| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714654
Identifier: 119714654
GI number: 119714654
Start: 420751
End: 422100
Strand: Reverse
Name: 119714654
Synonym: Noca_0389
Alternate gene names: NA
Gene position: 422100-420751 (Counterclockwise)
Preceding gene: 119714655
Following gene: 119714642
Centisome position: 8.47
GC content: 74.0
Gene sequence:
>1350_bases GTGAGCGACGTCGTGGTGGTGGGCGCCGGGCTGTCCGGGCTGGCGGCCGCCCGGCGCCTGCAGGCGGCGGGCCGGTCCGT CGTCGTGGTCGAGGCGCGGGACCGGGTCGGCGGGCGTACCGAGGCCGGGGCGCTCAGCGACGGGCAGTGGATCGAGCTCG GTGGCCAGTGGGTCGGGCCCACCCAGGACCGGATGTACGAGCTCATCGCGGAGCTCGGCTTGGCGACGATCCCGACGTAC AACGACGGCGACATCGTCTTCTCGCTGTGCGGGCGACACGGCCGGCTCGCCGGTCGCAAGGGCGCGGTGCCGCGGCTCAA CCCGTTCGCGATCGCCGACCTCGCGCAGGGCACGCTGCGCTTCGCCCGGCTGGCCCGCCGGGTCGACCTCGACCGACCCT GGGACACCGAGCGCGCCGCGGCCCTCGACGGGCAGACCTTCCGCACCTGGGTGCAGCGCAACCTGCGCACCCCGCAGGGC CGCGCCTACTTCGAGCTCTACTGCGAGGCGGTCTTCTCCGCCGACCTCTCGGACCTCTCGCTGCTGCACGCGCTGTTCTA CACGCACTCCGGCACCGACATGGACACGCTGATGGCTGTGGACCGGGGCGCGCAGCAGGACCGGATCGACGGCGGCTCGT GGCGGATCAGCCAGCGCCTGGCGGAGGGTCTCGACGTCCGGCTCGGCCAGCCGGTCCGGTCGGTCGTCCAGGACGCGGCC GGGGTCCGGGTCGTGACCCGTGACGGCACGTCGTACGACGCGGACCGGGTGATCATCACGCTCCCGCCGGCGCTCGCCGG CCGGCTGGAGTACGACCCGCCGCTGCCCAGCTGGCGCGACCAGCTGACCCAGAAGGTGCCGGCCGGCAGCGTCTTCAAGG TCTACGCCGTCTACCCGACGCCGTTCTGGCGCGAGGACGGGCTCAACGGGCAGGCCGGCTCGGACCTCGGCCCGGTGAAG GTCACCTTCGACAACACCCCGCCCGGCTACGACCGTGGCATCCTGATGGGGTTCATCGAGGCCGCCGACGGCCGGGAGTG GGCCCGCCGTACCCCTGAGGAGAGGCGGGCTGCGGTCGTCGACTGCTTCGTGCGCTACTTCGGTCCCCGGGCCGCCGAGC CGCTGGAGTACGTCGAGCGCGACTGGATGGCCGAGGAGTTCACCCGCGGCTGCTACGGCGCCCACTTCGCTCCGGGCGTG TGGACCGGGTTCGGCCACGCCCTGCGCGAGCCGGTCGGGCGGCTGCACTGGGCCGGCGCGGAGTGCTCGCCGGTCTGGAA CGGCTACATGGAGGGCGCGGTCCGCTCGGGCGAGGCCACCGCCGACGAGGTGCACGCGCTGCTGGGGTGA
Upstream 100 bases:
>100_bases GGGAGAAGTGGACCGCTGCGGCGGAGGCGGGGACCGGTGACACCCGGCCGGCGTGGGTGCGCCGGCGGTGGGCGGGCTTC GAGCTGAAGGCGGTGGGTCG
Downstream 100 bases:
>100_bases GCGGCGCCGCCGTACTGTAACGCCGTGTTACCCCGACTCCCGACCATGTTGCAACACGGTGGGAGGAGCGGGTAAACGGG CGTTACAACAGATCGGCCGG
Product: amine oxidase
Products: RCHO; NH3; H2O2
Alternate protein names: NA
Number of amino acids: Translated: 449; Mature: 448
Protein sequence:
>449_residues MSDVVVVGAGLSGLAAARRLQAAGRSVVVVEARDRVGGRTEAGALSDGQWIELGGQWVGPTQDRMYELIAELGLATIPTY NDGDIVFSLCGRHGRLAGRKGAVPRLNPFAIADLAQGTLRFARLARRVDLDRPWDTERAAALDGQTFRTWVQRNLRTPQG RAYFELYCEAVFSADLSDLSLLHALFYTHSGTDMDTLMAVDRGAQQDRIDGGSWRISQRLAEGLDVRLGQPVRSVVQDAA GVRVVTRDGTSYDADRVIITLPPALAGRLEYDPPLPSWRDQLTQKVPAGSVFKVYAVYPTPFWREDGLNGQAGSDLGPVK VTFDNTPPGYDRGILMGFIEAADGREWARRTPEERRAAVVDCFVRYFGPRAAEPLEYVERDWMAEEFTRGCYGAHFAPGV WTGFGHALREPVGRLHWAGAECSPVWNGYMEGAVRSGEATADEVHALLG
Sequences:
>Translated_449_residues MSDVVVVGAGLSGLAAARRLQAAGRSVVVVEARDRVGGRTEAGALSDGQWIELGGQWVGPTQDRMYELIAELGLATIPTY NDGDIVFSLCGRHGRLAGRKGAVPRLNPFAIADLAQGTLRFARLARRVDLDRPWDTERAAALDGQTFRTWVQRNLRTPQG RAYFELYCEAVFSADLSDLSLLHALFYTHSGTDMDTLMAVDRGAQQDRIDGGSWRISQRLAEGLDVRLGQPVRSVVQDAA GVRVVTRDGTSYDADRVIITLPPALAGRLEYDPPLPSWRDQLTQKVPAGSVFKVYAVYPTPFWREDGLNGQAGSDLGPVK VTFDNTPPGYDRGILMGFIEAADGREWARRTPEERRAAVVDCFVRYFGPRAAEPLEYVERDWMAEEFTRGCYGAHFAPGV WTGFGHALREPVGRLHWAGAECSPVWNGYMEGAVRSGEATADEVHALLG >Mature_448_residues SDVVVVGAGLSGLAAARRLQAAGRSVVVVEARDRVGGRTEAGALSDGQWIELGGQWVGPTQDRMYELIAELGLATIPTYN DGDIVFSLCGRHGRLAGRKGAVPRLNPFAIADLAQGTLRFARLARRVDLDRPWDTERAAALDGQTFRTWVQRNLRTPQGR AYFELYCEAVFSADLSDLSLLHALFYTHSGTDMDTLMAVDRGAQQDRIDGGSWRISQRLAEGLDVRLGQPVRSVVQDAAG VRVVTRDGTSYDADRVIITLPPALAGRLEYDPPLPSWRDQLTQKVPAGSVFKVYAVYPTPFWREDGLNGQAGSDLGPVKV TFDNTPPGYDRGILMGFIEAADGREWARRTPEERRAAVVDCFVRYFGPRAAEPLEYVERDWMAEEFTRGCYGAHFAPGVW TGFGHALREPVGRLHWAGAECSPVWNGYMEGAVRSGEATADEVHALLG
Specific function: Unknown
COG id: COG1231
COG function: function code E; Monoamine oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flavin monoamine oxidase family [H]
Homologues:
Organism=Homo sapiens, GI38202207, Length=444, Percent_Identity=34.6846846846847, Blast_Score=266, Evalue=2e-71, Organism=Homo sapiens, GI4557735, Length=455, Percent_Identity=33.1868131868132, Blast_Score=266, Evalue=2e-71, Organism=Homo sapiens, GI116256451, Length=90, Percent_Identity=36.6666666666667, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001613 - InterPro: IPR002937 [H]
Pfam domain/function: PF01593 Amino_oxidase [H]
EC number: 1.4.3.4
Molecular weight: Translated: 49225; Mature: 49094
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDVVVVGAGLSGLAAARRLQAAGRSVVVVEARDRVGGRTEAGALSDGQWIELGGQWVGP CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCEECCC TQDRMYELIAELGLATIPTYNDGDIVFSLCGRHGRLAGRKGAVPRLNPFAIADLAQGTLR CHHHHHHHHHHCCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH FARLARRVDLDRPWDTERAAALDGQTFRTWVQRNLRTPQGRAYFELYCEAVFSADLSDLS HHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHH LLHALFYTHSGTDMDTLMAVDRGAQQDRIDGGSWRISQRLAEGLDVRLGQPVRSVVQDAA HHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCC GVRVVTRDGTSYDADRVIITLPPALAGRLEYDPPLPSWRDQLTQKVPAGSVFKVYAVYPT CEEEEEECCCCCCCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCC PFWREDGLNGQAGSDLGPVKVTFDNTPPGYDRGILMGFIEAADGREWARRTPEERRAAVV CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHCCCHHHHHHHH DCFVRYFGPRAAEPLEYVERDWMAEEFTRGCYGAHFAPGVWTGFGHALREPVGRLHWAGA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEECCC ECSPVWNGYMEGAVRSGEATADEVHALLG CCCHHHHHHHHHHCCCCCCCHHHHHHHCC >Mature Secondary Structure SDVVVVGAGLSGLAAARRLQAAGRSVVVVEARDRVGGRTEAGALSDGQWIELGGQWVGP CCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEEECCEECCC TQDRMYELIAELGLATIPTYNDGDIVFSLCGRHGRLAGRKGAVPRLNPFAIADLAQGTLR CHHHHHHHHHHCCCCCCCCCCCCCHHEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH FARLARRVDLDRPWDTERAAALDGQTFRTWVQRNLRTPQGRAYFELYCEAVFSADLSDLS HHHHHHHCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHH LLHALFYTHSGTDMDTLMAVDRGAQQDRIDGGSWRISQRLAEGLDVRLGQPVRSVVQDAA HHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHCC GVRVVTRDGTSYDADRVIITLPPALAGRLEYDPPLPSWRDQLTQKVPAGSVFKVYAVYPT CEEEEEECCCCCCCCEEEEECCHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCC PFWREDGLNGQAGSDLGPVKVTFDNTPPGYDRGILMGFIEAADGREWARRTPEERRAAVV CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHCCCCHHHHCCCHHHHHHHH DCFVRYFGPRAAEPLEYVERDWMAEEFTRGCYGAHFAPGVWTGFGHALREPVGRLHWAGA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEEECCC ECSPVWNGYMEGAVRSGEATADEVHALLG CCCHHHHHHHHHHCCCCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: RCH2NH2; H2O; O2
Specific reaction: RCH2NH2 + H2O + O2 = RCHO + NH3 + H2O2
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]