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The map label for this gene is 119714673

Identifier: 119714673

GI number: 119714673

Start: 439817

End: 442225

Strand: Reverse

Name: 119714673

Synonym: Noca_0408

Alternate gene names: NA

Gene position: 442225-439817 (Counterclockwise)

Preceding gene: 119714674

Following gene: 119714667

Centisome position: 8.87

GC content: 72.64

Gene sequence:

>2409_bases
ATGGATCGCAAGAGCTCCCTCGTCCTTCTCCTGCTGCTCGCCCTCGCCCTGGTGGGGATGGGCGCGCCGGCGGCCAGCAG
CCCGTCGAGCGAGTTCGTCCGTCCGAGCTGGGGTGACGGTCAGCTGCCCGCAGGCTGCGTGGTCGACCGCGACCCGCTCA
ACCCCGACAACCTCTGCTACCACATGAAGGTGGGCCTGAACGCCCTCGACTCCCCGAAGGTCGATGTCGACGTGCTGGTG
CCGGTCTCCCCCGCGGCCGAGCGTGACATGCGGGTCGCCGAGCAGGCCGTGATGATGTGGGAAGGCGGCCTGCACCATCT
CGCCGACCAGATGGACCTGCCCTGGCTGAAGGACGGGTTCGACATGAACGTCCGCACCCACCAGGTCGTGGTCGACCCCA
CCGGAGCGCTGCAGCAGCCCCTCGCCCTGGTCGATCCCGAGATCGTCGTGATCGTCAGCAACCCGGCCGGCGGGGTCGGC
ATCGGGATCGACCCGGTGTCGTTCGCCGGCGAGCTCGGGATCATTGACGGCGAGGGCGCTCCGTGCGCCGCCGTGCCCTC
CCCGCTGGACTTCGGCACGTGGACGGACAAGCCGGGGTTCGAGCAGCACGGCCGCGAGAAGGGCGGTGTGTACGTCGAGG
ACTGCGGCGGCGTCGGCGGCAACGTCTGCTTCGCCGTCAACGGCGCGGTGGACCCGGTGCCCGGCGCGTCCGACTTCTTC
GGCCTCTTCGACCTGGTGGCCCACGAGTTCGGCCACTGCCTCACCCTGGGCCACGTGGGCGACGGCGCCGACGGCCCCTG
GGGCCCGACGCCGACCAACGACATCATGGCCTACAGCACCGACCCGCCGGGCGTCGCCAAGTGCGTCTCCACCCTCGACG
TCGAGGGCTTCGCGCTGCGGATGAGCCGGTACCTCGACGTCAACGGAGACGGGGCGGTGGACCGGCACGACCACCTCGCC
CCCAACGACGTCCGGGGCGACGGGTTCAACTCGTTCCAGGTGCAGCACCCCGACGACCACCTCTACGCCTCCTCGACCGG
GGACCCTGCGGACTGCCCGCAGCCCGAGCTCGGTCCCGTCCCGCTCAGCTACGGCAGCTGGAGCCCGAAGCCCGTCGCCA
CGACACGTCCGGTGCTGCGGACCTCCTCCCTGCAGGTCACCAACGGCCACGTGCACGTGCGCGGTGACGCCACCAACGAG
CCCCTCGGCAAGACGCCGACCCAGCGCAGCGCGCGGGCGACCGACGCCACGTCCGACTCGCCCACCCCGGTCACGGACCT
GACCGGCGTCCAGGTGTCGGTGACGCGCAGGACGGTGGACGCGACGATGTCGGTCACCCAGGTGTGGCCGGTCGCTCAGG
GCGGGTCGGCCACGGCGTACAGCCTGCTCGTCTCGGGGCGCCGCTTCGACTCCTTCATCTGCACCGGGGACACGTCCGGC
ACCCCGCAGGTGATGGACAACGGCACCGGCTACTACCTGCCCGGGGGCAGCGCGACCTGGAACTACGACGACAACACCGT
CACCTTCCACATCCGCCGCGACTACCTGGCCGACCAGCAGATCGAGGCGCCGTACACGGTCAACGCCATCACCGGCCTGC
ACGCGCGCGGCAACGACTGGATCGCGACCACGGACGCCGCTCCGGACGGCGCCGGGCTGCGCCTGGCCGCGCCGCCGATG
GGCGCCGAGACCCGCGACGCGCCGGTCGCCCGGACGGTGCGGACCGCACGGGTCGAGCTGACCCCGGAGGGCGGCGCCAG
CGTCCTGCCCACCGACAGCACGCTCGGCGTCGGCCTGGTCAGCGCCGTCGACAGCCGCGACTACTTCGACCTGCCGATCG
CGAAACAGGCGACCGCCGAGGTCACCCTGAGCTGGACCGGCTCCACGATCTTCGGCCTCTCCGTCAACGGCGGCTCGGGG
CAGCAGGTGGCGGAGCAGGACGGCCGCATCACCGTCACCGTCCCGTGGGCCCGCCGGGACCTGTCGATCACCGTCGACCC
GCAGGAGGTCGTCGAGCCGACGACCTACACGCTGACCGCCCGACTGACCACGGTGCGGGCCGACCACGACCGCGACCGGG
TGCCGGACGTCGCCGACCGGTGCCCGACCCGGCCCGGGCCCAGCGCCAGCAGCGGCTGCCCCGACACCGACGCCGACGGC
ATCCTCGACCGGGACGACCGGTGCCCGACCGAGGCCTCGGCGAGCGCGTCCGGGTGCCCGACGGACGGCGACGAACGGGT
CGTCCTGATCGTCGACGGGAGGCGGCTGGCCGCACAGACGGTGGTCACCGCCCACGGCAGCGCGGCCTTCACCCTCGACG
GCGTGGTCGGCCGAGGCACGCACCGCGTGGTGCTCGCCTGGATCCGTGACGGCAAGGTCGTCGCGCGGATCAGCCGGCGG
GCCGGGTAG

Upstream 100 bases:

>100_bases
TGACGCCGCTGCTCGAGCAGGGCTGGCCGTAGCCGAGGCACCGGTCCGCCGGCAGTCCAGCCAAGCCCTAGCCTCACCCC
GATTGCGTCGTTTCCCGGGC

Downstream 100 bases:

>100_bases
CCGCGGGCCCGTGCTGCCCGTCCGGGACCGACCAGCAGCCGGCGGCCGACGGGCATCCTGCCGTGGTGTCGCTCTGGGTC
ACCGCGTGCAGTGCTCGGCC

Product: thrombospondin type 3 repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 802; Mature: 802

Protein sequence:

>802_residues
MDRKSSLVLLLLLALALVGMGAPAASSPSSEFVRPSWGDGQLPAGCVVDRDPLNPDNLCYHMKVGLNALDSPKVDVDVLV
PVSPAAERDMRVAEQAVMMWEGGLHHLADQMDLPWLKDGFDMNVRTHQVVVDPTGALQQPLALVDPEIVVIVSNPAGGVG
IGIDPVSFAGELGIIDGEGAPCAAVPSPLDFGTWTDKPGFEQHGREKGGVYVEDCGGVGGNVCFAVNGAVDPVPGASDFF
GLFDLVAHEFGHCLTLGHVGDGADGPWGPTPTNDIMAYSTDPPGVAKCVSTLDVEGFALRMSRYLDVNGDGAVDRHDHLA
PNDVRGDGFNSFQVQHPDDHLYASSTGDPADCPQPELGPVPLSYGSWSPKPVATTRPVLRTSSLQVTNGHVHVRGDATNE
PLGKTPTQRSARATDATSDSPTPVTDLTGVQVSVTRRTVDATMSVTQVWPVAQGGSATAYSLLVSGRRFDSFICTGDTSG
TPQVMDNGTGYYLPGGSATWNYDDNTVTFHIRRDYLADQQIEAPYTVNAITGLHARGNDWIATTDAAPDGAGLRLAAPPM
GAETRDAPVARTVRTARVELTPEGGASVLPTDSTLGVGLVSAVDSRDYFDLPIAKQATAEVTLSWTGSTIFGLSVNGGSG
QQVAEQDGRITVTVPWARRDLSITVDPQEVVEPTTYTLTARLTTVRADHDRDRVPDVADRCPTRPGPSASSGCPDTDADG
ILDRDDRCPTEASASASGCPTDGDERVVLIVDGRRLAAQTVVTAHGSAAFTLDGVVGRGTHRVVLAWIRDGKVVARISRR
AG

Sequences:

>Translated_802_residues
MDRKSSLVLLLLLALALVGMGAPAASSPSSEFVRPSWGDGQLPAGCVVDRDPLNPDNLCYHMKVGLNALDSPKVDVDVLV
PVSPAAERDMRVAEQAVMMWEGGLHHLADQMDLPWLKDGFDMNVRTHQVVVDPTGALQQPLALVDPEIVVIVSNPAGGVG
IGIDPVSFAGELGIIDGEGAPCAAVPSPLDFGTWTDKPGFEQHGREKGGVYVEDCGGVGGNVCFAVNGAVDPVPGASDFF
GLFDLVAHEFGHCLTLGHVGDGADGPWGPTPTNDIMAYSTDPPGVAKCVSTLDVEGFALRMSRYLDVNGDGAVDRHDHLA
PNDVRGDGFNSFQVQHPDDHLYASSTGDPADCPQPELGPVPLSYGSWSPKPVATTRPVLRTSSLQVTNGHVHVRGDATNE
PLGKTPTQRSARATDATSDSPTPVTDLTGVQVSVTRRTVDATMSVTQVWPVAQGGSATAYSLLVSGRRFDSFICTGDTSG
TPQVMDNGTGYYLPGGSATWNYDDNTVTFHIRRDYLADQQIEAPYTVNAITGLHARGNDWIATTDAAPDGAGLRLAAPPM
GAETRDAPVARTVRTARVELTPEGGASVLPTDSTLGVGLVSAVDSRDYFDLPIAKQATAEVTLSWTGSTIFGLSVNGGSG
QQVAEQDGRITVTVPWARRDLSITVDPQEVVEPTTYTLTARLTTVRADHDRDRVPDVADRCPTRPGPSASSGCPDTDADG
ILDRDDRCPTEASASASGCPTDGDERVVLIVDGRRLAAQTVVTAHGSAAFTLDGVVGRGTHRVVLAWIRDGKVVARISRR
AG
>Mature_802_residues
MDRKSSLVLLLLLALALVGMGAPAASSPSSEFVRPSWGDGQLPAGCVVDRDPLNPDNLCYHMKVGLNALDSPKVDVDVLV
PVSPAAERDMRVAEQAVMMWEGGLHHLADQMDLPWLKDGFDMNVRTHQVVVDPTGALQQPLALVDPEIVVIVSNPAGGVG
IGIDPVSFAGELGIIDGEGAPCAAVPSPLDFGTWTDKPGFEQHGREKGGVYVEDCGGVGGNVCFAVNGAVDPVPGASDFF
GLFDLVAHEFGHCLTLGHVGDGADGPWGPTPTNDIMAYSTDPPGVAKCVSTLDVEGFALRMSRYLDVNGDGAVDRHDHLA
PNDVRGDGFNSFQVQHPDDHLYASSTGDPADCPQPELGPVPLSYGSWSPKPVATTRPVLRTSSLQVTNGHVHVRGDATNE
PLGKTPTQRSARATDATSDSPTPVTDLTGVQVSVTRRTVDATMSVTQVWPVAQGGSATAYSLLVSGRRFDSFICTGDTSG
TPQVMDNGTGYYLPGGSATWNYDDNTVTFHIRRDYLADQQIEAPYTVNAITGLHARGNDWIATTDAAPDGAGLRLAAPPM
GAETRDAPVARTVRTARVELTPEGGASVLPTDSTLGVGLVSAVDSRDYFDLPIAKQATAEVTLSWTGSTIFGLSVNGGSG
QQVAEQDGRITVTVPWARRDLSITVDPQEVVEPTTYTLTARLTTVRADHDRDRVPDVADRCPTRPGPSASSGCPDTDADG
ILDRDDRCPTEASASASGCPTDGDERVVLIVDGRRLAAQTVVTAHGSAAFTLDGVVGRGTHRVVLAWIRDGKVVARISRR
AG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 84348; Mature: 84348

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRKSSLVLLLLLALALVGMGAPAASSPSSEFVRPSWGDGQLPAGCVVDRDPLNPDNLCY
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEE
HMKVGLNALDSPKVDVDVLVPVSPAAERDMRVAEQAVMMWEGGLHHLADQMDLPWLKDGF
EEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCC
DMNVRTHQVVVDPTGALQQPLALVDPEIVVIVSNPAGGVGIGIDPVSFAGELGIIDGEGA
CCCEEEEEEEECCCCHHHCCHHHCCCCEEEEECCCCCCEEECCCCHHCCCCEEEEECCCC
PCAAVPSPLDFGTWTDKPGFEQHGREKGGVYVEDCGGVGGNVCFAVNGAVDPVPGASDFF
CCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCHHHH
GLFDLVAHEFGHCLTLGHVGDGADGPWGPTPTNDIMAYSTDPPGVAKCVSTLDVEGFALR
HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCEEEE
MSRYLDVNGDGAVDRHDHLAPNDVRGDGFNSFQVQHPDDHLYASSTGDPADCPQPELGPV
EEHEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCE
PLSYGSWSPKPVATTRPVLRTSSLQVTNGHVHVRGDATNEPLGKTPTQRSARATDATSDS
EECCCCCCCCCCCCCCCCEEECEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PTPVTDLTGVQVSVTRRTVDATMSVTQVWPVAQGGSATAYSLLVSGRRFDSFICTGDTSG
CCCCCCCCCCEEEEEEEEECCEEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCC
TPQVMDNGTGYYLPGGSATWNYDDNTVTFHIRRDYLADQQIEAPYTVNAITGLHARGNDW
CCCEEECCCEEEECCCCEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCE
IATTDAAPDGAGLRLAAPPMGAETRDAPVARTVRTARVELTPEGGASVLPTDSTLGVGLV
EEECCCCCCCCCEEEECCCCCCCCCCCCHHHEEEEEEEEECCCCCCEECCCCCCCCCHHE
SAVDSRDYFDLPIAKQATAEVTLSWTGSTIFGLSVNGGSGQQVAEQDGRITVTVPWARRD
EHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCHHHHCCCEEEEEECCCCCC
LSITVDPQEVVEPTTYTLTARLTTVRADHDRDRVPDVADRCPTRPGPSASSGCPDTDADG
EEEEECHHHHHCCCEEEEEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC
ILDRDDRCPTEASASASGCPTDGDERVVLIVDGRRLAAQTVVTAHGSAAFTLDGVVGRGT
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCEEEEECCEECCCC
HRVVLAWIRDGKVVARISRRAG
CEEEEEEECCCEEEEEHHHHCC
>Mature Secondary Structure
MDRKSSLVLLLLLALALVGMGAPAASSPSSEFVRPSWGDGQLPAGCVVDRDPLNPDNLCY
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEE
HMKVGLNALDSPKVDVDVLVPVSPAAERDMRVAEQAVMMWEGGLHHLADQMDLPWLKDGF
EEEECCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCC
DMNVRTHQVVVDPTGALQQPLALVDPEIVVIVSNPAGGVGIGIDPVSFAGELGIIDGEGA
CCCEEEEEEEECCCCHHHCCHHHCCCCEEEEECCCCCCEEECCCCHHCCCCEEEEECCCC
PCAAVPSPLDFGTWTDKPGFEQHGREKGGVYVEDCGGVGGNVCFAVNGAVDPVPGASDFF
CCCCCCCCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCHHHH
GLFDLVAHEFGHCLTLGHVGDGADGPWGPTPTNDIMAYSTDPPGVAKCVSTLDVEGFALR
HHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCEEEE
MSRYLDVNGDGAVDRHDHLAPNDVRGDGFNSFQVQHPDDHLYASSTGDPADCPQPELGPV
EEHEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEECCCCCCCCCCCCCCCCE
PLSYGSWSPKPVATTRPVLRTSSLQVTNGHVHVRGDATNEPLGKTPTQRSARATDATSDS
EECCCCCCCCCCCCCCCCEEECEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PTPVTDLTGVQVSVTRRTVDATMSVTQVWPVAQGGSATAYSLLVSGRRFDSFICTGDTSG
CCCCCCCCCCEEEEEEEEECCEEEEEEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCC
TPQVMDNGTGYYLPGGSATWNYDDNTVTFHIRRDYLADQQIEAPYTVNAITGLHARGNDW
CCCEEECCCEEEECCCCEEEECCCCEEEEEEECCCCCCCCCCCCEEEEEEEEEEECCCCE
IATTDAAPDGAGLRLAAPPMGAETRDAPVARTVRTARVELTPEGGASVLPTDSTLGVGLV
EEECCCCCCCCCEEEECCCCCCCCCCCCHHHEEEEEEEEECCCCCCEECCCCCCCCCHHE
SAVDSRDYFDLPIAKQATAEVTLSWTGSTIFGLSVNGGSGQQVAEQDGRITVTVPWARRD
EHHCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCCCCCHHHHCCCEEEEEECCCCCC
LSITVDPQEVVEPTTYTLTARLTTVRADHDRDRVPDVADRCPTRPGPSASSGCPDTDADG
EEEEECHHHHHCCCEEEEEEEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC
ILDRDDRCPTEASASASGCPTDGDERVVLIVDGRRLAAQTVVTAHGSAAFTLDGVVGRGT
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEEEECCCEEEEECCEECCCC
HRVVLAWIRDGKVVARISRRAG
CEEEEEEECCCEEEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA