| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714655
Identifier: 119714655
GI number: 119714655
Start: 422097
End: 423287
Strand: Reverse
Name: 119714655
Synonym: Noca_0390
Alternate gene names: NA
Gene position: 423287-422097 (Counterclockwise)
Preceding gene: 119714656
Following gene: 119714654
Centisome position: 8.49
GC content: 74.56
Gene sequence:
>1191_bases GTGTGCGACACCATCGTCTTCCGGACCGACTCGGGCATGGTGCTGGCGAAGAACTCCGACCGCGACCCCAACGAGGCCCA GCTGTGGGAATGGACCCCCGCAGCGACGCACGAGGCCGGTGCCCGGTCCCGCACGACGTACGTCGACCTCCCCCAGGTCG CCTGCACCCACGCGACTGTCGTCTCGCGGCCGTGGTGGATGTGGGGAGCCGAGATGGGCGCCAACGAGCACGGCGTGGCG ATCGGCAACGAGGCGGTGTTCACCAAGCAGCGGACCAGCCTGGAGCCCGGGCTGCTCGGCATGGACCTGCTGCGGCTGGC GCTCGAGCGCGCCGCGTCGGCCCGCGAGGCCGTCGAGGTGATCGTCGCGCTGCTCGAGGAGCACGGCCAGGGCGGCGCGT GCAGCGCGGAGCACCGCCGGTTCACCTATCACAACAGCTTCCTGGTCGCGGACCGGGACGGCGCGATCGTCCTCGAGACC GCCGGCCGTCACTGGGCCAGCGAGGACGTCACCGGCGCCCGCAGCATCAGCAACGGGCTCACGATCGCCGGGTTCGCGGA GCGGTACGCCGACCGGCTGCGCGGCCGGGTCGCCGGCTGTGCAGGGCGCCGGTCGCTCACCGAGCGGCGGGCGGGCGGCG CGGAGGGCGTCCTCGACGCGATCTCGATCCTGCGCGACAACGGCACCGACGGCGGCCCGCGATGGTCGCTGCTCAACGGG TCCATGGTCGGCCCGAACATGCACGCGGGCGGCCTGCTCGCGTCCAGCCAGACCGTGTCCTCATGGGTCAGCGACCTCGG GTCCGGCCTGCACTGGGCGACCGGGACGGCCGACCCGGCGCTCTCGCTGTTCGTGCCGTTGCGCGTCGACCAGCCGCTCG CGGAGACGGCGTACCCGACCGCGGGCGTCGACAACCGGCGGGACGACCGGTCGCTGTGGTGGCGCCACGAGCGGCTGCAC CGGACCGCGCTGTGCGACTGGACCGGCGTGGAGGCCCGGCTCGCCGCCGAGCGCGACGAGACGCAGCGGCGTTGGGTCGC GCACCCCGTCCCGACCGCGACCGCGCTCGCCGAGGCCGAGGTGCTGCGGGAGAAGTGGACCGCTGCGGCGGAGGCGGGGA CCGGTGACACCCGGCCGGCGTGGGTGCGCCGGCGGTGGGCGGGCTTCGAGCTGAAGGCGGTGGGTCGGTGA
Upstream 100 bases:
>100_bases GGTCGCCGGCCTCGGGAAGATGCTGACCTCGCGATAACGGGCCGCGGCGGCGGAGCCTGGGGGCTGTCCCGCCGGGCCGG GCGCCCCTACGCTGCGACGC
Downstream 100 bases:
>100_bases GCGACGTCGTGGTGGTGGGCGCCGGGCTGTCCGGGCTGGCGGCCGCCCGGCGCCTGCAGGCGGCGGGCCGGTCCGTCGTC GTGGTCGAGGCGCGGGACCG
Product: peptidase U34, dipeptidase
Products: NA
Alternate protein names: Dipeptidase-Like Protein; Peptidase Family C
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MCDTIVFRTDSGMVLAKNSDRDPNEAQLWEWTPAATHEAGARSRTTYVDLPQVACTHATVVSRPWWMWGAEMGANEHGVA IGNEAVFTKQRTSLEPGLLGMDLLRLALERAASAREAVEVIVALLEEHGQGGACSAEHRRFTYHNSFLVADRDGAIVLET AGRHWASEDVTGARSISNGLTIAGFAERYADRLRGRVAGCAGRRSLTERRAGGAEGVLDAISILRDNGTDGGPRWSLLNG SMVGPNMHAGGLLASSQTVSSWVSDLGSGLHWATGTADPALSLFVPLRVDQPLAETAYPTAGVDNRRDDRSLWWRHERLH RTALCDWTGVEARLAAERDETQRRWVAHPVPTATALAEAEVLREKWTAAAEAGTGDTRPAWVRRRWAGFELKAVGR
Sequences:
>Translated_396_residues MCDTIVFRTDSGMVLAKNSDRDPNEAQLWEWTPAATHEAGARSRTTYVDLPQVACTHATVVSRPWWMWGAEMGANEHGVA IGNEAVFTKQRTSLEPGLLGMDLLRLALERAASAREAVEVIVALLEEHGQGGACSAEHRRFTYHNSFLVADRDGAIVLET AGRHWASEDVTGARSISNGLTIAGFAERYADRLRGRVAGCAGRRSLTERRAGGAEGVLDAISILRDNGTDGGPRWSLLNG SMVGPNMHAGGLLASSQTVSSWVSDLGSGLHWATGTADPALSLFVPLRVDQPLAETAYPTAGVDNRRDDRSLWWRHERLH RTALCDWTGVEARLAAERDETQRRWVAHPVPTATALAEAEVLREKWTAAAEAGTGDTRPAWVRRRWAGFELKAVGR >Mature_396_residues MCDTIVFRTDSGMVLAKNSDRDPNEAQLWEWTPAATHEAGARSRTTYVDLPQVACTHATVVSRPWWMWGAEMGANEHGVA IGNEAVFTKQRTSLEPGLLGMDLLRLALERAASAREAVEVIVALLEEHGQGGACSAEHRRFTYHNSFLVADRDGAIVLET AGRHWASEDVTGARSISNGLTIAGFAERYADRLRGRVAGCAGRRSLTERRAGGAEGVLDAISILRDNGTDGGPRWSLLNG SMVGPNMHAGGLLASSQTVSSWVSDLGSGLHWATGTADPALSLFVPLRVDQPLAETAYPTAGVDNRRDDRSLWWRHERLH RTALCDWTGVEARLAAERDETQRRWVAHPVPTATALAEAEVLREKWTAAAEAGTGDTRPAWVRRRWAGFELKAVGR
Specific function: Unknown
COG id: COG4690
COG function: function code E; Dipeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI38504671, Length=355, Percent_Identity=38.3098591549296, Blast_Score=203, Evalue=3e-52, Organism=Homo sapiens, GI222537730, Length=309, Percent_Identity=41.4239482200647, Blast_Score=202, Evalue=5e-52, Organism=Homo sapiens, GI222537732, Length=330, Percent_Identity=40, Blast_Score=201, Evalue=7e-52, Organism=Homo sapiens, GI302058287, Length=333, Percent_Identity=38.4384384384384, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI224465190, Length=328, Percent_Identity=34.7560975609756, Blast_Score=167, Evalue=1e-41, Organism=Homo sapiens, GI224465194, Length=328, Percent_Identity=34.7560975609756, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI224465187, Length=328, Percent_Identity=34.7560975609756, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI224465192, Length=278, Percent_Identity=34.5323741007194, Blast_Score=138, Evalue=8e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43131; Mature: 43131
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCDTIVFRTDSGMVLAKNSDRDPNEAQLWEWTPAATHEAGARSRTTYVDLPQVACTHATV CCCEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHH VSRPWWMWGAEMGANEHGVAIGNEAVFTKQRTSLEPGLLGMDLLRLALERAASAREAVEV HCCCCEEECHHCCCCCCCEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IVALLEEHGQGGACSAEHRRFTYHNSFLVADRDGAIVLETAGRHWASEDVTGARSISNGL HHHHHHHCCCCCCCCCCCCEEEEECEEEEECCCCEEEEECCCCCCCCCCCCCHHHHCCCC TIAGFAERYADRLRGRVAGCAGRRSLTERRAGGAEGVLDAISILRDNGTDGGPRWSLLNG EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEECC SMVGPNMHAGGLLASSQTVSSWVSDLGSGLHWATGTADPALSLFVPLRVDQPLAETAYPT CEECCCCCCCCEEECHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEEECCCCHHHHCCCC AGVDNRRDDRSLWWRHERLHRTALCDWTGVEARLAAERDETQRRWVAHPVPTATALAEAE CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH VLREKWTAAAEAGTGDTRPAWVRRRWAGFELKAVGR HHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECCC >Mature Secondary Structure MCDTIVFRTDSGMVLAKNSDRDPNEAQLWEWTPAATHEAGARSRTTYVDLPQVACTHATV CCCEEEEECCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCEEEECCHHHHHHHHH VSRPWWMWGAEMGANEHGVAIGNEAVFTKQRTSLEPGLLGMDLLRLALERAASAREAVEV HCCCCEEECHHCCCCCCCEEECCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IVALLEEHGQGGACSAEHRRFTYHNSFLVADRDGAIVLETAGRHWASEDVTGARSISNGL HHHHHHHCCCCCCCCCCCCEEEEECEEEEECCCCEEEEECCCCCCCCCCCCCHHHHCCCC TIAGFAERYADRLRGRVAGCAGRRSLTERRAGGAEGVLDAISILRDNGTDGGPRWSLLNG EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEEECC SMVGPNMHAGGLLASSQTVSSWVSDLGSGLHWATGTADPALSLFVPLRVDQPLAETAYPT CEECCCCCCCCEEECHHHHHHHHHHHCCCCEECCCCCCCCEEEEEEEECCCCHHHHCCCC AGVDNRRDDRSLWWRHERLHRTALCDWTGVEARLAAERDETQRRWVAHPVPTATALAEAE CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHH VLREKWTAAAEAGTGDTRPAWVRRRWAGFELKAVGR HHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA