCGAGAGCGCCGACGGGCTGACCCTGATCGACGGCGGCTGGGCGATCGACGTCGCCCGCGACCTGCTGGAGCGG
TGCCTGCGCCAGGTCGGCTACGGGTTCGGCGACATCCGCCGGTTCCTGGTCACCCACGTCCACCGCGACCACTTCACGCT
CGCCACCGTGCTCGGCCACGAGTACGGCGCGGACGTGGCGCTCGGCCTCGGCGAGAAGCCGGCCCTGGACCTGCTCAACG
ACCGGCTCCTCGACGAGAGCCCGTTCCTCGACGTGCTGCGCACGGCCGGCGCGAACGCGATCGCGGACCTCTGGGCGGCC
GGCGGCGAGCGCCCGGACCCGGCGATGTGGCTGCTCCCCGACACCTGGCTCGAGGGCGACCACGAGATCGAGGTCGGCGT
CCGCACGCTCGACGCGGTCCACACGCCCGGGCACACCCCGGGGCACTACGTCTTCGCCGAGCAGGCGGCCGGGCTGCTGT
TCGCCGGTGACCACGTGCTGCCGACGATCACCCCGTCGATCGGCTTCACGGTCCCGCCGACGCCCGACCCGCTCGGCGAC
TTCATGGCCTCGCTGACCAAGGTGCGCGCGCTGCCCGACCTGAAGGTGCTCCCGGCGCACGGTCCGGTGGCGCCGTCCTC
GCACGCCCGCGCCGACGAGCTGCTCTCCTTCCACGACCGGCGCCTCGAGCAGAGCCTGGCCGCGATCGCCGAGGAGCCGG
GCACCGGGTTCACGGTCGCCCACCAGCTCGCGTGGACGCGGCACGAGAAGGCGTACGACGAGCTCGACCTGTTCAGCCAG
GGCATGGCCGCGATGGAGATCAAGGCGCACCTCGAGCTGCTCGTCGCCCGCGGTCAGGCGACCCGCGCGGACACCCCCGA
GGGCGTGCTGTTCTCGGCGGTCCCCGCCGGAGCGCCCGGCGAGGACACCCTCAGCGGCTGA

Upstream 100 bases:

>100_bases
CGGGCAGTATGTGACCGGCAAGCTGCTCGAGATCGACGGCGGCATCCAGCAGCCGACCCTCGACCTCGGGTTCCCCGACG
TCGGGTCGTAGGGTCCGTGC

Downstream 100 bases:

>100_bases
GCCGCATCGGGGTGTGCGGGATCCCGTCCTCGAGGAACTCCGGGCCCGACACCTCGAACCCGAACGTCGCGTACCACGGC
GCCAGCGGCGACTGCGCGTC

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase-Like Protein; Beta-Lactamase-Like; Metallo-Beta-Lactamase Superfamily Protein; Beta Lactamase; Zn-Dependent Hydrolase; Zn-Dependent Hydrolase Glyoxylase; Metallo-Beta-Lactamase Superfamily; Metallo-Beta-Lactamase; Zinc Metallohydrolase; Zinc Metallohydrolase Glyoxalase II Family; Beta-Lactamase Class B; Hydrolase Protein; Metallo-Beta-Lactamase Family Protein / Hydrolase; Beta-Lactamase Family Protein; Metallo-Dependent Enzymatic Protein; Metallo-Beta-Lactamase Family Hydrolase; Metallo-Beta-Lactamase Domain Protein; Hydrolase; AMP-Dependent Synthetase And Ligase; Metal Dependent Hydrolase; Metallo-Hydrolase/Oxidoreductase Superfamily Protein; Zn-Dependent Hydrolase Including Glyoxylase-Like Protein

Number of amino acids: Translated: 366; Mature: 365

Protein sequence:

>366_residues
MTPSTSPASTPTAFAVSPDSGEHWSKAGAWQVADGIHRIPLPLPMDGLKAINVYVIESADGLTLIDGGWAIDVARDLLER
CLRQVGYGFGDIRRFLVTHVHRDHFTLATVLGHEYGADVALGLGEKPALDLLNDRLLDESPFLDVLRTAGANAIADLWAA
GGERPDPAMWLLPDTWLEGDHEIEVGVRTLDAVHTPGHTPGHYVFAEQAAGLLFAGDHVLPTITPSIGFTVPPTPDPLGD
FMASLTKVRALPDLKVLPAHGPVAPSSHARADELLSFHDRRLEQSLAAIAEEPGTGFTVAHQLAWTRHEKAYDELDLFSQ
GMAAMEIKAHLELLVARGQATRADTPEGVLFSAVPAGAPGEDTLSG

Sequences:

>Translated_366_residues
MTPSTSPASTPTAFAVSPDSGEHWSKAGAWQVADGIHRIPLPLPMDGLKAINVYVIESADGLTLIDGGWAIDVARDLLER
CLRQVGYGFGDIRRFLVTHVHRDHFTLATVLGHEYGADVALGLGEKPALDLLNDRLLDESPFLDVLRTAGANAIADLWAA
GGERPDPAMWLLPDTWLEGDHEIEVGVRTLDAVHTPGHTPGHYVFAEQAAGLLFAGDHVLPTITPSIGFTVPPTPDPLGD
FMASLTKVRALPDLKVLPAHGPVAPSSHARADELLSFHDRRLEQSLAAIAEEPGTGFTVAHQLAWTRHEKAYDELDLFSQ
GMAAMEIKAHLELLVARGQATRADTPEGVLFSAVPAGAPGEDTLSG
>Mature_365_residues
TPSTSPASTPTAFAVSPDSGEHWSKAGAWQVADGIHRIPLPLPMDGLKAINVYVIESADGLTLIDGGWAIDVARDLLERC
LRQVGYGFGDIRRFLVTHVHRDHFTLATVLGHEYGADVALGLGEKPALDLLNDRLLDESPFLDVLRTAGANAIADLWAAG
GERPDPAMWLLPDTWLEGDHEIEVGVRTLDAVHTPGHTPGHYVFAEQAAGLLFAGDHVLPTITPSIGFTVPPTPDPLGDF
MASLTKVRALPDLKVLPAHGPVAPSSHARADELLSFHDRRLEQSLAAIAEEPGTGFTVAHQLAWTRHEKAYDELDLFSQG
MAAMEIKAHLELLVARGQATRADTPEGVLFSAVPAGAPGEDTLSG

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39119; Mature: 38987

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPSTSPASTPTAFAVSPDSGEHWSKAGAWQVADGIHRIPLPLPMDGLKAINVYVIESAD
CCCCCCCCCCCEEEEECCCCCCCHHHCCCCHHHCCCEECCCCCCCCCCEEEEEEEEECCC
GLTLIDGGWAIDVARDLLERCLRQVGYGFGDIRRFLVTHVHRDHFTLATVLGHEYGADVA
CEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEE
LGLGEKPALDLLNDRLLDESPFLDVLRTAGANAIADLWAAGGERPDPAMWLLPDTWLEGD
ECCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEECCHHHCCCC
HEIEVGVRTLDAVHTPGHTPGHYVFAEQAAGLLFAGDHVLPTITPSIGFTVPPTPDPLGD
CEEEEHHHHHHHHCCCCCCCCCEEEHHCCCCEEEECCCCCCEECCCCCCCCCCCCCHHHH
FMASLTKVRALPDLKVLPAHGPVAPSSHARADELLSFHDRRLEQSLAAIAEEPGTGFTVA
HHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
HQLAWTRHEKAYDELDLFSQGMAAMEIKAHLELLVARGQATRADTPEGVLFSAVPAGAPG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCC
EDTLSG
CCCCCC
>Mature Secondary Structure 
TPSTSPASTPTAFAVSPDSGEHWSKAGAWQVADGIHRIPLPLPMDGLKAINVYVIESAD
CCCCCCCCCCEEEEECCCCCCCHHHCCCCHHHCCCEECCCCCCCCCCEEEEEEEEECCC
GLTLIDGGWAIDVARDLLERCLRQVGYGFGDIRRFLVTHVHRDHFTLATVLGHEYGADVA
CEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEE
LGLGEKPALDLLNDRLLDESPFLDVLRTAGANAIADLWAAGGERPDPAMWLLPDTWLEGD
ECCCCCCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCCEEECCHHHCCCC
HEIEVGVRTLDAVHTPGHTPGHYVFAEQAAGLLFAGDHVLPTITPSIGFTVPPTPDPLGD
CEEEEHHHHHHHHCCCCCCCCCEEEHHCCCCEEEECCCCCCEECCCCCCCCCCCCCHHHH
FMASLTKVRALPDLKVLPAHGPVAPSSHARADELLSFHDRRLEQSLAAIAEEPGTGFTVA
HHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
HQLAWTRHEKAYDELDLFSQGMAAMEIKAHLELLVARGQATRADTPEGVLFSAVPAGAPG
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCC
EDTLSG
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA