Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119714662

Identifier: 119714662

GI number: 119714662

Start: 427653

End: 428579

Strand: Direct

Name: 119714662

Synonym: Noca_0397

Alternate gene names: NA

Gene position: 427653-428579 (Clockwise)

Preceding gene: 119714661

Following gene: 119714668

Centisome position: 8.58

GC content: 68.39

Gene sequence:

>927_bases
ATGCGCAAGATCCTGCCCGCTCTGCTCATCGTGGTGGGCACCTTCTTCCTGGTGGTGGCGATCGTCGCCCTCACCTGGGT
GCCCGGACAGGTCGAGCGGACGCCGCTCGACACCGACAACGTCACCGACCTGTCCGGCACGGCCGGCGTGTTCTCCGGCG
GAGACGCCCTCGACGAGGGGCCGGTCAAGGCGTGGAGCACCAATGCCGTCGACTCCGAGGCGTCCGACGACGACAACGTG
GTGTTCAACACCTCGCTGTGCCTGGTGCACGACGAGGGCGGCATCGACGGCTGCGTCGACGCGGACGACCCCCAGGGCCG
GCTGATCAGCGCCGAAACGACCCTGTTCGTCACCGATCGGCACACCGCGATGACGGTGGACAACGACGGGTACCTGCCCG
AGACCGCCCCGCAGCTCGAGGGCCTGCAGAACAAGTGGCCGTTCGACGCCCAGAAGAAGGCCTACCCGGTCTGGGACGAC
ATCATCGCCGGCACCGTCGAGGCGGAGTACCTGGGCGAGGACGAGATCGACGGCCTGAAGGTCTACAAGTACGAGTACCA
CGCCACCGCCGATTCGGTCGTGGTGGCCGGCGACATCACCGGCACGTACGACGCGACGTACACGTTCTACATCGAGCCGC
GGACCGGTTCGATCATCAAGCAGGTCGTCCACCAGGAGCGGGTCGCCGACAACGGGACGCCGCTGCTGGAGCTCGACCTG
GCATTCACCGACGAGCAGGTCCAGAAGAACGTCGACGACGCCAACGAAGCGATCTCGACGCTGCGCCTGCTCGAGGACAT
CGTCCCGATCGTCGGACTCGCCGCCGGGATCCCCCTCATCCTGCTCGGGCTGGCGCTGCTGCTCCTCGCCCGCCGCCGGC
GCACGGCGGCTCCCGCGGACCAGCCGAAGGCCACGGCCGGGGCCTGA

Upstream 100 bases:

>100_bases
GGTTGCAGGGCGGGCGGACACTGTAACGTTCGCCTTGTAGATGGCTCGGTCCCTGGCGACAGTCGGCGCCCGGCTCGACG
TGCCACGCCGAGGAGGCGTC

Downstream 100 bases:

>100_bases
CCTCGCCGGTCGCCTGCCGTCGGCGGACGGGCGGCGCGGACTACGTGCGCGGAACCTCAGCGTCCAGTGTTGAAGATCGT
GTTCAGTCGGGCGACCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MRKILPALLIVVGTFFLVVAIVALTWVPGQVERTPLDTDNVTDLSGTAGVFSGGDALDEGPVKAWSTNAVDSEASDDDNV
VFNTSLCLVHDEGGIDGCVDADDPQGRLISAETTLFVTDRHTAMTVDNDGYLPETAPQLEGLQNKWPFDAQKKAYPVWDD
IIAGTVEAEYLGEDEIDGLKVYKYEYHATADSVVVAGDITGTYDATYTFYIEPRTGSIIKQVVHQERVADNGTPLLELDL
AFTDEQVQKNVDDANEAISTLRLLEDIVPIVGLAAGIPLILLGLALLLLARRRRTAAPADQPKATAGA

Sequences:

>Translated_308_residues
MRKILPALLIVVGTFFLVVAIVALTWVPGQVERTPLDTDNVTDLSGTAGVFSGGDALDEGPVKAWSTNAVDSEASDDDNV
VFNTSLCLVHDEGGIDGCVDADDPQGRLISAETTLFVTDRHTAMTVDNDGYLPETAPQLEGLQNKWPFDAQKKAYPVWDD
IIAGTVEAEYLGEDEIDGLKVYKYEYHATADSVVVAGDITGTYDATYTFYIEPRTGSIIKQVVHQERVADNGTPLLELDL
AFTDEQVQKNVDDANEAISTLRLLEDIVPIVGLAAGIPLILLGLALLLLARRRRTAAPADQPKATAGA
>Mature_308_residues
MRKILPALLIVVGTFFLVVAIVALTWVPGQVERTPLDTDNVTDLSGTAGVFSGGDALDEGPVKAWSTNAVDSEASDDDNV
VFNTSLCLVHDEGGIDGCVDADDPQGRLISAETTLFVTDRHTAMTVDNDGYLPETAPQLEGLQNKWPFDAQKKAYPVWDD
IIAGTVEAEYLGEDEIDGLKVYKYEYHATADSVVVAGDITGTYDATYTFYIEPRTGSIIKQVVHQERVADNGTPLLELDL
AFTDEQVQKNVDDANEAISTLRLLEDIVPIVGLAAGIPLILLGLALLLLARRRRTAAPADQPKATAGA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33115; Mature: 33115

Theoretical pI: Translated: 3.98; Mature: 3.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKILPALLIVVGTFFLVVAIVALTWVPGQVERTPLDTDNVTDLSGTAGVFSGGDALDEG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PVKAWSTNAVDSEASDDDNVVFNTSLCLVHDEGGIDGCVDADDPQGRLISAETTLFVTDR
CCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECEEEEEECC
HTAMTVDNDGYLPETAPQLEGLQNKWPFDAQKKAYPVWDDIIAGTVEAEYLGEDEIDGLK
CEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHCCCCCCCCEE
VYKYEYHATADSVVVAGDITGTYDATYTFYIEPRTGSIIKQVVHQERVADNGTPLLELDL
EEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEE
AFTDEQVQKNVDDANEAISTLRLLEDIVPIVGLAAGIPLILLGLALLLLARRRRTAAPAD
EECHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QPKATAGA
CCCCCCCC
>Mature Secondary Structure
MRKILPALLIVVGTFFLVVAIVALTWVPGQVERTPLDTDNVTDLSGTAGVFSGGDALDEG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PVKAWSTNAVDSEASDDDNVVFNTSLCLVHDEGGIDGCVDADDPQGRLISAETTLFVTDR
CCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEEEECEEEEEECC
HTAMTVDNDGYLPETAPQLEGLQNKWPFDAQKKAYPVWDDIIAGTVEAEYLGEDEIDGLK
CEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHCCCCCCCCEE
VYKYEYHATADSVVVAGDITGTYDATYTFYIEPRTGSIIKQVVHQERVADNGTPLLELDL
EEEEEEECCCCCEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCCCEEEEEE
AFTDEQVQKNVDDANEAISTLRLLEDIVPIVGLAAGIPLILLGLALLLLARRRRTAAPAD
EECHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
QPKATAGA
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA