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The map label for this gene is scoB [H]

Identifier: 119714597

GI number: 119714597

Start: 354973

End: 355617

Strand: Direct

Name: scoB [H]

Synonym: Noca_0331

Alternate gene names: 119714597

Gene position: 354973-355617 (Clockwise)

Preceding gene: 119714596

Following gene: 119714599

Centisome position: 7.12

GC content: 67.44

Gene sequence:

>645_bases
ATGAGCTGGAGTCGTGAGGAGATGGCGGCGCGGGCGGCCTCGGAGCTCTCCGACGGGTCGTACGTGAACCTCGGGATCGG
GCTGCCGACGATGGTGCCCAACTACGTCGGCGACGACGTGGAGCTGGTCCTGCAGAGCGAGAACGGCATCCTCGGCGTGG
GCGCCTATCCGTTCGACGGCGAGGAGGACCCGGACCTGATCAACGCGGGCAAGGAGACGGTCACCCTGCGCCGGGGGGCG
TCGTTCTTCGACTCCGCCACCAGCTTCGGGATGATCCGGGGCGGGAAGATCGACGCCGCGATCCTGGGCGCGATGCAGGT
CTCGAAGGCCGGGGACATCGCGAACTGGATGATCCCCGGAAAGATGGTCAAGGGCATGGGCGGCGCGATGGACCTGGTCC
ACGGCGCGAAGCGGGTGATCGTGCTGATGGAGCACGTCGCGAAGGACGGCTCCTACAAGATCGTCGAGGAGTGCTCGCTG
CCCTACACCGGCAAGGGCGTGGTCCAGCGGATCATCACCGACCTCGCCGTCATCGACGTGACTCGTGAGGGTTTGGAGCT
GGTCGAGCTCGCCCCGGGGGTCAGCCTCGACGAGGTGCGCGAGAAGACCGAGCCCGAGCTGGTCGCGGCGAACGTCGAGT
CGTGA

Upstream 100 bases:

>100_bases
AGGTGCACACCCCGGGGGTGTTCGTGCAGCGGGTGGTGGAGCTGACCCCGGAGCAGGCCGCGGACAAGCGGATCGAGAAG
AAGACGGTGAGGGCACGCGG

Downstream 100 bases:

>100_bases
CTTCTGGCGGTCGAGTCGGGCGAACCGACCGACGGAAACCCCGATTCGACGGGTAGCACTCCCGATTCATCGGCCGGCCG
CCCCGGTTCCACGCTCTAGG

Product: butyryl-CoA:acetate CoA transferase

Products: NA

Alternate protein names: OXCT B; Succinyl CoA:3-oxoacid CoA-transferase [H]

Number of amino acids: Translated: 214; Mature: 213

Protein sequence:

>214_residues
MSWSREEMAARAASELSDGSYVNLGIGLPTMVPNYVGDDVELVLQSENGILGVGAYPFDGEEDPDLINAGKETVTLRRGA
SFFDSATSFGMIRGGKIDAAILGAMQVSKAGDIANWMIPGKMVKGMGGAMDLVHGAKRVIVLMEHVAKDGSYKIVEECSL
PYTGKGVVQRIITDLAVIDVTREGLELVELAPGVSLDEVREKTEPELVAANVES

Sequences:

>Translated_214_residues
MSWSREEMAARAASELSDGSYVNLGIGLPTMVPNYVGDDVELVLQSENGILGVGAYPFDGEEDPDLINAGKETVTLRRGA
SFFDSATSFGMIRGGKIDAAILGAMQVSKAGDIANWMIPGKMVKGMGGAMDLVHGAKRVIVLMEHVAKDGSYKIVEECSL
PYTGKGVVQRIITDLAVIDVTREGLELVELAPGVSLDEVREKTEPELVAANVES
>Mature_213_residues
SWSREEMAARAASELSDGSYVNLGIGLPTMVPNYVGDDVELVLQSENGILGVGAYPFDGEEDPDLINAGKETVTLRRGAS
FFDSATSFGMIRGGKIDAAILGAMQVSKAGDIANWMIPGKMVKGMGGAMDLVHGAKRVIVLMEHVAKDGSYKIVEECSLP
YTGKGVVQRIITDLAVIDVTREGLELVELAPGVSLDEVREKTEPELVAANVES

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG2057

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=201, Percent_Identity=59.7014925373134, Blast_Score=240, Evalue=6e-64,
Organism=Homo sapiens, GI11545841, Length=202, Percent_Identity=54.950495049505, Blast_Score=218, Evalue=3e-57,
Organism=Escherichia coli, GI1788552, Length=212, Percent_Identity=49.5283018867925, Blast_Score=209, Evalue=1e-55,
Organism=Caenorhabditis elegans, GI17531517, Length=202, Percent_Identity=59.9009900990099, Blast_Score=244, Evalue=2e-65,
Organism=Drosophila melanogaster, GI21358325, Length=201, Percent_Identity=56.7164179104478, Blast_Score=224, Evalue=4e-59,
Organism=Drosophila melanogaster, GI24655794, Length=201, Percent_Identity=56.7164179104478, Blast_Score=224, Evalue=5e-59,

Paralogues:

None

Copy number: 369 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012791
- InterPro:   IPR004165
- InterPro:   IPR004164 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.5 [H]

Molecular weight: Translated: 22746; Mature: 22615

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: PS01274 COA_TRANSF_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSWSREEMAARAASELSDGSYVNLGIGLPTMVPNYVGDDVELVLQSENGILGVGAYPFDG
CCCCHHHHHHHHHHHCCCCCEEEECCCCHHHCCHHCCCCEEEEEECCCCEEEECCCCCCC
EEDPDLINAGKETVTLRRGASFFDSATSFGMIRGGKIDAAILGAMQVSKAGDIANWMIPG
CCCCHHHHCCCCEEEEECCCHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCCCHHHCCCH
KMVKGMGGAMDLVHGAKRVIVLMEHVAKDGSYKIVEECSLPYTGKGVVQRIITDLAVIDV
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCHHHHHHHHHHHHHHHH
TREGLELVELAPGVSLDEVREKTEPELVAANVES
HHHHHHHHHHCCCCCHHHHHHHCCCCEEEECCCC
>Mature Secondary Structure 
SWSREEMAARAASELSDGSYVNLGIGLPTMVPNYVGDDVELVLQSENGILGVGAYPFDG
CCCHHHHHHHHHHHCCCCCEEEECCCCHHHCCHHCCCCEEEEEECCCCEEEECCCCCCC
EEDPDLINAGKETVTLRRGASFFDSATSFGMIRGGKIDAAILGAMQVSKAGDIANWMIPG
CCCCHHHHCCCCEEEEECCCHHHHHHHHCCEEECCCCHHHHHHHHHHHCCCCCHHHCCCH
KMVKGMGGAMDLVHGAKRVIVLMEHVAKDGSYKIVEECSLPYTGKGVVQRIITDLAVIDV
HHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCCCCCHHHHHHHHHHHHHHHH
TREGLELVELAPGVSLDEVREKTEPELVAANVES
HHHHHHHHHHCCCCCHHHHHHHCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]