| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714690
Identifier: 119714690
GI number: 119714690
Start: 456145
End: 457266
Strand: Direct
Name: 119714690
Synonym: Noca_0426
Alternate gene names: NA
Gene position: 456145-457266 (Clockwise)
Preceding gene: 119714689
Following gene: 119714691
Centisome position: 9.15
GC content: 71.21
Gene sequence:
>1122_bases ATGGTCTCCACAGGTTCGGCCACCGAGCGCACGCCACCTCGCCCGCCGCTGAGGGTCGTCGTCTGGTCCACCGGGACCGT CGGACGGCACGCGATCGCGGGCATCGACGCCCATCCCGACCTCGAGCTGGTCGGGGTGTGGGTCTCCAACCCGGACAAGG CCGGCAAGGACGCCGGCGAGCTGGCCGGCCTCGGCCGTGAGCTGGGGGTGTGCGCCACCACGGACAAGCAGCAGCTGCTG GCGCTGCGACCCGACGCGATCGTGCACACCGCGATGACCGACGACCGGGTCTTCGAGGCGATCGACGACCTCGTCGACTT CCTCGAGGCGGGCGTCAACGTCACCTCGAGCGGGCCGGTGCTGCTGCAGTGGCCGGAGCAGATCCTGCCGCCCGAGCTGA TGGAGCGGATCACCAAGGCCGGTGAGCGCACCGGCGCCAGCCTGCACGTCAACGGCATCGACCCCGGCTTCGCCAACGAC GTGCTGCCGCTGACCCTGACCAGCCTGAGTCAGCGCATCGACGAGGTGCGGGTGATGGAGATCTGCGACTACTCGACCTA CTACCAGCCGGTCGTCATGAACGACCTGTTCGGGTTCGGCAAGCCGATGGACCAGCCCGGGTTCCTGTTCGCACCCGGCG TCTTGTCCATGGCCTGGGGCAGCGTGGTCCGGCAGCTCGCGGCCGGCCTCGGGATCACCCTGGACGAGCCGCTGACCGAG GACGTCGACCGCCGGCCCGCGGAGGTCGACACGACGAGCGTCTCGGGGGACGTCGCCGCCGGCACCATGGGCGCGGTCCG GTTCCAGGTGATCGGCAAGGTCGACGGCGTCCCGCGCGTCGTGCTCGACCACATCACCCGGACCGCGCCGGACCAGGTGC CCGAGTGGCCGACGCCGCCGGACGGCGACGGCTGCTACCGGGTCGTCGTCACGGGCGAGCCGTTCCTGCAGCTCGACCTC ACCCACCACGGGGAGAACGGCGACCACAACGTCTCGGGGATGATCGTCACCGCCCAGCGGATCGTGAACGCCGTCCCCGC GGTCGTCGCATCCCCCGGCGGGCTGGTCACCGCGCTCGACCTCCCGCTCGTGACCGGTACGGGCCTGGTGAGCCGCGCAT GA
Upstream 100 bases:
>100_bases CGGTTTCCCCGGTTAACCGGGGAAACCGACGGCGCCGGACGACGCGAGGCCGCCCGCCTCGCCCTTCCCACGGATCTAGA ACATGTTCTAGATTGCCCGC
Downstream 100 bases:
>100_bases GCCACTTCGCCCCCCGAGATCGCTCGCTGCGCTCCCGATTCCGCGGAGGCCCCGAATGATCCTCGACCGCTTCTCGACCG AGGGCCAGGTCGCGATCGTC
Product: dihydrodipicolinate reductase
Products: NA
Alternate protein names: Dihydrodipicolinate Reductase N-Terminus Domain Protein; Dihydrodipicolinate Reductase-Like Protein; (2r 4S)-2 4-Diaminopentanoate Dehydrogenase; Dihydropicolinate Reductase
Number of amino acids: Translated: 373; Mature: 373
Protein sequence:
>373_residues MVSTGSATERTPPRPPLRVVVWSTGTVGRHAIAGIDAHPDLELVGVWVSNPDKAGKDAGELAGLGRELGVCATTDKQQLL ALRPDAIVHTAMTDDRVFEAIDDLVDFLEAGVNVTSSGPVLLQWPEQILPPELMERITKAGERTGASLHVNGIDPGFAND VLPLTLTSLSQRIDEVRVMEICDYSTYYQPVVMNDLFGFGKPMDQPGFLFAPGVLSMAWGSVVRQLAAGLGITLDEPLTE DVDRRPAEVDTTSVSGDVAAGTMGAVRFQVIGKVDGVPRVVLDHITRTAPDQVPEWPTPPDGDGCYRVVVTGEPFLQLDL THHGENGDHNVSGMIVTAQRIVNAVPAVVASPGGLVTALDLPLVTGTGLVSRA
Sequences:
>Translated_373_residues MVSTGSATERTPPRPPLRVVVWSTGTVGRHAIAGIDAHPDLELVGVWVSNPDKAGKDAGELAGLGRELGVCATTDKQQLL ALRPDAIVHTAMTDDRVFEAIDDLVDFLEAGVNVTSSGPVLLQWPEQILPPELMERITKAGERTGASLHVNGIDPGFAND VLPLTLTSLSQRIDEVRVMEICDYSTYYQPVVMNDLFGFGKPMDQPGFLFAPGVLSMAWGSVVRQLAAGLGITLDEPLTE DVDRRPAEVDTTSVSGDVAAGTMGAVRFQVIGKVDGVPRVVLDHITRTAPDQVPEWPTPPDGDGCYRVVVTGEPFLQLDL THHGENGDHNVSGMIVTAQRIVNAVPAVVASPGGLVTALDLPLVTGTGLVSRA >Mature_373_residues MVSTGSATERTPPRPPLRVVVWSTGTVGRHAIAGIDAHPDLELVGVWVSNPDKAGKDAGELAGLGRELGVCATTDKQQLL ALRPDAIVHTAMTDDRVFEAIDDLVDFLEAGVNVTSSGPVLLQWPEQILPPELMERITKAGERTGASLHVNGIDPGFAND VLPLTLTSLSQRIDEVRVMEICDYSTYYQPVVMNDLFGFGKPMDQPGFLFAPGVLSMAWGSVVRQLAAGLGITLDEPLTE DVDRRPAEVDTTSVSGDVAAGTMGAVRFQVIGKVDGVPRVVLDHITRTAPDQVPEWPTPPDGDGCYRVVVTGEPFLQLDL THHGENGDHNVSGMIVTAQRIVNAVPAVVASPGGLVTALDLPLVTGTGLVSRA
Specific function: Unknown
COG id: COG3804
COG function: function code S; Uncharacterized conserved protein related to dihydrodipicolinate reductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39551; Mature: 39551
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS00300 SRP54
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSTGSATERTPPRPPLRVVVWSTGTVGRHAIAGIDAHPDLELVGVWVSNPDKAGKDAGE CCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCEEEEEEEECCCCCCCCCHHH LAGLGRELGVCATTDKQQLLALRPDAIVHTAMTDDRVFEAIDDLVDFLEAGVNVTSSGPV HHHCCHHCCEEECCCHHHHEEECCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCE LLQWPEQILPPELMERITKAGERTGASLHVNGIDPGFANDVLPLTLTSLSQRIDEVRVME EEECCHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ICDYSTYYQPVVMNDLFGFGKPMDQPGFLFAPGVLSMAWGSVVRQLAAGLGITLDEPLTE HHCCCHHCCHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCEECCCCHH DVDRRPAEVDTTSVSGDVAAGTMGAVRFQVIGKVDGVPRVVLDHITRTAPDQVPEWPTPP HHHCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCC DGDGCYRVVVTGEPFLQLDLTHHGENGDHNVSGMIVTAQRIVNAVPAVVASPGGLVTALD CCCCEEEEEEECCCEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEE LPLVTGTGLVSRA CCEEECCCHHCCC >Mature Secondary Structure MVSTGSATERTPPRPPLRVVVWSTGTVGRHAIAGIDAHPDLELVGVWVSNPDKAGKDAGE CCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCCCEEEEEEEECCCCCCCCCHHH LAGLGRELGVCATTDKQQLLALRPDAIVHTAMTDDRVFEAIDDLVDFLEAGVNVTSSGPV HHHCCHHCCEEECCCHHHHEEECCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCE LLQWPEQILPPELMERITKAGERTGASLHVNGIDPGFANDVLPLTLTSLSQRIDEVRVME EEECCHHCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH ICDYSTYYQPVVMNDLFGFGKPMDQPGFLFAPGVLSMAWGSVVRQLAAGLGITLDEPLTE HHCCCHHCCHHHHHHHHHCCCCCCCCCEEECCHHHHHHHHHHHHHHHHCCCCEECCCCHH DVDRRPAEVDTTSVSGDVAAGTMGAVRFQVIGKVDGVPRVVLDHITRTAPDQVPEWPTPP HHHCCCCCCCCCCCCCCCCCCCHHHEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCCCCC DGDGCYRVVVTGEPFLQLDLTHHGENGDHNVSGMIVTAQRIVNAVPAVVASPGGLVTALD CCCCEEEEEEECCCEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCEEEEEE LPLVTGTGLVSRA CCEEECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA