| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714531
Identifier: 119714531
GI number: 119714531
Start: 283044
End: 284195
Strand: Direct
Name: 119714531
Synonym: Noca_0264
Alternate gene names: NA
Gene position: 283044-284195 (Clockwise)
Preceding gene: 119714530
Following gene: 119714532
Centisome position: 5.68
GC content: 72.57
Gene sequence:
>1152_bases ATGGGGACCCCCGCTGACGACTGGTTCGGCCAGGCCTTCTCGAAGGCGTGGCGGGACAAGGCCGAGGAGATCGGGCGCTT CAACCTGGCCATCTTCGGCAAGACCGGTGTCGGGAAGAGCACCCTGGTCAACGCGATCTTCGGCAGCGAGATCGCGGCGA CCGGGATCGGCGAGCCGGTCACCCGGGCCGAGCACCTGTACCTCCACCAGAGCGGCACCCTCGGCGTCCTCGACACCCGT GGGCTCGAGGTGGGACGCGACAACGACGCGCTGATCGCCGAGCTCAAGGACTACCTCCACGGCATGCGTCGCAGGCCCCT GGCCGACCAGCTGCACGTCGCCTGGTACTGCGTGCGCGCCGGCGACCGGCGCTTCGAGGCGACCGAGGCCGAGTTCGTCC GCGCCCTGCACGAGCTCGGGCTGCCGGTGATCCTGGTGCTCACCCAGGTCCCGCGCAGCATCGGGCCCGGCGGGGACGCG CGGGTGCACCCCGACGCCGAGGCGCTCGCGGCGAGCATCGCCGAGCTGCGGCTGCCGATCGTCGACGGGCTGATCCACTA CACGATGGCCCTCGAGGACGACTTCACCGGCCAGGCGGCGTACGGCCTGCAGGAGCTCCTCGATGCCACCTTTCGCGGCG CGCCGGAAGGCGTCGCCCACGCCATCACCGCCGCCCAGCGGATCGACTTCGTCCGCAAGCGCGAGCGCGCCGAGAAGGCG ATCAAGGCGGCGACCGGCGCCGCCACCACCGCCGGAGCCTCCCCCATCCCCTTCTCCGACGCGGCCATCCTGGTTCCGCT CCAGATCGGGATGATGGCCTCGATCGCCGTCACGTACGGCGTCCCCCTGGAGCGCTCCACCGCCGCGTCGCTGGCCGCCA CCGCCGCCGCGACCACGGCCGGCCGGTCGCTGGTGACGAACCTGGTCAAGTTCGTGCCGGGTGCGGGCACCATGGTCGCC GCCCCGATCAGCGCGACCGTGGCCGGCACGTTCACCTACGCGATGGGCCAGGCCTGGCTCCGGGTGTGCGAGCGGCTCGC CCGCGGCGAGCTCGGGGTGGTCGGCGGCGCGCTGGACGGTGAGTCGGTGCGCAAGGTCTTCCTCGAGGAGTTCAAGACTC AGGCGGCCCGGCGCAGGGTCGGGCGCCGATGA
Upstream 100 bases:
>100_bases CGCAACGGGGTGACCAGGCTGTACCAGCGCAGCTTCTGAGCCGCGGATCCGCTGGGCGTCCCCGGCGGACGCGGTTGGGT GATCCTGCGACGATGGGGCC
Downstream 100 bases:
>100_bases CGCGCAGGGACGCGACGGGGTGGTCGTGAGGATCGTCGTCCTGACCGGGGCCGGGATCTCCGCCGAGAGCGGGCTCCCGA CGTTCCGTGACGCCGACGGA
Product: GTP-binding protein
Products: NA
Alternate protein names: GTPase; GTPase Protein; GTPase Family
Number of amino acids: Translated: 383; Mature: 382
Protein sequence:
>383_residues MGTPADDWFGQAFSKAWRDKAEEIGRFNLAIFGKTGVGKSTLVNAIFGSEIAATGIGEPVTRAEHLYLHQSGTLGVLDTR GLEVGRDNDALIAELKDYLHGMRRRPLADQLHVAWYCVRAGDRRFEATEAEFVRALHELGLPVILVLTQVPRSIGPGGDA RVHPDAEALAASIAELRLPIVDGLIHYTMALEDDFTGQAAYGLQELLDATFRGAPEGVAHAITAAQRIDFVRKRERAEKA IKAATGAATTAGASPIPFSDAAILVPLQIGMMASIAVTYGVPLERSTAASLAATAAATTAGRSLVTNLVKFVPGAGTMVA APISATVAGTFTYAMGQAWLRVCERLARGELGVVGGALDGESVRKVFLEEFKTQAARRRVGRR
Sequences:
>Translated_383_residues MGTPADDWFGQAFSKAWRDKAEEIGRFNLAIFGKTGVGKSTLVNAIFGSEIAATGIGEPVTRAEHLYLHQSGTLGVLDTR GLEVGRDNDALIAELKDYLHGMRRRPLADQLHVAWYCVRAGDRRFEATEAEFVRALHELGLPVILVLTQVPRSIGPGGDA RVHPDAEALAASIAELRLPIVDGLIHYTMALEDDFTGQAAYGLQELLDATFRGAPEGVAHAITAAQRIDFVRKRERAEKA IKAATGAATTAGASPIPFSDAAILVPLQIGMMASIAVTYGVPLERSTAASLAATAAATTAGRSLVTNLVKFVPGAGTMVA APISATVAGTFTYAMGQAWLRVCERLARGELGVVGGALDGESVRKVFLEEFKTQAARRRVGRR >Mature_382_residues GTPADDWFGQAFSKAWRDKAEEIGRFNLAIFGKTGVGKSTLVNAIFGSEIAATGIGEPVTRAEHLYLHQSGTLGVLDTRG LEVGRDNDALIAELKDYLHGMRRRPLADQLHVAWYCVRAGDRRFEATEAEFVRALHELGLPVILVLTQVPRSIGPGGDAR VHPDAEALAASIAELRLPIVDGLIHYTMALEDDFTGQAAYGLQELLDATFRGAPEGVAHAITAAQRIDFVRKRERAEKAI KAATGAATTAGASPIPFSDAAILVPLQIGMMASIAVTYGVPLERSTAASLAATAAATTAGRSLVTNLVKFVPGAGTMVAA PISATVAGTFTYAMGQAWLRVCERLARGELGVVGGALDGESVRKVFLEEFKTQAARRRVGRR
Specific function: Unknown
COG id: COG3597
COG function: function code S; Uncharacterized protein/domain associated with GTPases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40702; Mature: 40571
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGTPADDWFGQAFSKAWRDKAEEIGRFNLAIFGKTGVGKSTLVNAIFGSEIAATGIGEPV CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCHHHHCCCCCCH TRAEHLYLHQSGTLGVLDTRGLEVGRDNDALIAELKDYLHGMRRRPLADQLHVAWYCVRA HHHHHEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEC GDRRFEATEAEFVRALHELGLPVILVLTQVPRSIGPGGDARVHPDAEALAASIAELRLPI CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH VDGLIHYTMALEDDFTGQAAYGLQELLDATFRGAPEGVAHAITAAQRIDFVRKRERAEKA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IKAATGAATTAGASPIPFSDAAILVPLQIGMMASIAVTYGVPLERSTAASLAATAAATTA HHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH GRSLVTNLVKFVPGAGTMVAAPISATVAGTFTYAMGQAWLRVCERLARGELGVVGGALDG HHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCH ESVRKVFLEEFKTQAARRRVGRR HHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure GTPADDWFGQAFSKAWRDKAEEIGRFNLAIFGKTGVGKSTLVNAIFGSEIAATGIGEPV CCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHCCHHHHCCCCCCH TRAEHLYLHQSGTLGVLDTRGLEVGRDNDALIAELKDYLHGMRRRPLADQLHVAWYCVRA HHHHHEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHEEEEC GDRRFEATEAEFVRALHELGLPVILVLTQVPRSIGPGGDARVHPDAEALAASIAELRLPI CCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH VDGLIHYTMALEDDFTGQAAYGLQELLDATFRGAPEGVAHAITAAQRIDFVRKRERAEKA HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH IKAATGAATTAGASPIPFSDAAILVPLQIGMMASIAVTYGVPLERSTAASLAATAAATTA HHHHCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH GRSLVTNLVKFVPGAGTMVAAPISATVAGTFTYAMGQAWLRVCERLARGELGVVGGALDG HHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCH ESVRKVFLEEFKTQAARRRVGRR HHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA