| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714566
Identifier: 119714566
GI number: 119714566
Start: 318446
End: 318946
Strand: Reverse
Name: 119714566
Synonym: Noca_0299
Alternate gene names: NA
Gene position: 318946-318446 (Counterclockwise)
Preceding gene: 119714567
Following gene: 119714563
Centisome position: 6.4
GC content: 73.65
Gene sequence:
>501_bases ATGCCCCAGGGCGCGCGGTCGGCGATCACGATCTCGGCGCTCGGCCTGCTCCTCGTGGTGGCCGCCCTCTGGGGCTGGTC CGCGGCCACGGACCCGCTCCCGGCCAAGGTCGACACGCCGATCTGCGTGGACCGCACGGTCGCGGCCGGCACCAAGGTGT TCGCCCAGGACGTCACCGTCAGCGTCTACAACGCCGGCACCCGGGAGGGCCTGGCCGGGCGCACCATGCAGCTGCTCACC GACGACGGGTTCGCCGAGGGCAACAGCGGCAACGTCAGCGCCCGGGTCGAGGTGGTCCAGATCTGGACCCTCGACCCGAC GAACCCGGCCGTCCAGCTCGTGGCGAGCCGACTCGGCCCGGACGTCGAGATCGAACGCCGCGACGGCCCCGGCGCCGGCA TCTCGATCGTGGTCGGCGACGGCTTCCAGGACCTGGTCGAGGGCCGCCGCTCGGTGCAGGCCGAGGACGACGCCACGATC TGCAGCCCGCCGGTCGGCTGA
Upstream 100 bases:
>100_bases GCGGCGACCTCTACCTCGAGGACGGGCTGCACCGCGCGCTGCGCGCCGCCCTCCAGCAGCGCAACGTCCTGCACGCCCGG GTCCACACCCTGGAGGACTG
Downstream 100 bases:
>100_bases GGGGCGCCCAGGCCCCCCGATGCTCAGGGCTGGGGCCGGCGGGCGGGCTTCTCGACCAGCCACTGGGCGAGCCGGCCGCG CGCACTGACCTGGCGCAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MPQGARSAITISALGLLLVVAALWGWSAATDPLPAKVDTPICVDRTVAAGTKVFAQDVTVSVYNAGTREGLAGRTMQLLT DDGFAEGNSGNVSARVEVVQIWTLDPTNPAVQLVASRLGPDVEIERRDGPGAGISIVVGDGFQDLVEGRRSVQAEDDATI CSPPVG
Sequences:
>Translated_166_residues MPQGARSAITISALGLLLVVAALWGWSAATDPLPAKVDTPICVDRTVAAGTKVFAQDVTVSVYNAGTREGLAGRTMQLLT DDGFAEGNSGNVSARVEVVQIWTLDPTNPAVQLVASRLGPDVEIERRDGPGAGISIVVGDGFQDLVEGRRSVQAEDDATI CSPPVG >Mature_165_residues PQGARSAITISALGLLLVVAALWGWSAATDPLPAKVDTPICVDRTVAAGTKVFAQDVTVSVYNAGTREGLAGRTMQLLTD DGFAEGNSGNVSARVEVVQIWTLDPTNPAVQLVASRLGPDVEIERRDGPGAGISIVVGDGFQDLVEGRRSVQAEDDATIC SPPVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17184; Mature: 17052
Theoretical pI: Translated: 4.17; Mature: 4.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPQGARSAITISALGLLLVVAALWGWSAATDPLPAKVDTPICVDRTVAAGTKVFAQDVTV CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHCCCEEECCCEEE SVYNAGTREGLAGRTMQLLTDDGFAEGNSGNVSARVEVVQIWTLDPTNPAVQLVASRLGP EEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHCCC DVEIERRDGPGAGISIVVGDGFQDLVEGRRSVQAEDDATICSPPVG CEEEEECCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCEECCCCCC >Mature Secondary Structure PQGARSAITISALGLLLVVAALWGWSAATDPLPAKVDTPICVDRTVAAGTKVFAQDVTV CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCHHHCCCEEECCCEEE SVYNAGTREGLAGRTMQLLTDDGFAEGNSGNVSARVEVVQIWTLDPTNPAVQLVASRLGP EEECCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEEEEEEEECCCCHHHHHHHHHCCC DVEIERRDGPGAGISIVVGDGFQDLVEGRRSVQAEDDATICSPPVG CEEEEECCCCCCCEEEEECCCHHHHHHHHHCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA