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The map label for this gene is recR

Identifier: 119714585

GI number: 119714585

Start: 342619

End: 343218

Strand: Direct

Name: recR

Synonym: Noca_0319

Alternate gene names: 119714585

Gene position: 342619-343218 (Clockwise)

Preceding gene: 119714584

Following gene: 119714586

Centisome position: 6.87

GC content: 68.33

Gene sequence:

>600_bases
TTGTACGAGGGCGTCGTCCAGGACCTGATCGACGAGCTCGGTCGGCTGCCGGGCGTCGGTCCCAAGGGCGCGCAGCGGAT
CGCGTTCCACCTGTTGCAGGCCGACCCCGCCGACGTACGCCGCCTCGCCGATGTGCTGCTCGAGGTGAAGGCGAAGGTCA
AGTTCTGCAGCATCTGCTTCAACGTCTCCCAGGACGACCAGTGCCGGATCTGCCGCGACCCGCGGCGCGACCCGTCGGTG
CTGTGCGTGGTCGAGGAGTACAAGGACGTGGTCGCCATCGAGCGGACCCGTGAGTTCCGCGGCCGCTACCACGTGCTCGG
CGGGGCCATCTCGCCGATCGACGGGGTCGGACCGGAGCAGCTGCGGATCCGGGAGCTGATGGTGCGGCTGGCCGACGGCA
CGATCACCGAGGTGATCCTGGCGACCGACCCCAACCTCGAGGGGGAGGCGACTGCGACCTACCTCACCCGGATGCTCAAG
CCCCTGGAGTTGCGCGTGACGCGGCTTGCGAGTGGACTGCCAGTAGGCGGTGATCTGGAGTACGCCGACGAGGTGACCCT
GGGCCGCGCGTTCGCAGGAAGGCGATCAGCAGATGACTGA

Upstream 100 bases:

>100_bases
GCCAAGGCCCAGGCCGACGCGCTCGCGGGCGAGGCCCTCGGCCCGCTGGCCGGCGGCGCCGAGGGGCTGCCCGGCATGCC
GGGCCAGCTGGGGTTCTAGG

Downstream 100 bases:

>100_bases
GACCACGATCGACCACGAGACCGAGGAGTTCGCCCAGCAGATCGCCGACCAGGTCGAGAGCTTCCTGATCGCGTTGCAGG
CCATCGCCCGCGAGGCCGAC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MYEGVVQDLIDELGRLPGVGPKGAQRIAFHLLQADPADVRRLADVLLEVKAKVKFCSICFNVSQDDQCRICRDPRRDPSV
LCVVEEYKDVVAIERTREFRGRYHVLGGAISPIDGVGPEQLRIRELMVRLADGTITEVILATDPNLEGEATATYLTRMLK
PLELRVTRLASGLPVGGDLEYADEVTLGRAFAGRRSADD

Sequences:

>Translated_199_residues
MYEGVVQDLIDELGRLPGVGPKGAQRIAFHLLQADPADVRRLADVLLEVKAKVKFCSICFNVSQDDQCRICRDPRRDPSV
LCVVEEYKDVVAIERTREFRGRYHVLGGAISPIDGVGPEQLRIRELMVRLADGTITEVILATDPNLEGEATATYLTRMLK
PLELRVTRLASGLPVGGDLEYADEVTLGRAFAGRRSADD
>Mature_199_residues
MYEGVVQDLIDELGRLPGVGPKGAQRIAFHLLQADPADVRRLADVLLEVKAKVKFCSICFNVSQDDQCRICRDPRRDPSV
LCVVEEYKDVVAIERTREFRGRYHVLGGAISPIDGVGPEQLRIRELMVRLADGTITEVILATDPNLEGEATATYLTRMLK
PLELRVTRLASGLPVGGDLEYADEVTLGRAFAGRRSADD

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=192, Percent_Identity=45.3125, Blast_Score=172, Evalue=2e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_NOCSJ (A1SDH8)

Other databases:

- EMBL:   CP000509
- RefSeq:   YP_921550.1
- ProteinModelPortal:   A1SDH8
- SMR:   A1SDH8
- STRING:   A1SDH8
- GeneID:   4597955
- GenomeReviews:   CP000509_GR
- KEGG:   nca:Noca_0319
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- PhylomeDB:   A1SDH8
- ProtClustDB:   PRK00076
- BioCyc:   NSP35761:NOCA_0319-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21992; Mature: 21992

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEGVVQDLIDELGRLPGVGPKGAQRIAFHLLQADPADVRRLADVLLEVKAKVKFCSICF
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEE
NVSQDDQCRICRDPRRDPSVLCVVEEYKDVVAIERTREFRGRYHVLGGAISPIDGVGPEQ
CCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHH
LRIRELMVRLADGTITEVILATDPNLEGEATATYLTRMLKPLELRVTRLASGLPVGGDLE
HHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
YADEVTLGRAFAGRRSADD
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MYEGVVQDLIDELGRLPGVGPKGAQRIAFHLLQADPADVRRLADVLLEVKAKVKFCSICF
CCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHEE
NVSQDDQCRICRDPRRDPSVLCVVEEYKDVVAIERTREFRGRYHVLGGAISPIDGVGPEQ
CCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHH
LRIRELMVRLADGTITEVILATDPNLEGEATATYLTRMLKPLELRVTRLASGLPVGGDLE
HHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
YADEVTLGRAFAGRRSADD
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA