| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714530
Identifier: 119714530
GI number: 119714530
Start: 282485
End: 282982
Strand: Direct
Name: 119714530
Synonym: Noca_0263
Alternate gene names: NA
Gene position: 282485-282982 (Clockwise)
Preceding gene: 119714528
Following gene: 119714531
Centisome position: 5.67
GC content: 74.3
Gene sequence:
>498_bases ATGGCGGCGTACGGCGACCGCCTGCTGATCGGCGCCGGGTCCGACGGAGGCCGGCTCACCGTGTTCGAGAAGGTGGGGGA CGGGCCGTTCCGGGTGTTGGCCCGCAGCAGGGCGGTCCACGACTTCGACGTCGCGTACAGCGGACGGGAGCCGGTCCTGG CCTGGTCCCGCGGCCGGCTGCGCCAGCTCAGCCTGGTCGTCGGCGGCCGGCTCGTGAACACCCGGACGCCGACCGAGGCG GTCGCGCTGGCGACCGACGGTCGGCTGGTGCACGTGGTGTTCTCGACGGTGGCACGGACGACGTGCGGCCCGGCCGGCTG CCTCCACAGCGGCGTCTACCACGTCGGCCTGCGCGGCCGGCGGGTCGCGATCAAGGCCAGCCTGGTCCAGGCCGGCTCCT CCTCGCCGTTCCGCCTCGCGGCCGACACCTCCGGCCGGACCTTGGGGGTGGTGGTCTCGCGCAACGGGGTGACCAGGCTG TACCAGCGCAGCTTCTGA
Upstream 100 bases:
>100_bases TGCCGGTCACGGCAGGGGACCACGTCGCGCTGCAGGTCGACGGTGCCTTCGCCTGCTCGCGCCCAGCGTTCCTCGCCGTT GCCGGCACCGACGGATCCGG
Downstream 100 bases:
>100_bases GCCGCGGATCCGCTGGGCGTCCCCGGCGGACGCGGTTGGGTGATCCTGCGACGATGGGGCCATGGGGACCCCCGCTGACG ACTGGTTCGGCCAGGCCTTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MAAYGDRLLIGAGSDGGRLTVFEKVGDGPFRVLARSRAVHDFDVAYSGREPVLAWSRGRLRQLSLVVGGRLVNTRTPTEA VALATDGRLVHVVFSTVARTTCGPAGCLHSGVYHVGLRGRRVAIKASLVQAGSSSPFRLAADTSGRTLGVVVSRNGVTRL YQRSF
Sequences:
>Translated_165_residues MAAYGDRLLIGAGSDGGRLTVFEKVGDGPFRVLARSRAVHDFDVAYSGREPVLAWSRGRLRQLSLVVGGRLVNTRTPTEA VALATDGRLVHVVFSTVARTTCGPAGCLHSGVYHVGLRGRRVAIKASLVQAGSSSPFRLAADTSGRTLGVVVSRNGVTRL YQRSF >Mature_164_residues AAYGDRLLIGAGSDGGRLTVFEKVGDGPFRVLARSRAVHDFDVAYSGREPVLAWSRGRLRQLSLVVGGRLVNTRTPTEAV ALATDGRLVHVVFSTVARTTCGPAGCLHSGVYHVGLRGRRVAIKASLVQAGSSSPFRLAADTSGRTLGVVVSRNGVTRLY QRSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17522; Mature: 17391
Theoretical pI: Translated: 11.90; Mature: 11.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAYGDRLLIGAGSDGGRLTVFEKVGDGPFRVLARSRAVHDFDVAYSGREPVLAWSRGRL CCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCEEEECCCCC RQLSLVVGGRLVNTRTPTEAVALATDGRLVHVVFSTVARTTCGPAGCLHSGVYHVGLRGR EEEEEEECCEEEECCCCCCEEEEECCCCEEEHHHHHHHHHCCCCHHHHHCCEEEECCCCC RVAIKASLVQAGSSSPFRLAADTSGRTLGVVVSRNGVTRLYQRSF EEEEEEEEECCCCCCCEEEEECCCCCEEEEEEECCCHHHHHHCCC >Mature Secondary Structure AAYGDRLLIGAGSDGGRLTVFEKVGDGPFRVLARSRAVHDFDVAYSGREPVLAWSRGRL CCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHHCCCEEEEEEECCCCCEEEECCCCC RQLSLVVGGRLVNTRTPTEAVALATDGRLVHVVFSTVARTTCGPAGCLHSGVYHVGLRGR EEEEEEECCEEEECCCCCCEEEEECCCCEEEHHHHHHHHHCCCCHHHHHCCEEEECCCCC RVAIKASLVQAGSSSPFRLAADTSGRTLGVVVSRNGVTRLYQRSF EEEEEEEEECCCCCCCEEEEECCCCCEEEEEEECCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA