| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is hemK [H]
Identifier: 119714686
GI number: 119714686
Start: 453119
End: 454018
Strand: Reverse
Name: hemK [H]
Synonym: Noca_0422
Alternate gene names: 119714686
Gene position: 454018-453119 (Counterclockwise)
Preceding gene: 119714693
Following gene: 119714684
Centisome position: 9.11
GC content: 77.44
Gene sequence:
>900_bases GTGCTGACGCTCGGCATGGCAGCATCATCGACCATGGCCGGTCCCGCTCCCGACGACGCCCTCGTCGCGACCTTGCGGGC CGCCGGGTGCGTGTTCGCCGAGGACGAGGCTGCGCTGCTCGCCCGCGAGGCCGGGGACGAGGCCGCGCTGGCGGCGATGG TCGCGCGCCGGGTCGCCGGCGAGCCGCTGGAGCAGGTGCTCGGGTTCGCGGAGTTCCTCGGGCTGCGCGTCGCGGTCGAG CCCGGGGTGTTCGTGCCGCGGCTGCGCACCACGCTGCTGGCCCGCCGGGCGATCCGGGCGCTCGAGCCGGGCGACCTCGC CGTCGACCTGTGCTGCGGCACCGGCGCCATCGGCGTGGCACTGCTCGCGGCGGTCCCGGGCGCCGAGGTGCACGCAGCGG ACATCGACCCGGCCGCGGTGCGCTGCGCCCGACGGAACCTGCCGCCCGACCGGGTCCACGAGGGCGACCTGTACGACGCG CTGCCGGGCGAGCTGCGCGGGCGGGTGGCGGTCGTGGTCGCAAACGCGCCGTACGTCCCGACCGGCGCCATCGCGACGAT GCCGCCCGAGGCGCGCGACCACGAGCACCGGGTGGCGCTCGACGGCGGCGCGGACGGTCTCGAGGTCGCCCGGCGGGTGA TCGCCGGGGCGCGGCCGTGGCTCGCCCCCGGTGGCCGGGTGCTCGTGGAGACGAGCGCCGCCCAGCGCGACCTGGCCGCC GCCCACGTCGTCGCGGCGGGCCTCGACGTCACCGTCGCGTCGGCCGCGGACGTCGACGGCAACGTCGTGATCGGGCGGCT CCACCCCGAGCGACTCAGCCCCGAGCGACTCAGCCCCGAGCAGCTCAGTCCTGGGCAGCTCAGTCCTGGGCAGCTCAGTC CTGGGCGGCCCAGGTGCTGA
Upstream 100 bases:
>100_bases CATCTGGTCGAGCCAGCCGGGGCGCTCGCCACGCCGGGCGGCCACCACCGCCAGGACGGCGACGAGCGCGGCGTACCCGA CCACGATCCAGGTGATCTGG
Downstream 100 bases:
>100_bases CCGTGTCGCGCAGCGGCACCGTGGGCCGGCCGAGCAGCTTCGCGAGGTGCCCGGTCGAGAGGCCGAGCAGCCCGGCGGCG ATGTCCTGGTCGAGGGCGAC
Product: HemK family modification methylase
Products: NA
Alternate protein names: M.MloHemKP [H]
Number of amino acids: Translated: 299; Mature: 299
Protein sequence:
>299_residues MLTLGMAASSTMAGPAPDDALVATLRAAGCVFAEDEAALLAREAGDEAALAAMVARRVAGEPLEQVLGFAEFLGLRVAVE PGVFVPRLRTTLLARRAIRALEPGDLAVDLCCGTGAIGVALLAAVPGAEVHAADIDPAAVRCARRNLPPDRVHEGDLYDA LPGELRGRVAVVVANAPYVPTGAIATMPPEARDHEHRVALDGGADGLEVARRVIAGARPWLAPGGRVLVETSAAQRDLAA AHVVAAGLDVTVASAADVDGNVVIGRLHPERLSPERLSPEQLSPGQLSPGQLSPGRPRC
Sequences:
>Translated_299_residues MLTLGMAASSTMAGPAPDDALVATLRAAGCVFAEDEAALLAREAGDEAALAAMVARRVAGEPLEQVLGFAEFLGLRVAVE PGVFVPRLRTTLLARRAIRALEPGDLAVDLCCGTGAIGVALLAAVPGAEVHAADIDPAAVRCARRNLPPDRVHEGDLYDA LPGELRGRVAVVVANAPYVPTGAIATMPPEARDHEHRVALDGGADGLEVARRVIAGARPWLAPGGRVLVETSAAQRDLAA AHVVAAGLDVTVASAADVDGNVVIGRLHPERLSPERLSPEQLSPGQLSPGQLSPGRPRC >Mature_299_residues MLTLGMAASSTMAGPAPDDALVATLRAAGCVFAEDEAALLAREAGDEAALAAMVARRVAGEPLEQVLGFAEFLGLRVAVE PGVFVPRLRTTLLARRAIRALEPGDLAVDLCCGTGAIGVALLAAVPGAEVHAADIDPAAVRCARRNLPPDRVHEGDLYDA LPGELRGRVAVVVANAPYVPTGAIATMPPEARDHEHRVALDGGADGLEVARRVIAGARPWLAPGGRVLVETSAAQRDLAA AHVVAAGLDVTVASAADVDGNVVIGRLHPERLSPERLSPEQLSPGQLSPGQLSPGRPRC
Specific function: Probable protein methyltransferase. May methylate a Gln residue in target proteins [H]
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hemK family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=211, Percent_Identity=28.9099526066351, Blast_Score=79, Evalue=4e-15, Organism=Escherichia coli, GI87082085, Length=209, Percent_Identity=29.6650717703349, Blast_Score=79, Evalue=4e-16, Organism=Escherichia coli, GI1787463, Length=226, Percent_Identity=30.9734513274336, Blast_Score=79, Evalue=5e-16, Organism=Drosophila melanogaster, GI24582226, Length=210, Percent_Identity=31.4285714285714, Blast_Score=84, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR019874 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: 2.1.1.-
Molecular weight: Translated: 30710; Mature: 30710
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLGMAASSTMAGPAPDDALVATLRAAGCVFAEDEAALLAREAGDEAALAAMVARRVAG CEEECCCCCCCCCCCCCHHHHHHHHHHHCEEEECCHHHHHHHHCCCHHHHHHHHHHHHCC EPLEQVLGFAEFLGLRVAVEPGVFVPRLRTTLLARRAIRALEPGDLAVDLCCGTGAIGVA CHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHH LLAAVPGAEVHAADIDPAAVRCARRNLPPDRVHEGDLYDALPGELRGRVAVVVANAPYVP HHHHCCCCCEEECCCCHHHHHHHHCCCCHHHCCCCCCHHCCCHHHCCCEEEEEECCCCCC TGAIATMPPEARDHEHRVALDGGADGLEVARRVIAGARPWLAPGGRVLVETSAAQRDLAA CCCEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHH AHVVAAGLDVTVASAADVDGNVVIGRLHPERLSPERLSPEQLSPGQLSPGQLSPGRPRC HHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLTLGMAASSTMAGPAPDDALVATLRAAGCVFAEDEAALLAREAGDEAALAAMVARRVAG CEEECCCCCCCCCCCCCHHHHHHHHHHHCEEEECCHHHHHHHHCCCHHHHHHHHHHHHCC EPLEQVLGFAEFLGLRVAVEPGVFVPRLRTTLLARRAIRALEPGDLAVDLCCGTGAIGVA CHHHHHHHHHHHHCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHH LLAAVPGAEVHAADIDPAAVRCARRNLPPDRVHEGDLYDALPGELRGRVAVVVANAPYVP HHHHCCCCCEEECCCCHHHHHHHHCCCCHHHCCCCCCHHCCCHHHCCCEEEEEECCCCCC TGAIATMPPEARDHEHRVALDGGADGLEVARRVIAGARPWLAPGGRVLVETSAAQRDLAA CCCEEECCCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHH AHVVAAGLDVTVASAADVDGNVVIGRLHPERLSPERLSPEQLSPGQLSPGQLSPGRPRC HHHHHHCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11214968 [H]