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The map label for this gene is eccB4 [H]

Identifier: 119714575

GI number: 119714575

Start: 327960

End: 329408

Strand: Direct

Name: eccB4 [H]

Synonym: Noca_0308

Alternate gene names: 119714575

Gene position: 327960-329408 (Clockwise)

Preceding gene: 119714574

Following gene: 119714576

Centisome position: 6.58

GC content: 77.02

Gene sequence:

>1449_bases
GTGGCCACCAAGAAGGATCTCGTCGAGGCGTACTCGTTCAGCCGGCGCCGGCTCGTCACGGCGTTCGTCTCCGGAGCGCC
GGGCGGCCGCGAGGTCGAGCCGAGCCGCCCGGGGCGCACCATCATCGGCGGCCTGGCGCTCGCCGTGCTGCTGGCGGCCG
GTGCCGCGATCGCGGGCGTCCTCTCCCCGCGGACGCCGGACGACTGGGCCAGCAACGGGCTGATCGTCTCCAAGGAGACC
GGCCAGGCGTACGTCGTCCTCCCGGCCGCGGACGGCTCGGCGCCCGAGCCGGACGCGCCGGTCGAGCTGCGCCCGGTCAT
CAACATCACCTCGGCCAGGCTGATCCTCGGGGCCGACGTCGAGCCGATGCTGATCTCCCAGGACACCATCGACGACCAGC
GGGTCGGTGACGACATCGGCATCCTGGGCGCGCCCGCCAGCCTGCCCGCGCCCGGCCTGCTGGTGGAGACGGGCTGGACC
GCCTGCACGGCCGACGACCGGGGGATGCGGGTCCGGGTGGCCGTCGACCCCGACGTGCTGCCCGCGCCGGACGCCGCCCA
GGTCGTCGAGGTCGGCGGCTCCTTCTACCTGGTCGCCTCCGCGCAGGTCGGCGGTGACGCGGCGGCGGCGTACGCGCTCC
GGCTCCCGGGCGGGGACACCGTCGACAACCTGCTCGGCGCCCTGGACCTGCCGGCGCGGGTGTTCGCGCCGACCGTGCCG
CGCGGGTGGCTCGACCTGTTCCCGGCGGGCGCCGCGCTCGGCTGGGAGAGTTTCGGGCTGGCCGGCGTGGGCGGGCGACC
GGACGGCTGGGACGCGGCCCAGGTGCCGGGCCGCGCCCGGGTGGGCGACGTCCTCCGGGACGCCACCGGCGACGCCGTGG
TGCTGACCGCGGACGGGCCGGCCGAGCTCGACCCCTTCGCGCTCGCCGTCTACAGCAACACCCCCATCCCCGGCGGTGGC
ACCCCGCGGGTGCTCCCGGTCGACCGGTTCCCCGACCTGGCCAGGACCCGCCTGCCCGGCCCGGACCGGCACTGGCCGAC
CACGACGGTCGAGCCCACGGAGACCGACCCCTGCGCGGTGCTGACCACGGCAGGCGAGGAGCCGGCGGTCGTGCAGCTCG
CGCAGCGCCCGGGACCTGGCTACGACGCACGCGACGTCGTGCCCGGCCACGCCGACGTGACCGTCGACCCGGGCCGGGGC
GCCTACGTGCGGTCCGCGAGCCCGGAGGGCGCCCGCGCCCCGCAGCCCGTGGCGATCGATGCCAAGGGACGGGCCAACCC
GCTCGACGGCGACGAGACCGCAGGCCTGCTCGGCTACGCCGACTTCCCCGCACCGGTGGTCCCGGACACCTGGGTGAAGC
TGTTCGGCGCCGGCGTACCGCTCTCGCAGAACCTCGCGCTCTGCCCGCCCGCCGCGGCCGGCGCCCAGGACGGCCCGTCG
TGCGCGTGA

Upstream 100 bases:

>100_bases
CTCGGCGACCTCGCCGAGACCGTCGCGCTGCTGGGCCTGCTGCCGCTGCTCGTCCTCGCGACGGGCCTGTTCGACGCCAT
CCGGTCCTGAGGCCACGACC

Downstream 100 bases:

>100_bases
CCGCGGCCGCCGTCGGCACGGCCGTCGTGGTCGCGGTGCTCGGCTCCGCCCCGGCCGCCCCGGCCGCCCCGGCCGCCGCG
GCCGCGGTTCCACCGTCGTG

Product: hypothetical protein

Products: NA

Alternate protein names: ESX conserved component B4; Type VII secretion system protein eccB4; T7SS protein eccB4 [H]

Number of amino acids: Translated: 482; Mature: 481

Protein sequence:

>482_residues
MATKKDLVEAYSFSRRRLVTAFVSGAPGGREVEPSRPGRTIIGGLALAVLLAAGAAIAGVLSPRTPDDWASNGLIVSKET
GQAYVVLPAADGSAPEPDAPVELRPVINITSARLILGADVEPMLISQDTIDDQRVGDDIGILGAPASLPAPGLLVETGWT
ACTADDRGMRVRVAVDPDVLPAPDAAQVVEVGGSFYLVASAQVGGDAAAAYALRLPGGDTVDNLLGALDLPARVFAPTVP
RGWLDLFPAGAALGWESFGLAGVGGRPDGWDAAQVPGRARVGDVLRDATGDAVVLTADGPAELDPFALAVYSNTPIPGGG
TPRVLPVDRFPDLARTRLPGPDRHWPTTTVEPTETDPCAVLTTAGEEPAVVQLAQRPGPGYDARDVVPGHADVTVDPGRG
AYVRSASPEGARAPQPVAIDAKGRANPLDGDETAGLLGYADFPAPVVPDTWVKLFGAGVPLSQNLALCPPAAAGAQDGPS
CA

Sequences:

>Translated_482_residues
MATKKDLVEAYSFSRRRLVTAFVSGAPGGREVEPSRPGRTIIGGLALAVLLAAGAAIAGVLSPRTPDDWASNGLIVSKET
GQAYVVLPAADGSAPEPDAPVELRPVINITSARLILGADVEPMLISQDTIDDQRVGDDIGILGAPASLPAPGLLVETGWT
ACTADDRGMRVRVAVDPDVLPAPDAAQVVEVGGSFYLVASAQVGGDAAAAYALRLPGGDTVDNLLGALDLPARVFAPTVP
RGWLDLFPAGAALGWESFGLAGVGGRPDGWDAAQVPGRARVGDVLRDATGDAVVLTADGPAELDPFALAVYSNTPIPGGG
TPRVLPVDRFPDLARTRLPGPDRHWPTTTVEPTETDPCAVLTTAGEEPAVVQLAQRPGPGYDARDVVPGHADVTVDPGRG
AYVRSASPEGARAPQPVAIDAKGRANPLDGDETAGLLGYADFPAPVVPDTWVKLFGAGVPLSQNLALCPPAAAGAQDGPS
CA
>Mature_481_residues
ATKKDLVEAYSFSRRRLVTAFVSGAPGGREVEPSRPGRTIIGGLALAVLLAAGAAIAGVLSPRTPDDWASNGLIVSKETG
QAYVVLPAADGSAPEPDAPVELRPVINITSARLILGADVEPMLISQDTIDDQRVGDDIGILGAPASLPAPGLLVETGWTA
CTADDRGMRVRVAVDPDVLPAPDAAQVVEVGGSFYLVASAQVGGDAAAAYALRLPGGDTVDNLLGALDLPARVFAPTVPR
GWLDLFPAGAALGWESFGLAGVGGRPDGWDAAQVPGRARVGDVLRDATGDAVVLTADGPAELDPFALAVYSNTPIPGGGT
PRVLPVDRFPDLARTRLPGPDRHWPTTTVEPTETDPCAVLTTAGEEPAVVQLAQRPGPGYDARDVVPGHADVTVDPGRGA
YVRSASPEGARAPQPVAIDAKGRANPLDGDETAGLLGYADFPAPVVPDTWVKLFGAGVPLSQNLALCPPAAAGAQDGPSC
A

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eccB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007795 [H]

Pfam domain/function: PF05108 DUF690 [H]

EC number: NA

Molecular weight: Translated: 49166; Mature: 49035

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKKDLVEAYSFSRRRLVTAFVSGAPGGREVEPSRPGRTIIGGLALAVLLAAGAAIAGV
CCCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LSPRTPDDWASNGLIVSKETGQAYVVLPAADGSAPEPDAPVELRPVINITSARLILGADV
CCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCEEEEEECCC
EPMLISQDTIDDQRVGDDIGILGAPASLPAPGLLVETGWTACTADDRGMRVRVAVDPDVL
CCEEEECCCCCHHHCCCCCEEEECCCCCCCCCEEEECCCEEECCCCCCCEEEEEECCCCC
PAPDAAQVVEVGGSFYLVASAQVGGDAAAAYALRLPGGDTVDNLLGALDLPARVFAPTVP
CCCCHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHCCCCC
RGWLDLFPAGAALGWESFGLAGVGGRPDGWDAAQVPGRARVGDVLRDATGDAVVLTADGP
CCHHHHCCCCCCCCHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHCCCCCEEEEECCCC
AELDPFALAVYSNTPIPGGGTPRVLPVDRFPDLARTRLPGPDRHWPTTTVEPTETDPCAV
CCCCCEEEEEEECCCCCCCCCCCEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
LTTAGEEPAVVQLAQRPGPGYDARDVVPGHADVTVDPGRGAYVRSASPEGARAPQPVAID
EEECCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCEEEE
AKGRANPLDGDETAGLLGYADFPAPVVPDTWVKLFGAGVPLSQNLALCPPAAAGAQDGPS
CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC
CA
CC
>Mature Secondary Structure 
ATKKDLVEAYSFSRRRLVTAFVSGAPGGREVEPSRPGRTIIGGLALAVLLAAGAAIAGV
CCHHHHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
LSPRTPDDWASNGLIVSKETGQAYVVLPAADGSAPEPDAPVELRPVINITSARLILGADV
CCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCEEEEEECCC
EPMLISQDTIDDQRVGDDIGILGAPASLPAPGLLVETGWTACTADDRGMRVRVAVDPDVL
CCEEEECCCCCHHHCCCCCEEEECCCCCCCCCEEEECCCEEECCCCCCCEEEEEECCCCC
PAPDAAQVVEVGGSFYLVASAQVGGDAAAAYALRLPGGDTVDNLLGALDLPARVFAPTVP
CCCCHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHCCCHHHHCCCCC
RGWLDLFPAGAALGWESFGLAGVGGRPDGWDAAQVPGRARVGDVLRDATGDAVVLTADGP
CCHHHHCCCCCCCCHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHCCCCCEEEEECCCC
AELDPFALAVYSNTPIPGGGTPRVLPVDRFPDLARTRLPGPDRHWPTTTVEPTETDPCAV
CCCCCEEEEEEECCCCCCCCCCCEEECCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCEEE
LTTAGEEPAVVQLAQRPGPGYDARDVVPGHADVTVDPGRGAYVRSASPEGARAPQPVAID
EEECCCCCCEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCEEECCCCCCCCCCCCEEEE
AKGRANPLDGDETAGLLGYADFPAPVVPDTWVKLFGAGVPLSQNLALCPPAAAGAQDGPS
CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCC
CA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]