| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714586
Identifier: 119714586
GI number: 119714586
Start: 343211
End: 343804
Strand: Direct
Name: 119714586
Synonym: Noca_0320
Alternate gene names: NA
Gene position: 343211-343804 (Clockwise)
Preceding gene: 119714585
Following gene: 119714587
Centisome position: 6.88
GC content: 69.02
Gene sequence:
>594_bases ATGACTGAGACCACGATCGACCACGAGACCGAGGAGTTCGCCCAGCAGATCGCCGACCAGGTCGAGAGCTTCCTGATCGC GTTGCAGGCCATCGCCCGCGAGGCCGACGGCGGCCGGGCGATCTCGCTGCTGCTGCTGGAGATCAGCCAGGTGCTGCTCG CGGGCGCCCGGCTGGGCGCGCAGCGCGACTTCAAGCCCGAGGGCGAGTACCAGCCCGACGTCGGGCCGGAGCCCGATCTC GACGAGATGCGGCTGCGGCTGGCGTCGATGCTCGACAGCGTCGACACCTACAGCTTCGTGTTCGACCCCTACGTCCCCGA CGTGGTGGAGAGCCAGCTCTCCGACGACCTGACCAGCATCGCCACCGACCTCGAGAACGGGCTGCGCCACTACCGGCTCG GCAACGTCGACGAGGCGCTGTGGTGGTGGCAGTTCTCGTACGTCGCCTCCTGGGGCAACCTCGCGGGCGCCGCTCTCAAC GCGCTGTTGTCGATCGTGGCGCACGACCGCCTGGACGCCGAGTTCACCGGCGAGGACGAGCAGCTCGCGCTCGCCGATGA GATGTTGGAGGGTGGCGAGCCCACCGCTCGGTAG
Upstream 100 bases:
>100_bases CGCGTGACGCGGCTTGCGAGTGGACTGCCAGTAGGCGGTGATCTGGAGTACGCCGACGAGGTGACCCTGGGCCGCGCGTT CGCAGGAAGGCGATCAGCAG
Downstream 100 bases:
>100_bases ACTCGACGGCTGGCAGCACACCGAGCCAGCAGTCGAGCAGTAGGGACCAACCGTGGGCATTGTCGTCCAGAAGTACGGCG GATCGTCGGTCGCGGACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 197; Mature: 196
Protein sequence:
>197_residues MTETTIDHETEEFAQQIADQVESFLIALQAIAREADGGRAISLLLLEISQVLLAGARLGAQRDFKPEGEYQPDVGPEPDL DEMRLRLASMLDSVDTYSFVFDPYVPDVVESQLSDDLTSIATDLENGLRHYRLGNVDEALWWWQFSYVASWGNLAGAALN ALLSIVAHDRLDAEFTGEDEQLALADEMLEGGEPTAR
Sequences:
>Translated_197_residues MTETTIDHETEEFAQQIADQVESFLIALQAIAREADGGRAISLLLLEISQVLLAGARLGAQRDFKPEGEYQPDVGPEPDL DEMRLRLASMLDSVDTYSFVFDPYVPDVVESQLSDDLTSIATDLENGLRHYRLGNVDEALWWWQFSYVASWGNLAGAALN ALLSIVAHDRLDAEFTGEDEQLALADEMLEGGEPTAR >Mature_196_residues TETTIDHETEEFAQQIADQVESFLIALQAIAREADGGRAISLLLLEISQVLLAGARLGAQRDFKPEGEYQPDVGPEPDLD EMRLRLASMLDSVDTYSFVFDPYVPDVVESQLSDDLTSIATDLENGLRHYRLGNVDEALWWWQFSYVASWGNLAGAALNA LLSIVAHDRLDAEFTGEDEQLALADEMLEGGEPTAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21804; Mature: 21673
Theoretical pI: Translated: 3.77; Mature: 3.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTETTIDHETEEFAQQIADQVESFLIALQAIAREADGGRAISLLLLEISQVLLAGARLGA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC QRDFKPEGEYQPDVGPEPDLDEMRLRLASMLDSVDTYSFVFDPYVPDVVESQLSDDLTSI CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ATDLENGLRHYRLGNVDEALWWWQFSYVASWGNLAGAALNALLSIVAHDRLDAEFTGEDE HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH QLALADEMLEGGEPTAR HHHHHHHHHCCCCCCCC >Mature Secondary Structure TETTIDHETEEFAQQIADQVESFLIALQAIAREADGGRAISLLLLEISQVLLAGARLGA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCC QRDFKPEGEYQPDVGPEPDLDEMRLRLASMLDSVDTYSFVFDPYVPDVVESQLSDDLTSI CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH ATDLENGLRHYRLGNVDEALWWWQFSYVASWGNLAGAALNALLSIVAHDRLDAEFTGEDE HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH QLALADEMLEGGEPTAR HHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA