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The map label for this gene is ifcA [H]

Identifier: 119714563

GI number: 119714563

Start: 314330

End: 315811

Strand: Reverse

Name: ifcA [H]

Synonym: Noca_0296

Alternate gene names: 119714563

Gene position: 315811-314330 (Counterclockwise)

Preceding gene: 119714566

Following gene: 119714562

Centisome position: 6.33

GC content: 72.13

Gene sequence:

>1482_bases
ATGGGCAGAGGCACCGACATCCCCGCCGTCCTCCCGGCCGAGCTGCTGGCCGACGCGCCGTCGTACGACGTCGTGGTCGT
CGGGTTCGGCATCGCCGGTGGCTGCGCCGCGCTCGAGGCCGCGCGTGCGGGGGCGCGGGTGCTGCTCCTGGAGCGCGCGG
CGGTGCACGGCGGCACCTCCAGCCTGTCCGGCGGCCACTTCTACCTCGGCGGCGGGACGGCCGTGCAGGTGGCGACCGGA
CACGATGACACCCCCGAGGAGATGTACAAGTACCTCGTCGCCGTCTCGAAGGAGCCCGAGCACGACAAGATCCGCGCCTA
CTGCGAGGGCTCGGTCGAGCACTTCGACTGGCTCGAGGCGCTGGGCTTCGAGTTCGAGCGCACCTACTACCCCGAGAAGG
CGGTGATCCAGCCGGGGACCGAGGGGCTGATGTACACGGGCAACGAGAAGGTGTGGCCCTACCGGGAGCAGGCGCGGCCG
GCGCCGCGCGGCCACAAGGTGCCGGTGCCCGGGGACACCGAGGGCACCAGGATGGTGATGGACCTGCTGCACGAGCGGGT
CGAGGAGGCGGGCGTCGAGGTCCGCTACGAGACCGGCGCGACCAACCTGGTCGCCGACGGGTCCGGCACCGTCCGCGGGC
TGGCCTGGAGGTCCTTCGAGGAGACCGGGTACGTCGCCGCCGCCGGGGTCGTGATCGCGGCCGGCGGCTTCGTGATGAAC
CCGGACATGGTCGCCGCGCACACCCCGCGGCTGGCGGAGAAGCCGTTCACGCTGGGGTCGACGTACGACGACGGCCTCGG
CATCCGGCTCGGCGCGTCGGCCGGCGCGGAGCTCAAGCACATGGACGAGCCGTTCATCACCGCGCCGTTCTACCCACCGT
CGGCGCTGGTCACCGGCTTCCTCGTGAACAAGCTCGGCGAGCGGTTCTGCGCCGAGGACTCCTACCACTCGCGCACCTCG
CAGTTCGTGATGGAGCAGCCCGACTCCACGGCGTACCTCATCGTCGACAGCGAGCACGTGGAGTACCCGAAGTTCCCGCT
GGTGCCGCTGATCGACGGCTTCGAGACGATCTCCGAGCTCGAGGACGCGCTCGAGCTGCCGGCCGGGTCGGTCGCCAAGA
CGCTGGAGCGCTACAACGAGCTCGCCGAGGCCGGGGAGGACGCCGACTTCCACAAGGCGCCCGAGTGGCTGGCGCCGCAG
GGCGCCGGCCCGTGGGCGGTCTTCGACCTGCGGCTGGGCCACGCGATGTACGCCGGCTTCACCCTGGGTGGGCTGCGGGT
GAGCGTGGACGGCGAGGTCGAGCGCCCCGACGGCTCGGTGATCCCCGGCCTCTACGCCGCCGGCGCCTGCGCGTCCAACA
TCGCCCAGGACGGCAAGGGCTACTGCTCGGGCACCCAGCTCGGTGAGGGGTCGTTCTTCGGCCGCCGGAGCGGGCGAGCC
GCCGCTGCCAGTGCGAGCGCAGCGAGCACGGGCAGCGGATAG

Upstream 100 bases:

>100_bases
GAGGCCGCCGGCGAGCTGGTGCTCCTGGCCGTCGGCGTCGATCAGGGTCAGCACGTCGGACAGGATCGCACGGAATTGGA
ACTTGTTCTAGATTTGTGCC

Downstream 100 bases:

>100_bases
CGGCGCAGCTCGAGGAGCGTCGGCTCGGGCCGGAGCGCGGGCGCGGCGGTTTCCCCGGTTCACCGGGGAAGTCGGAACTT
CTGGCCCGAAGTTTCGGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: Fe(3+)-induced flavocytochrome C3; Ifc3; Iron(III)-induced flavocytochrome C3 [H]

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MGRGTDIPAVLPAELLADAPSYDVVVVGFGIAGGCAALEAARAGARVLLLERAAVHGGTSSLSGGHFYLGGGTAVQVATG
HDDTPEEMYKYLVAVSKEPEHDKIRAYCEGSVEHFDWLEALGFEFERTYYPEKAVIQPGTEGLMYTGNEKVWPYREQARP
APRGHKVPVPGDTEGTRMVMDLLHERVEEAGVEVRYETGATNLVADGSGTVRGLAWRSFEETGYVAAAGVVIAAGGFVMN
PDMVAAHTPRLAEKPFTLGSTYDDGLGIRLGASAGAELKHMDEPFITAPFYPPSALVTGFLVNKLGERFCAEDSYHSRTS
QFVMEQPDSTAYLIVDSEHVEYPKFPLVPLIDGFETISELEDALELPAGSVAKTLERYNELAEAGEDADFHKAPEWLAPQ
GAGPWAVFDLRLGHAMYAGFTLGGLRVSVDGEVERPDGSVIPGLYAAGACASNIAQDGKGYCSGTQLGEGSFFGRRSGRA
AAASASAASTGSG

Sequences:

>Translated_493_residues
MGRGTDIPAVLPAELLADAPSYDVVVVGFGIAGGCAALEAARAGARVLLLERAAVHGGTSSLSGGHFYLGGGTAVQVATG
HDDTPEEMYKYLVAVSKEPEHDKIRAYCEGSVEHFDWLEALGFEFERTYYPEKAVIQPGTEGLMYTGNEKVWPYREQARP
APRGHKVPVPGDTEGTRMVMDLLHERVEEAGVEVRYETGATNLVADGSGTVRGLAWRSFEETGYVAAAGVVIAAGGFVMN
PDMVAAHTPRLAEKPFTLGSTYDDGLGIRLGASAGAELKHMDEPFITAPFYPPSALVTGFLVNKLGERFCAEDSYHSRTS
QFVMEQPDSTAYLIVDSEHVEYPKFPLVPLIDGFETISELEDALELPAGSVAKTLERYNELAEAGEDADFHKAPEWLAPQ
GAGPWAVFDLRLGHAMYAGFTLGGLRVSVDGEVERPDGSVIPGLYAAGACASNIAQDGKGYCSGTQLGEGSFFGRRSGRA
AAASASAASTGSG
>Mature_492_residues
GRGTDIPAVLPAELLADAPSYDVVVVGFGIAGGCAALEAARAGARVLLLERAAVHGGTSSLSGGHFYLGGGTAVQVATGH
DDTPEEMYKYLVAVSKEPEHDKIRAYCEGSVEHFDWLEALGFEFERTYYPEKAVIQPGTEGLMYTGNEKVWPYREQARPA
PRGHKVPVPGDTEGTRMVMDLLHERVEEAGVEVRYETGATNLVADGSGTVRGLAWRSFEETGYVAAAGVVIAAGGFVMNP
DMVAAHTPRLAEKPFTLGSTYDDGLGIRLGASAGAELKHMDEPFITAPFYPPSALVTGFLVNKLGERFCAEDSYHSRTSQ
FVMEQPDSTAYLIVDSEHVEYPKFPLVPLIDGFETISELEDALELPAGSVAKTLERYNELAEAGEDADFHKAPEWLAPQG
AGPWAVFDLRLGHAMYAGFTLGGLRVSVDGEVERPDGSVIPGLYAAGACASNIAQDGKGYCSGTQLGEGSFFGRRSGRAA
AASASAASTGSG

Specific function: Catalyzes unidirectional fumarate reduction using artificial electron donors such as methyl viologen. The physiological reductant is unknown [H]

COG id: COG1053

COG function: function code C; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cytochrome c domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003953
- InterPro:   IPR013027
- InterPro:   IPR010960
- InterPro:   IPR011031 [H]

Pfam domain/function: PF00890 FAD_binding_2 [H]

EC number: =1.3.99.1 [H]

Molecular weight: Translated: 52269; Mature: 52138

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRGTDIPAVLPAELLADAPSYDVVVVGFGIAGGCAALEAARAGARVLLLERAAVHGGTS
CCCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEHHHHCCCCC
SLSGGHFYLGGGTAVQVATGHDDTPEEMYKYLVAVSKEPEHDKIRAYCEGSVEHFDWLEA
CCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHH
LGFEFERTYYPEKAVIQPGTEGLMYTGNEKVWPYREQARPAPRGHKVPVPGDTEGTRMVM
HCCCHHHEECCCCCEECCCCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHH
DLLHERVEEAGVEVRYETGATNLVADGSGTVRGLAWRSFEETGYVAAAGVVIAAGGFVMN
HHHHHHHHHCCCEEEEECCCCEEEECCCCCEEEEEECCHHHCCCEEECCEEEECCCEEEC
PDMVAAHTPRLAEKPFTLGSTYDDGLGIRLGASAGAELKHMDEPFITAPFYPPSALVTGF
CCEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCEECCCCCHHHHHHHH
LVNKLGERFCAEDSYHSRTSQFVMEQPDSTAYLIVDSEHVEYPKFPLVPLIDGFETISEL
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
EDALELPAGSVAKTLERYNELAEAGEDADFHKAPEWLAPQGAGPWAVFDLRLGHAMYAGF
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCEEEEEEECCHHHHHCE
TLGGLRVSVDGEVERPDGSVIPGLYAAGACASNIAQDGKGYCSGTQLGEGSFFGRRSGRA
EECCEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
AAASASAASTGSG
HHCCCCCCCCCCC
>Mature Secondary Structure 
GRGTDIPAVLPAELLADAPSYDVVVVGFGIAGGCAALEAARAGARVLLLERAAVHGGTS
CCCCCCCCCCCHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEHHHHCCCCC
SLSGGHFYLGGGTAVQVATGHDDTPEEMYKYLVAVSKEPEHDKIRAYCEGSVEHFDWLEA
CCCCCEEEECCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHHEECCCCHHHHHHHH
LGFEFERTYYPEKAVIQPGTEGLMYTGNEKVWPYREQARPAPRGHKVPVPGDTEGTRMVM
HCCCHHHEECCCCCEECCCCCCEEEECCCCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHH
DLLHERVEEAGVEVRYETGATNLVADGSGTVRGLAWRSFEETGYVAAAGVVIAAGGFVMN
HHHHHHHHHCCCEEEEECCCCEEEECCCCCEEEEEECCHHHCCCEEECCEEEECCCEEEC
PDMVAAHTPRLAEKPFTLGSTYDDGLGIRLGASAGAELKHMDEPFITAPFYPPSALVTGF
CCEEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCHHHCCCCCEECCCCCHHHHHHHH
LVNKLGERFCAEDSYHSRTSQFVMEQPDSTAYLIVDSEHVEYPKFPLVPLIDGFETISEL
HHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHH
EDALELPAGSVAKTLERYNELAEAGEDADFHKAPEWLAPQGAGPWAVFDLRLGHAMYAGF
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCEEEEEEECCHHHHHCE
TLGGLRVSVDGEVERPDGSVIPGLYAAGACASNIAQDGKGYCSGTQLGEGSFFGRRSGRA
EECCEEEEECCCEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
AAASASAASTGSG
HHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10455032; 10581549 [H]