| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is mtnAB [H]
Identifier: 119714668
GI number: 119714668
Start: 433600
End: 434634
Strand: Direct
Name: mtnAB [H]
Synonym: Noca_0403
Alternate gene names: 119714668
Gene position: 433600-434634 (Clockwise)
Preceding gene: 119714662
Following gene: 119714669
Centisome position: 8.7
GC content: 71.79
Gene sequence:
>1035_bases ATGGTCCTGGCATTGCAATGGCAGGAGGACGCGCAGACGATCCGGCTGCTCGACCAGACCCTTCTGCCCGTCGAGGAGCG CTACCTGGACGTCGACACCGTCGACGCCCTGGTCGCCGCGATCCAGAGCCTGGCGGTCCGGGGAGCGCCTGCGCTCGGGG CCGTGGGTGCGCTCGGTGTGGTCGTCGCCATGCGGCAGGCCGAGCGCGAGGGCTGGGATGACGAGCGGCTGCAGGTCGAG GTCGACCGGATCCGACTGGCACGTCCGACGGCCGTGAACCTCGCCTGGGGCGTGGACCAGGTCCGCGCCGCGATGCCGTC GGGGCCGGAGACGGTGCTGAAGATGGCCAAGGCCGTCGTGGAGGAGGACGAGGCGGCCAACCGGACCCTCTCCCGGCTCG GTGCCGACTGGATCCTGGGTCGCACCGGCAGGGAACGCGTGCGCGTCGTCACGCACTGCAACACCGGCGCGCTGGCCACC TCGGCCTGGGGGACCGCCTACGGGATCATCCACGAGCTCCACGACCGTGGCGCCTTGGAGGTCGTGTACGTCGACGAGAC CCGCCCGCTGCTCCAAGGTGCCCGGCTGACCAGCTGGGAGCTGACGCGGGACGAGATCCCGCATCTGCTCGAGGTGGACG GCGCGGCGTCGAGCACGATCGTGCGCGGCCTCGTGGACGTCGCGATCATCGGCGCGGACCGGATCACCGCCAACGGCGAC ACTGCGAACAAGGTCGGCTCGCTGGCCCTGGCCCTGGCCTGCCAACGAGCCGGGATCCCGTTCGTGGTCGCGGCGCCGAG CTCCACTGTCGACCTGGCGACGGCCCATGGCGACGACATCGCGATCGAGGAGCGGGACGCCGCGGAGGTGCTCAGTCTCG GGGGCCACCCGACGGCGTTGCCGTCGACCCGGGTCTACAACCCCGCCTTCGACGTGACTCCGCACGACCTGATCAGCGCG ATCGTGACGGACCGGGGGGTGGTCGAGCCGGCCGCCCGTCCCGCCCCGAACCTGCTCGCATCGGTGGCGAGCTGA
Upstream 100 bases:
>100_bases CGGCCGTGTGTTCACTCGAATCCGTTGACAACTGCCTAAGTCATATCTACTCTCCCAAGCAGTTGTAAAACAACCGGCAG TATATCGGGAGGCGAACCAC
Downstream 100 bases:
>100_bases CACATGAGGCAGACCGGAGCCCCGGCTGCACCTACGAGAGGAACCCCATGAGGATGAACAAACTCATCGTGGCCGGTGTC GCCGCGGTGTCTGCCTTGAG
Product: translation initiation factor 2B subunit I
Products: NA
Alternate protein names: Methylthioribose-1-phosphate isomerase; M1Pi; MTR-1-P isomerase; S-methyl-5-thioribose-1-phosphate isomerase; Methylthioribulose-1-phosphate dehydratase; MTRu-1-P dehydratase [H]
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MVLALQWQEDAQTIRLLDQTLLPVEERYLDVDTVDALVAAIQSLAVRGAPALGAVGALGVVVAMRQAEREGWDDERLQVE VDRIRLARPTAVNLAWGVDQVRAAMPSGPETVLKMAKAVVEEDEAANRTLSRLGADWILGRTGRERVRVVTHCNTGALAT SAWGTAYGIIHELHDRGALEVVYVDETRPLLQGARLTSWELTRDEIPHLLEVDGAASSTIVRGLVDVAIIGADRITANGD TANKVGSLALALACQRAGIPFVVAAPSSTVDLATAHGDDIAIEERDAAEVLSLGGHPTALPSTRVYNPAFDVTPHDLISA IVTDRGVVEPAARPAPNLLASVAS
Sequences:
>Translated_344_residues MVLALQWQEDAQTIRLLDQTLLPVEERYLDVDTVDALVAAIQSLAVRGAPALGAVGALGVVVAMRQAEREGWDDERLQVE VDRIRLARPTAVNLAWGVDQVRAAMPSGPETVLKMAKAVVEEDEAANRTLSRLGADWILGRTGRERVRVVTHCNTGALAT SAWGTAYGIIHELHDRGALEVVYVDETRPLLQGARLTSWELTRDEIPHLLEVDGAASSTIVRGLVDVAIIGADRITANGD TANKVGSLALALACQRAGIPFVVAAPSSTVDLATAHGDDIAIEERDAAEVLSLGGHPTALPSTRVYNPAFDVTPHDLISA IVTDRGVVEPAARPAPNLLASVAS >Mature_344_residues MVLALQWQEDAQTIRLLDQTLLPVEERYLDVDTVDALVAAIQSLAVRGAPALGAVGALGVVVAMRQAEREGWDDERLQVE VDRIRLARPTAVNLAWGVDQVRAAMPSGPETVLKMAKAVVEEDEAANRTLSRLGADWILGRTGRERVRVVTHCNTGALAT SAWGTAYGIIHELHDRGALEVVYVDETRPLLQGARLTSWELTRDEIPHLLEVDGAASSTIVRGLVDVAIIGADRITANGD TANKVGSLALALACQRAGIPFVVAAPSSTVDLATAHGDDIAIEERDAAEVLSLGGHPTALPSTRVYNPAFDVTPHDLISA IVTDRGVVEPAARPAPNLLASVAS
Specific function: Bifunctional protein that catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose- 1-phosphate (MTRu-1-P), and the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5- methylthiopentyl-1-phosp
COG id: COG0182
COG function: function code J; Predicted translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the aldolase class II family. MtnB subfamily [H]
Homologues:
Organism=Homo sapiens, GI72534748, Length=335, Percent_Identity=41.7910447761194, Blast_Score=231, Evalue=7e-61, Organism=Homo sapiens, GI23943880, Length=322, Percent_Identity=37.888198757764, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17557462, Length=325, Percent_Identity=38.7692307692308, Blast_Score=216, Evalue=2e-56, Organism=Saccharomyces cerevisiae, GI6325375, Length=381, Percent_Identity=34.1207349081365, Blast_Score=204, Evalue=2e-53, Organism=Drosophila melanogaster, GI21357667, Length=343, Percent_Identity=38.7755102040816, Blast_Score=228, Evalue=4e-60, Organism=Drosophila melanogaster, GI24651647, Length=343, Percent_Identity=38.7755102040816, Blast_Score=228, Evalue=4e-60,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001303 - InterPro: IPR000649 - InterPro: IPR005251 - InterPro: IPR011559 - InterPro: IPR017714 [H]
Pfam domain/function: PF00596 Aldolase_II; PF01008 IF-2B [H]
EC number: =5.3.1.23; =4.2.1.109 [H]
Molecular weight: Translated: 36529; Mature: 36529
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLALQWQEDAQTIRLLDQTLLPVEERYLDVDTVDALVAAIQSLAVRGAPALGAVGALGV CEEEEEECHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VVAMRQAEREGWDDERLQVEVDRIRLARPTAVNLAWGVDQVRAAMPSGPETVLKMAKAVV HHHHHHHHHCCCCCCCEEEEEEHEEECCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHH EEDEAANRTLSRLGADWILGRTGRERVRVVTHCNTGALATSAWGTAYGIIHELHDRGALE HCHHHHHHHHHHHCCHHEECCCCCCEEEEEEECCCCCEECCCCHHHHHHHHHHCCCCCEE VVYVDETRPLLQGARLTSWELTRDEIPHLLEVDGAASSTIVRGLVDVAIIGADRITANGD EEEECCCCHHHHCCCCCEEECCHHHCCCEEEECCCCHHHHHHHHHHHEEECCCEEECCCC TANKVGSLALALACQRAGIPFVVAAPSSTVDLATAHGDDIAIEERDAAEVLSLGGHPTAL CHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCEEECCCCHHHHHHCCCCCCCC PSTRVYNPAFDVTPHDLISAIVTDRGVVEPAARPAPNLLASVAS CCCCEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC >Mature Secondary Structure MVLALQWQEDAQTIRLLDQTLLPVEERYLDVDTVDALVAAIQSLAVRGAPALGAVGALGV CEEEEEECHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH VVAMRQAEREGWDDERLQVEVDRIRLARPTAVNLAWGVDQVRAAMPSGPETVLKMAKAVV HHHHHHHHHCCCCCCCEEEEEEHEEECCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHH EEDEAANRTLSRLGADWILGRTGRERVRVVTHCNTGALATSAWGTAYGIIHELHDRGALE HCHHHHHHHHHHHCCHHEECCCCCCEEEEEEECCCCCEECCCCHHHHHHHHHHCCCCCEE VVYVDETRPLLQGARLTSWELTRDEIPHLLEVDGAASSTIVRGLVDVAIIGADRITANGD EEEECCCCHHHHCCCCCEEECCHHHCCCEEEECCCCHHHHHHHHHHHEEECCCEEECCCC TANKVGSLALALACQRAGIPFVVAAPSSTVDLATAHGDDIAIEERDAAEVLSLGGHPTAL CHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCCCCEEECCCCHHHHHHCCCCCCCC PSTRVYNPAFDVTPHDLISAIVTDRGVVEPAARPAPNLLASVAS CCCCEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA