| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714574
Identifier: 119714574
GI number: 119714574
Start: 326594
End: 327949
Strand: Direct
Name: 119714574
Synonym: Noca_0307
Alternate gene names: NA
Gene position: 326594-327949 (Clockwise)
Preceding gene: 119714573
Following gene: 119714575
Centisome position: 6.55
GC content: 76.77
Gene sequence:
>1356_bases ATGACCCAGGCGACCGCCGGCAGGTCCGGCCTGGTCCGGGTGACGGTCGCCTCCGGCGCCCGCCGCGTGGACCTCGTCCT GCCGGGCGCAGTGCCGGTCGCCGAGCTGGTTCCCGAGCTGGCCCGCAGCGTCGGCCTGCTCGACCCGGCCACGGTCTACG CCGGCTACCGTCTCGTGACCGCTGAGGGGCGCCGGCTCGCGGGCGACGCCGGCCTGGTGATCCAGGGCGTCGAGGACGGC GGCCTGCTGACGGTCGCGGCCGGTGTCGACGACGAGCCGCCCCGCGTCTACGACGACGTCGTCGAGGCGATGACCGACGT GGTCGAGCACGACCTGCGGCCCTGGGAGCCGGCGTCGGGACGCCGTACCGCCCTCGTGGCCGCCGGCCTGCTGATGGCGC TGGGCGCGGTGGCGCTGCTGATCCAGCGCGGCTCGCTGCTCGCCGGCGCCACGGCGGTCGTGGTCGCGGTCACCCTGACG GCCGCAGCGGTCGTGCTCTCCCGTGCGCAGCGCGAGGCCGAGGCCGGGGTCGCGGTCGCCTGGATGGCGACCGGGTACGC CGCGGTCGCCGGGCTGCTGCTGGTGACCGAGGACGACCCGTTCTTCGGGCTGCCCGTCGCGGCCGCAGGAGGGGCCGTTC TGCTCACCGGGCTGGCCGGCCTCGTCGGCCTCGGCGCGGGCCGCGCCCTGGCGATCCCGCCCGTGGTGGTCGGCGCGGTC TTCCTCGCGACCGGGCTGGTGATGCGGGCCGCCGAGTTCGACCCCGCGGCCGTGCTCACGTCGACGCTGGTCCTGGTGGT GCTCGCCGGGAGCGTGCTCCCGTGGCTGGCCCTGGCGGTGACCGGCACGTCGGTCGACCCGATGTACACGGTCGCGGACG TCACCGCCGAGCCACGGCCGATCGACCCGGCCCGGGTCGCCGCGGACGCCCGCGTCGCCCACGAGATCCTGGTCGCCGTC TCGGCGACCGTCGGTCTCCTGCTCGTCGTGGTGGCGCCACTGGCGGTCTCGCTGGGCGTCGCCGGGACGGTCCTCGCGGT GCTGTGCTGCCTGGTCGTGATGCTGCGGACCCGCCAGTACCGCACCGGCTCGGAGGTCCTGGTCGGCCTGGTGTCCGGGG TGGTCGGGCTGCTCGCGGTGGCGGCCTCGATGCTGTGGCTGCACCCCGACTGGCGCCCCACGGCCGCGGTCGTGCTCGCC GCGACCGGGGCGGCGCTCCTCGCGCTGACCATGCTGCCCGCGCCGCCGTCGGTGCGCCGTGGGCGCCTCGGCGACCTCGC CGAGACCGTCGCGCTGCTGGGCCTGCTGCCGCTGCTCGTCCTCGCGACGGGCCTGTTCGACGCCATCCGGTCCTGA
Upstream 100 bases:
>100_bases GCGCGAACGGCGTCGACCCCTTTCGCCGGAGCGCGCGCCCGGGTCCCGGCCCGAGATCGAGCCGGCACCGAGCTGAGAGG TACCGACAGGAGGTGGATCG
Downstream 100 bases:
>100_bases GGCCACGACCGTGGCCACCAAGAAGGATCTCGTCGAGGCGTACTCGTTCAGCCGGCGCCGGCTCGTCACGGCGTTCGTCT CCGGAGCGCCGGGCGGCCGC
Product: CD9/CD37/CD63 antigen
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 451; Mature: 450
Protein sequence:
>451_residues MTQATAGRSGLVRVTVASGARRVDLVLPGAVPVAELVPELARSVGLLDPATVYAGYRLVTAEGRRLAGDAGLVIQGVEDG GLLTVAAGVDDEPPRVYDDVVEAMTDVVEHDLRPWEPASGRRTALVAAGLLMALGAVALLIQRGSLLAGATAVVVAVTLT AAAVVLSRAQREAEAGVAVAWMATGYAAVAGLLLVTEDDPFFGLPVAAAGGAVLLTGLAGLVGLGAGRALAIPPVVVGAV FLATGLVMRAAEFDPAAVLTSTLVLVVLAGSVLPWLALAVTGTSVDPMYTVADVTAEPRPIDPARVAADARVAHEILVAV SATVGLLLVVVAPLAVSLGVAGTVLAVLCCLVVMLRTRQYRTGSEVLVGLVSGVVGLLAVAASMLWLHPDWRPTAAVVLA ATGAALLALTMLPAPPSVRRGRLGDLAETVALLGLLPLLVLATGLFDAIRS
Sequences:
>Translated_451_residues MTQATAGRSGLVRVTVASGARRVDLVLPGAVPVAELVPELARSVGLLDPATVYAGYRLVTAEGRRLAGDAGLVIQGVEDG GLLTVAAGVDDEPPRVYDDVVEAMTDVVEHDLRPWEPASGRRTALVAAGLLMALGAVALLIQRGSLLAGATAVVVAVTLT AAAVVLSRAQREAEAGVAVAWMATGYAAVAGLLLVTEDDPFFGLPVAAAGGAVLLTGLAGLVGLGAGRALAIPPVVVGAV FLATGLVMRAAEFDPAAVLTSTLVLVVLAGSVLPWLALAVTGTSVDPMYTVADVTAEPRPIDPARVAADARVAHEILVAV SATVGLLLVVVAPLAVSLGVAGTVLAVLCCLVVMLRTRQYRTGSEVLVGLVSGVVGLLAVAASMLWLHPDWRPTAAVVLA ATGAALLALTMLPAPPSVRRGRLGDLAETVALLGLLPLLVLATGLFDAIRS >Mature_450_residues TQATAGRSGLVRVTVASGARRVDLVLPGAVPVAELVPELARSVGLLDPATVYAGYRLVTAEGRRLAGDAGLVIQGVEDGG LLTVAAGVDDEPPRVYDDVVEAMTDVVEHDLRPWEPASGRRTALVAAGLLMALGAVALLIQRGSLLAGATAVVVAVTLTA AAVVLSRAQREAEAGVAVAWMATGYAAVAGLLLVTEDDPFFGLPVAAAGGAVLLTGLAGLVGLGAGRALAIPPVVVGAVF LATGLVMRAAEFDPAAVLTSTLVLVVLAGSVLPWLALAVTGTSVDPMYTVADVTAEPRPIDPARVAADARVAHEILVAVS ATVGLLLVVVAPLAVSLGVAGTVLAVLCCLVVMLRTRQYRTGSEVLVGLVSGVVGLLAVAASMLWLHPDWRPTAAVVLAA TGAALLALTMLPAPPSVRRGRLGDLAETVALLGLLPLLVLATGLFDAIRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45441; Mature: 45310
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: PS00421 TM4_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQATAGRSGLVRVTVASGARRVDLVLPGAVPVAELVPELARSVGLLDPATVYAGYRLVT CCCCCCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHCEEEEE AEGRRLAGDAGLVIQGVEDGGLLTVAAGVDDEPPRVYDDVVEAMTDVVEHDLRPWEPASG ECCCEECCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC RRTALVAAGLLMALGAVALLIQRGSLLAGATAVVVAVTLTAAAVVLSRAQREAEAGVAVA CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE WMATGYAAVAGLLLVTEDDPFFGLPVAAAGGAVLLTGLAGLVGLGAGRALAIPPVVVGAV HHHHHHHHHHCEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHH FLATGLVMRAAEFDPAAVLTSTLVLVVLAGSVLPWLALAVTGTSVDPMYTVADVTAEPRP HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC IDPARVAADARVAHEILVAVSATVGLLLVVVAPLAVSLGVAGTVLAVLCCLVVMLRTRQY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RTGSEVLVGLVSGVVGLLAVAASMLWLHPDWRPTAAVVLAATGAALLALTMLPAPPSVRR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC GRLGDLAETVALLGLLPLLVLATGLFDAIRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TQATAGRSGLVRVTVASGARRVDLVLPGAVPVAELVPELARSVGLLDPATVYAGYRLVT CCCCCCCCCEEEEEECCCCEEEEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHCEEEEE AEGRRLAGDAGLVIQGVEDGGLLTVAAGVDDEPPRVYDDVVEAMTDVVEHDLRPWEPASG ECCCEECCCCCEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC RRTALVAAGLLMALGAVALLIQRGSLLAGATAVVVAVTLTAAAVVLSRAQREAEAGVAVA CHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE WMATGYAAVAGLLLVTEDDPFFGLPVAAAGGAVLLTGLAGLVGLGAGRALAIPPVVVGAV HHHHHHHHHHCEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCEEECCHHHHHHH FLATGLVMRAAEFDPAAVLTSTLVLVVLAGSVLPWLALAVTGTSVDPMYTVADVTAEPRP HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCC IDPARVAADARVAHEILVAVSATVGLLLVVVAPLAVSLGVAGTVLAVLCCLVVMLRTRQY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC RTGSEVLVGLVSGVVGLLAVAASMLWLHPDWRPTAAVVLAATGAALLALTMLPAPPSVRR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC GRLGDLAETVALLGLLPLLVLATGLFDAIRS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA