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The map label for this gene is ybaB [C]

Identifier: 119714584

GI number: 119714584

Start: 342243

End: 342617

Strand: Direct

Name: ybaB [C]

Synonym: Noca_0318

Alternate gene names: 119714584

Gene position: 342243-342617 (Clockwise)

Preceding gene: 119714583

Following gene: 119714585

Centisome position: 6.86

GC content: 71.73

Gene sequence:

>375_bases
ATGAGCCAGAACCCCTTCGAAGCCCTTGGTGGCGGAGGGTTCGACATGAACGCCCTGCTGCAGCAGGCCCAGCAGATGCA
GGAGCAGCTGCAGAGTGCCCAGGAGCGCCTCACCGAGACCGTCGTGGACGGCACCGTGGCCGGTGGCGCGGTGACCGTGA
AGGTCAACGGCGTCGGCGAGCTGGTCGGTGTGGAGATCAGGGCCGGCGGCTTCGACGGCAGCGACCCCGACGACCTGTCC
GACCTCGGTGACATGATCATCGCGGCCTACCGGGACGCCAAGGCCCAGGCCGACGCGCTCGCGGGCGAGGCCCTCGGCCC
GCTGGCCGGCGGCGCCGAGGGGCTGCCCGGCATGCCGGGCCAGCTGGGGTTCTAG

Upstream 100 bases:

>100_bases
CGCGAGCTCGGCGCGCAGATGATCGAGGAGATCCGCCACCAGTGAGCCCGTACTGCCCGTGCCGACCCGTGACGACCCAG
CGACCACCAGAGGTGAACCC

Downstream 100 bases:

>100_bases
GTTGTACGAGGGCGTCGTCCAGGACCTGATCGACGAGCTCGGTCGGCTGCCGGGCGTCGGTCCCAAGGGCGCGCAGCGGA
TCGCGTTCCACCTGTTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 124; Mature: 123

Protein sequence:

>124_residues
MSQNPFEALGGGGFDMNALLQQAQQMQEQLQSAQERLTETVVDGTVAGGAVTVKVNGVGELVGVEIRAGGFDGSDPDDLS
DLGDMIIAAYRDAKAQADALAGEALGPLAGGAEGLPGMPGQLGF

Sequences:

>Translated_124_residues
MSQNPFEALGGGGFDMNALLQQAQQMQEQLQSAQERLTETVVDGTVAGGAVTVKVNGVGELVGVEIRAGGFDGSDPDDLS
DLGDMIIAAYRDAKAQADALAGEALGPLAGGAEGLPGMPGQLGF
>Mature_123_residues
SQNPFEALGGGGFDMNALLQQAQQMQEQLQSAQERLTETVVDGTVAGGAVTVKVNGVGELVGVEIRAGGFDGSDPDDLSD
LGDMIIAAYRDAKAQADALAGEALGPLAGGAEGLPGMPGQLGF

Specific function: Unknown

COG id: COG0718

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0133 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y318_NOCSJ (A1SDH7)

Other databases:

- EMBL:   CP000509
- RefSeq:   YP_921549.1
- ProteinModelPortal:   A1SDH7
- SMR:   A1SDH7
- STRING:   A1SDH7
- GeneID:   4597954
- GenomeReviews:   CP000509_GR
- KEGG:   nca:Noca_0318
- eggNOG:   COG0718
- HOGENOM:   HBG734215
- OMA:   RDATTNA
- BioCyc:   NSP35761:NOCA_0318-MONOMER
- HAMAP:   MF_00274
- InterPro:   IPR004401
- Gene3D:   G3DSA:3.30.1310.10
- PIRSF:   PIRSF004555
- TIGRFAMs:   TIGR00103

Pfam domain/function: PF02575 DUF149; SSF82607 CHP00103

EC number: NA

Molecular weight: Translated: 12491; Mature: 12360

Theoretical pI: Translated: 3.63; Mature: 3.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNPFEALGGGGFDMNALLQQAQQMQEQLQSAQERLTETVVDGTVAGGAVTVKVNGVGE
CCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
LVGVEIRAGGFDGSDPDDLSDLGDMIIAAYRDAKAQADALAGEALGPLAGGAEGLPGMPG
EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
QLGF
CCCC
>Mature Secondary Structure 
SQNPFEALGGGGFDMNALLQQAQQMQEQLQSAQERLTETVVDGTVAGGAVTVKVNGVGE
CCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCC
LVGVEIRAGGFDGSDPDDLSDLGDMIIAAYRDAKAQADALAGEALGPLAGGAEGLPGMPG
EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
QLGF
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA