Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

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The map label for this gene is 119714523

Identifier: 119714523

GI number: 119714523

Start: 274119

End: 275576

Strand: Reverse

Name: 119714523

Synonym: Noca_0256

Alternate gene names: NA

Gene position: 275576-274119 (Counterclockwise)

Preceding gene: 119714524

Following gene: 119714522

Centisome position: 5.53

GC content: 74.55

Gene sequence:

>1458_bases
ATGCGCGCGCTGACCGCCACCCTGTCCCTGCTGCTCGCGGGTGCGCTCGCCGCCCCGGCGGCGGCCGACCCCGCGCCCAC
CGACCCGGCGTACACCCAGCGCGACGCGCAGAACATCACCGACGCCTACGGCCGGATCGACGGCGAGGGCGGCCAGCTGC
GGAACCCGGCGTACCTTCCCGCCCTCGTGGCCGCGTCCACCCAGCGCGGCGTCGACCAGCTGCTGACGCAGGTCGCATCG
CCGACGCGCCCGGCCCTCACCCCCGGCAACGTGTTCCCGGGCTGGAACGTCGGCAACCCGCTGCGCGCCGGCTGGGACGG
CACCCGCGGCGTGTCGCGGGCGGTCACCTTCACCAACGAGTACGGCGCCCAGCTGCGCGGCCACGTCTGGAAGCCGCTGC
CCGGCGCGCGGGACCCCTACACCGGCCGCCGCCTGCACGGCCCGTTCCCCGGCGTGGTCATCACCGAGGGCTCGGTGCAG
GGCTCCGAGGGCATGTACGAGTGGCTCGCGCAGGACCTCGCCGAGCGCGGCTACGTCGTGCTGACCTACGACGTCCAGGG
CCAGGGCACCAGCGAGACCTTCCCCCACCAGGAGTCCCCGGTTCCGGTGGACGGGCTGCCCTTCTGCAACCCGTTCGCGG
CACCCGACGACGGCGAGATGTCCGGCTGCCCGGGCGTGCCCTCCCAGCAGCTGTCGAACTTCGTGGTCGGCACCGAGGCC
GCGCTCGACTTCATCACCTCGCGCGCGAACCCGTTCCGGCGCAGCCTCGACCGCTCCCCCGACCCGCACCCGGCGACCCC
CGGGCGGACCACGCGGATCGCGATCATCGGTCACTCGATGGGTGCCGCGGCGGTCTCGAAGGTCCAGGGGACCGACCGCC
GGGTCGCCGCGGTCGTGGCGCTCGACAAGCTCGCGGGGCCGGACTCGAGCGGCGCGTTGGACGGGGCCGGCAACCGGCCG
GTCGTGCCGGCGCTGGCGGTGCAGTCGGAGTACGGCTTCACGGTCTCCCCGTGGTTCCTCAGCGGCGGCAGCTCGCTGAG
CCCGCAACCCAGCCCGGACGGGCCGGACCCGATGCGCGAGCGCGCGACCGGGTACGACGCCTGGCGCGCGGCCGGCGTGG
ACGCGATGCTCGTCGTACCCCGCGCCTCCACCCACCTGGAGTACACCGACATCCCGCTGGTGCTGCCGGCGAGCCGCTAC
GGCCAGGACCTCACCAGCGTCTACGTCCAACGGTGGCTGGACCGCTACCTCAAGCACCGCGACGACACCGCGGCGCTGCT
GGCCGACTCCTTCCGCTACCTGGAGCCGGCCGGCGACGGCGTCTGGTCGCCGGTGCGGCTGCACCGCGACGACCTGCTGA
GCTTCTACTACTGCTCGGCGTACGGCCTGGACACACCGCGCGGCGAGGTCGCCGACGGGGACGTCACGGGGGTCGGCTGC
CCGTCGTCCATCGGGTGA

Upstream 100 bases:

>100_bases
CGTACGCCGAGTACCAGGAGAAGACCGACCGCGAGATCCCGGTCTTCCTGCTCGAGCGCGTCTGACGTACCCCCCTCGCA
GGGTCGGTCGTTGACCGGCC

Downstream 100 bases:

>100_bases
TGCGTGGTGGCTGACCCGGCCGGGGTTTCCCAGCCATTTCCCGTCCCGCGACGGGGCGGGTGCTGCACCATGCGGAGGTG
ACCGCCACCACGCCGGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MRALTATLSLLLAGALAAPAAADPAPTDPAYTQRDAQNITDAYGRIDGEGGQLRNPAYLPALVAASTQRGVDQLLTQVAS
PTRPALTPGNVFPGWNVGNPLRAGWDGTRGVSRAVTFTNEYGAQLRGHVWKPLPGARDPYTGRRLHGPFPGVVITEGSVQ
GSEGMYEWLAQDLAERGYVVLTYDVQGQGTSETFPHQESPVPVDGLPFCNPFAAPDDGEMSGCPGVPSQQLSNFVVGTEA
ALDFITSRANPFRRSLDRSPDPHPATPGRTTRIAIIGHSMGAAAVSKVQGTDRRVAAVVALDKLAGPDSSGALDGAGNRP
VVPALAVQSEYGFTVSPWFLSGGSSLSPQPSPDGPDPMRERATGYDAWRAAGVDAMLVVPRASTHLEYTDIPLVLPASRY
GQDLTSVYVQRWLDRYLKHRDDTAALLADSFRYLEPAGDGVWSPVRLHRDDLLSFYYCSAYGLDTPRGEVADGDVTGVGC
PSSIG

Sequences:

>Translated_485_residues
MRALTATLSLLLAGALAAPAAADPAPTDPAYTQRDAQNITDAYGRIDGEGGQLRNPAYLPALVAASTQRGVDQLLTQVAS
PTRPALTPGNVFPGWNVGNPLRAGWDGTRGVSRAVTFTNEYGAQLRGHVWKPLPGARDPYTGRRLHGPFPGVVITEGSVQ
GSEGMYEWLAQDLAERGYVVLTYDVQGQGTSETFPHQESPVPVDGLPFCNPFAAPDDGEMSGCPGVPSQQLSNFVVGTEA
ALDFITSRANPFRRSLDRSPDPHPATPGRTTRIAIIGHSMGAAAVSKVQGTDRRVAAVVALDKLAGPDSSGALDGAGNRP
VVPALAVQSEYGFTVSPWFLSGGSSLSPQPSPDGPDPMRERATGYDAWRAAGVDAMLVVPRASTHLEYTDIPLVLPASRY
GQDLTSVYVQRWLDRYLKHRDDTAALLADSFRYLEPAGDGVWSPVRLHRDDLLSFYYCSAYGLDTPRGEVADGDVTGVGC
PSSIG
>Mature_485_residues
MRALTATLSLLLAGALAAPAAADPAPTDPAYTQRDAQNITDAYGRIDGEGGQLRNPAYLPALVAASTQRGVDQLLTQVAS
PTRPALTPGNVFPGWNVGNPLRAGWDGTRGVSRAVTFTNEYGAQLRGHVWKPLPGARDPYTGRRLHGPFPGVVITEGSVQ
GSEGMYEWLAQDLAERGYVVLTYDVQGQGTSETFPHQESPVPVDGLPFCNPFAAPDDGEMSGCPGVPSQQLSNFVVGTEA
ALDFITSRANPFRRSLDRSPDPHPATPGRTTRIAIIGHSMGAAAVSKVQGTDRRVAAVVALDKLAGPDSSGALDGAGNRP
VVPALAVQSEYGFTVSPWFLSGGSSLSPQPSPDGPDPMRERATGYDAWRAAGVDAMLVVPRASTHLEYTDIPLVLPASRY
GQDLTSVYVQRWLDRYLKHRDDTAALLADSFRYLEPAGDGVWSPVRLHRDDLLSFYYCSAYGLDTPRGEVADGDVTGVGC
PSSIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51453; Mature: 51453

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALTATLSLLLAGALAAPAAADPAPTDPAYTQRDAQNITDAYGRIDGEGGQLRNPAYLP
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
ALVAASTQRGVDQLLTQVASPTRPALTPGNVFPGWNVGNPLRAGWDGTRGVSRAVTFTNE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEECHH
YGAQLRGHVWKPLPGARDPYTGRRLHGPFPGVVITEGSVQGSEGMYEWLAQDLAERGYVV
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCEEE
LTYDVQGQGTSETFPHQESPVPVDGLPFCNPFAAPDDGEMSGCPGVPSQQLSNFVVGTEA
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
ALDFITSRANPFRRSLDRSPDPHPATPGRTTRIAIIGHSMGAAAVSKVQGTDRRVAAVVA
HHHHHHHCCCHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCHHHHHHHH
LDKLAGPDSSGALDGAGNRPVVPALAVQSEYGFTVSPWFLSGGSSLSPQPSPDGPDPMRE
HHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCEECCCCCCCCCCCCCCCCHHHH
RATGYDAWRAAGVDAMLVVPRASTHLEYTDIPLVLPASRYGQDLTSVYVQRWLDRYLKHR
HHCCCHHHHHCCCCEEEEECCCCCCCEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHCC
DDTAALLADSFRYLEPAGDGVWSPVRLHRDDLLSFYYCSAYGLDTPRGEVADGDVTGVGC
CCHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PSSIG
CCCCC
>Mature Secondary Structure
MRALTATLSLLLAGALAAPAAADPAPTDPAYTQRDAQNITDAYGRIDGEGGQLRNPAYLP
CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
ALVAASTQRGVDQLLTQVASPTRPALTPGNVFPGWNVGNPLRAGWDGTRGVSRAVTFTNE
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEECHH
YGAQLRGHVWKPLPGARDPYTGRRLHGPFPGVVITEGSVQGSEGMYEWLAQDLAERGYVV
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCEEE
LTYDVQGQGTSETFPHQESPVPVDGLPFCNPFAAPDDGEMSGCPGVPSQQLSNFVVGTEA
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
ALDFITSRANPFRRSLDRSPDPHPATPGRTTRIAIIGHSMGAAAVSKVQGTDRRVAAVVA
HHHHHHHCCCHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCHHHHHHHH
LDKLAGPDSSGALDGAGNRPVVPALAVQSEYGFTVSPWFLSGGSSLSPQPSPDGPDPMRE
HHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCEECCCCCCCCCCCCCCCCHHHH
RATGYDAWRAAGVDAMLVVPRASTHLEYTDIPLVLPASRYGQDLTSVYVQRWLDRYLKHR
HHCCCHHHHHCCCCEEEEECCCCCCCEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHCC
DDTAALLADSFRYLEPAGDGVWSPVRLHRDDLLSFYYCSAYGLDTPRGEVADGDVTGVGC
CCHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PSSIG
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA