| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714683
Identifier: 119714683
GI number: 119714683
Start: 450723
End: 451823
Strand: Direct
Name: 119714683
Synonym: Noca_0419
Alternate gene names: NA
Gene position: 450723-451823 (Clockwise)
Preceding gene: 119714682
Following gene: 119714685
Centisome position: 9.04
GC content: 76.84
Gene sequence:
>1101_bases GTGGTCCGACGGGTCCGTCTCGGGCGCCGCGATGCGTCCCGGCGCGCCCGCAGGTGGGCGGGCCCGCCGCCGCTGCTGCT CGTCGCCACGCTGATCGGCTTCCTGGTCGCGCCGCTGGTCGGTCACCAGCCCGAGCCGCCGCCGGCGGCGCGGATCGCGG CCCACGTCACCGCCCCGGGCGCCCGCGACTCGGTGCTCACGGCGTCGCCCACGCACCCGCGGGCGGTCGCCGACCGGCCG CCGCGCCAGCGGGTCCTGAGTGCCGCGCCCTCCCGTGCCGGGCACGCCGCGGGCGCGGGCCTGCGGCCGGTGCGGCTCAA ACGCGTGCACATCGGCGTCGCGAGCATGAACATGTACCGCAAGCTGAGCCCGGCGCAGGCCGCACACGACGCCCGCCGGC TGACCCGCCGGCCCGGCCTGGACGTGGTGGGCTGGCAGGAGGCCGACCGGTTCGGCCGGGTGCTCCACTCGCTGCCGGGC TGGGACACCAAGACCTTCCCGTTCGGCCGCCGCAACTCCGAGATCGCGGTCTCCTGGCGGCGCTCGGAGTTCGCGCTGGT CTCGGCTCGCCAGCGTCAGGTCGCGCAGGGTGTGAGCTGGCGGGACGGCCGCTACCCGTTCGGCAACCGGATGGTCGGCG TGGTCACCCTCCGGCACCGCGACACCGGCCGGCTGCTGACCGTGGTCGACGCGCACCTGCCGCAGGCCATCGAGGACCTG TCGCGCCCCGGGCGGTGGACGCCGACGATCAACGCCTACCGGGCCCGCAACCAGCTGGCCCGGATCGCGACGACCTGGCG CTCCGCCCCCGGCCGGTGGGTGGTCGGGACCGGCGACTACAACTTCGACGCGCGCGCCGACGCGCGGCACCGGCCCCGGG GCGGCCCGCGCCGGGCCCTGGCCGACACCGCGGTGTCGTCGTACCAGGCGCTGGGCGCCGACGTGGCGCCGACGTTCCCC TCGAACGGGCGCCGGATCGACTACGTGTACGTCGACCGCGCGGCCTACCGGGCCGAGCAGATGCGGTTCACGGGCCAGTG GGTGGTCGGCGGCTTCGCGAGCGACCACAACGCGCTGGTGACCCGGCTCGTGCTCAGCTGA
Upstream 100 bases:
>100_bases GTCGCGGCGACACGGGCGTGACCTCCGAGGCTGAAGTGGCTCACGGGGCTAGCGTGAGGGCCAGCCGCACAACCGCCAGA CCGAGTCGAGGGGAAGCCGC
Downstream 100 bases:
>100_bases CCGCCACCCGGGGGCCGACCCGGGCCTGGGCCCAGCGCACCAGCGGCGCCAGGTGCGCAGCGGCGGCGCGCCCGTCGTCG GTGAGGGAGTACTCCACGTG
Product: endonuclease/exonuclease/phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MVRRVRLGRRDASRRARRWAGPPPLLLVATLIGFLVAPLVGHQPEPPPAARIAAHVTAPGARDSVLTASPTHPRAVADRP PRQRVLSAAPSRAGHAAGAGLRPVRLKRVHIGVASMNMYRKLSPAQAAHDARRLTRRPGLDVVGWQEADRFGRVLHSLPG WDTKTFPFGRRNSEIAVSWRRSEFALVSARQRQVAQGVSWRDGRYPFGNRMVGVVTLRHRDTGRLLTVVDAHLPQAIEDL SRPGRWTPTINAYRARNQLARIATTWRSAPGRWVVGTGDYNFDARADARHRPRGGPRRALADTAVSSYQALGADVAPTFP SNGRRIDYVYVDRAAYRAEQMRFTGQWVVGGFASDHNALVTRLVLS
Sequences:
>Translated_366_residues MVRRVRLGRRDASRRARRWAGPPPLLLVATLIGFLVAPLVGHQPEPPPAARIAAHVTAPGARDSVLTASPTHPRAVADRP PRQRVLSAAPSRAGHAAGAGLRPVRLKRVHIGVASMNMYRKLSPAQAAHDARRLTRRPGLDVVGWQEADRFGRVLHSLPG WDTKTFPFGRRNSEIAVSWRRSEFALVSARQRQVAQGVSWRDGRYPFGNRMVGVVTLRHRDTGRLLTVVDAHLPQAIEDL SRPGRWTPTINAYRARNQLARIATTWRSAPGRWVVGTGDYNFDARADARHRPRGGPRRALADTAVSSYQALGADVAPTFP SNGRRIDYVYVDRAAYRAEQMRFTGQWVVGGFASDHNALVTRLVLS >Mature_366_residues MVRRVRLGRRDASRRARRWAGPPPLLLVATLIGFLVAPLVGHQPEPPPAARIAAHVTAPGARDSVLTASPTHPRAVADRP PRQRVLSAAPSRAGHAAGAGLRPVRLKRVHIGVASMNMYRKLSPAQAAHDARRLTRRPGLDVVGWQEADRFGRVLHSLPG WDTKTFPFGRRNSEIAVSWRRSEFALVSARQRQVAQGVSWRDGRYPFGNRMVGVVTLRHRDTGRLLTVVDAHLPQAIEDL SRPGRWTPTINAYRARNQLARIATTWRSAPGRWVVGTGDYNFDARADARHRPRGGPRRALADTAVSSYQALGADVAPTFP SNGRRIDYVYVDRAAYRAEQMRFTGQWVVGGFASDHNALVTRLVLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40498; Mature: 40498
Theoretical pI: Translated: 12.33; Mature: 12.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRRVRLGRRDASRRARRWAGPPPLLLVATLIGFLVAPLVGHQPEPPPAARIAAHVTAPG CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEECCC ARDSVLTASPTHPRAVADRPPRQRVLSAAPSRAGHAAGAGLRPVRLKRVHIGVASMNMYR CCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHH KLSPAQAAHDARRLTRRPGLDVVGWQEADRFGRVLHSLPGWDTKTFPFGRRNSEIAVSWR HCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE RSEFALVSARQRQVAQGVSWRDGRYPFGNRMVGVVTLRHRDTGRLLTVVDAHLPQAIEDL CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEHHHHHHHHHHHH SRPGRWTPTINAYRARNQLARIATTWRSAPGRWVVGTGDYNFDARADARHRPRGGPRRAL CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHH ADTAVSSYQALGADVAPTFPSNGRRIDYVYVDRAAYRAEQMRFTGQWVVGGFASDHNALV HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHHHEECCCEEEEECCCCHHHHH TRLVLS HHHHCC >Mature Secondary Structure MVRRVRLGRRDASRRARRWAGPPPLLLVATLIGFLVAPLVGHQPEPPPAARIAAHVTAPG CCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEECCC ARDSVLTASPTHPRAVADRPPRQRVLSAAPSRAGHAAGAGLRPVRLKRVHIGVASMNMYR CCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEHHHHHHHH KLSPAQAAHDARRLTRRPGLDVVGWQEADRFGRVLHSLPGWDTKTFPFGRRNSEIAVSWR HCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE RSEFALVSARQRQVAQGVSWRDGRYPFGNRMVGVVTLRHRDTGRLLTVVDAHLPQAIEDL CCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEHHHHHHHHHHHH SRPGRWTPTINAYRARNQLARIATTWRSAPGRWVVGTGDYNFDARADARHRPRGGPRRAL CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHH ADTAVSSYQALGADVAPTFPSNGRRIDYVYVDRAAYRAEQMRFTGQWVVGGFASDHNALV HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHHHEECCCEEEEECCCCHHHHH TRLVLS HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA