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The map label for this gene is nudL [H]

Identifier: 119714608

GI number: 119714608

Start: 363420

End: 364139

Strand: Direct

Name: nudL [H]

Synonym: Noca_0342

Alternate gene names: 119714608

Gene position: 363420-364139 (Clockwise)

Preceding gene: 119714607

Following gene: 119714609

Centisome position: 7.29

GC content: 73.06

Gene sequence:

>720_bases
GTGATCCCCGACTGGCTGGTGCCGGTCCGCGACGGCGCGGCCGCCATCTCGGCCGACCAGCTCACCAGGTTCACCCCTCC
GGCGGGTGGAGACGCCCGGCGTGGAGCGGTGCTGATGCTGTTCGGCGCGGGCGAGCAGGGCGGCGAGCTGCTGCTCACCG
AGCGGGCCCACGACATGCGCTCCCACCCCGGTCAGGTCTCCTTCCCGGGTGGCGCGCTCGACCCGGGCGAGACCCCCGTC
GAGGCCGCGCTCCGCGAGGCCGAGGAGGAGGTCGGGGTGGACCCGGCCTCGGTCGAGGTGTTCGGCCGGCTGCCCGAGCT
GTGGCTACCGCCGAGCAACTTCGCGGTCACCCCGGTTCTCGGCTGGTGGCGCGAGCCCGGCGACGTGAGCATCGTCAGCC
AGGCCGAGGTGCACGCGATCCACCACGTCCCGATCAGCGAGCTGCTCGACCCCGAGCACCGGATCACCGTCCGCCACCCC
CGGGGCGGCTACCAGAGCCCGGGCTTCCTGATCGGCCCCGACCACGACGTCGTCCTCTGGGGCTTCACGGGCGGGATCAT
CGCCCGCCTCTTCGACTTCCTCGGCTGGACCCGGCCGTGGGACGAGTCGCGCCTGCGCGACCTGCCGTCGTACATGCTGC
AGGCTGACCCACGACGCGGTCGGCTCCTCGACATCGAGGACGACCAGGACGACGACCAGGACGAGGAGGAGGACGGGTGA

Upstream 100 bases:

>100_bases
TGGTCGACGCCGACGGCAAGGTCGTGCACAAGCAGGCGATCGAGATCACCAGCGTCGACCAGCTCGTCGGCCTGGTCGAC
GAGCACCTCGGGACCGACCT

Downstream 100 bases:

>100_bases
ACCTGCTCGACTGGCTCCTGGTCGTGCTCGTGCTCGCCTACGCGCTCTCCGGCTACTGGCAGGGCTTCATCACCGGTGCC
TTCGCGACCGGGGGGCTGCT

Product: NUDIX hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 239

Protein sequence:

>239_residues
MIPDWLVPVRDGAAAISADQLTRFTPPAGGDARRGAVLMLFGAGEQGGELLLTERAHDMRSHPGQVSFPGGALDPGETPV
EAALREAEEEVGVDPASVEVFGRLPELWLPPSNFAVTPVLGWWREPGDVSIVSQAEVHAIHHVPISELLDPEHRITVRHP
RGGYQSPGFLIGPDHDVVLWGFTGGIIARLFDFLGWTRPWDESRLRDLPSYMLQADPRRGRLLDIEDDQDDDQDEEEDG

Sequences:

>Translated_239_residues
MIPDWLVPVRDGAAAISADQLTRFTPPAGGDARRGAVLMLFGAGEQGGELLLTERAHDMRSHPGQVSFPGGALDPGETPV
EAALREAEEEVGVDPASVEVFGRLPELWLPPSNFAVTPVLGWWREPGDVSIVSQAEVHAIHHVPISELLDPEHRITVRHP
RGGYQSPGFLIGPDHDVVLWGFTGGIIARLFDFLGWTRPWDESRLRDLPSYMLQADPRRGRLLDIEDDQDDDQDEEEDG
>Mature_239_residues
MIPDWLVPVRDGAAAISADQLTRFTPPAGGDARRGAVLMLFGAGEQGGELLLTERAHDMRSHPGQVSFPGGALDPGETPV
EAALREAEEEVGVDPASVEVFGRLPELWLPPSNFAVTPVLGWWREPGDVSIVSQAEVHAIHHVPISELLDPEHRITVRHP
RGGYQSPGFLIGPDHDVVLWGFTGGIIARLFDFLGWTRPWDESRLRDLPSYMLQADPRRGRLLDIEDDQDDDQDEEEDG

Specific function: Probably mediates the hydrolysis of some nucleoside diphosphate derivatives [H]

COG id: COG0494

COG function: function code LR; NTP pyrophosphohydrolases including oxidative damage repair enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17536993, Length=122, Percent_Identity=40.1639344262295, Blast_Score=95, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17510677, Length=132, Percent_Identity=32.5757575757576, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI18859683, Length=177, Percent_Identity=32.7683615819209, Blast_Score=71, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000086
- InterPro:   IPR015797
- InterPro:   IPR000059 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 26300; Mature: 26300

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: PS00893 NUDIX ; PS01293 UPF0035

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPDWLVPVRDGAAAISADQLTRFTPPAGGDARRGAVLMLFGAGEQGGELLLTERAHDMR
CCCCCEEECCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCHHHHH
SHPGQVSFPGGALDPGETPVEAALREAEEEVGVDPASVEVFGRLPELWLPPSNFAVTPVL
CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCCEEECHH
GWWREPGDVSIVSQAEVHAIHHVPISELLDPEHRITVRHPRGGYQSPGFLIGPDHDVVLW
HCCCCCCCEEEEECCCEEEEECCCHHHHCCCCCEEEEECCCCCCCCCCEEECCCCCEEEE
GFTGGIIARLFDFLGWTRPWDESRLRDLPSYMLQADPRRGRLLDIEDDQDDDQDEEEDG
ECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCC
>Mature Secondary Structure
MIPDWLVPVRDGAAAISADQLTRFTPPAGGDARRGAVLMLFGAGEQGGELLLTERAHDMR
CCCCCEEECCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCEEEEECCHHHHH
SHPGQVSFPGGALDPGETPVEAALREAEEEVGVDPASVEVFGRLPELWLPPSNFAVTPVL
CCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHCCCHHCCCCCCCEEECHH
GWWREPGDVSIVSQAEVHAIHHVPISELLDPEHRITVRHPRGGYQSPGFLIGPDHDVVLW
HCCCCCCCEEEEECCCEEEEECCCHHHHCCCCCEEEEECCCCCCCCCCEEECCCCCEEEE
GFTGGIIARLFDFLGWTRPWDESRLRDLPSYMLQADPRRGRLLDIEDDQDDDQDEEEDG
ECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA