| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714523
Identifier: 119714523
GI number: 119714523
Start: 274119
End: 275576
Strand: Reverse
Name: 119714523
Synonym: Noca_0256
Alternate gene names: NA
Gene position: 275576-274119 (Counterclockwise)
Preceding gene: 119714524
Following gene: 119714522
Centisome position: 5.53
GC content: 74.55
Gene sequence:
>1458_bases ATGCGCGCGCTGACCGCCACCCTGTCCCTGCTGCTCGCGGGTGCGCTCGCCGCCCCGGCGGCGGCCGACCCCGCGCCCAC CGACCCGGCGTACACCCAGCGCGACGCGCAGAACATCACCGACGCCTACGGCCGGATCGACGGCGAGGGCGGCCAGCTGC GGAACCCGGCGTACCTTCCCGCCCTCGTGGCCGCGTCCACCCAGCGCGGCGTCGACCAGCTGCTGACGCAGGTCGCATCG CCGACGCGCCCGGCCCTCACCCCCGGCAACGTGTTCCCGGGCTGGAACGTCGGCAACCCGCTGCGCGCCGGCTGGGACGG CACCCGCGGCGTGTCGCGGGCGGTCACCTTCACCAACGAGTACGGCGCCCAGCTGCGCGGCCACGTCTGGAAGCCGCTGC CCGGCGCGCGGGACCCCTACACCGGCCGCCGCCTGCACGGCCCGTTCCCCGGCGTGGTCATCACCGAGGGCTCGGTGCAG GGCTCCGAGGGCATGTACGAGTGGCTCGCGCAGGACCTCGCCGAGCGCGGCTACGTCGTGCTGACCTACGACGTCCAGGG CCAGGGCACCAGCGAGACCTTCCCCCACCAGGAGTCCCCGGTTCCGGTGGACGGGCTGCCCTTCTGCAACCCGTTCGCGG CACCCGACGACGGCGAGATGTCCGGCTGCCCGGGCGTGCCCTCCCAGCAGCTGTCGAACTTCGTGGTCGGCACCGAGGCC GCGCTCGACTTCATCACCTCGCGCGCGAACCCGTTCCGGCGCAGCCTCGACCGCTCCCCCGACCCGCACCCGGCGACCCC CGGGCGGACCACGCGGATCGCGATCATCGGTCACTCGATGGGTGCCGCGGCGGTCTCGAAGGTCCAGGGGACCGACCGCC GGGTCGCCGCGGTCGTGGCGCTCGACAAGCTCGCGGGGCCGGACTCGAGCGGCGCGTTGGACGGGGCCGGCAACCGGCCG GTCGTGCCGGCGCTGGCGGTGCAGTCGGAGTACGGCTTCACGGTCTCCCCGTGGTTCCTCAGCGGCGGCAGCTCGCTGAG CCCGCAACCCAGCCCGGACGGGCCGGACCCGATGCGCGAGCGCGCGACCGGGTACGACGCCTGGCGCGCGGCCGGCGTGG ACGCGATGCTCGTCGTACCCCGCGCCTCCACCCACCTGGAGTACACCGACATCCCGCTGGTGCTGCCGGCGAGCCGCTAC GGCCAGGACCTCACCAGCGTCTACGTCCAACGGTGGCTGGACCGCTACCTCAAGCACCGCGACGACACCGCGGCGCTGCT GGCCGACTCCTTCCGCTACCTGGAGCCGGCCGGCGACGGCGTCTGGTCGCCGGTGCGGCTGCACCGCGACGACCTGCTGA GCTTCTACTACTGCTCGGCGTACGGCCTGGACACACCGCGCGGCGAGGTCGCCGACGGGGACGTCACGGGGGTCGGCTGC CCGTCGTCCATCGGGTGA
Upstream 100 bases:
>100_bases CGTACGCCGAGTACCAGGAGAAGACCGACCGCGAGATCCCGGTCTTCCTGCTCGAGCGCGTCTGACGTACCCCCCTCGCA GGGTCGGTCGTTGACCGGCC
Downstream 100 bases:
>100_bases TGCGTGGTGGCTGACCCGGCCGGGGTTTCCCAGCCATTTCCCGTCCCGCGACGGGGCGGGTGCTGCACCATGCGGAGGTG ACCGCCACCACGCCGGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MRALTATLSLLLAGALAAPAAADPAPTDPAYTQRDAQNITDAYGRIDGEGGQLRNPAYLPALVAASTQRGVDQLLTQVAS PTRPALTPGNVFPGWNVGNPLRAGWDGTRGVSRAVTFTNEYGAQLRGHVWKPLPGARDPYTGRRLHGPFPGVVITEGSVQ GSEGMYEWLAQDLAERGYVVLTYDVQGQGTSETFPHQESPVPVDGLPFCNPFAAPDDGEMSGCPGVPSQQLSNFVVGTEA ALDFITSRANPFRRSLDRSPDPHPATPGRTTRIAIIGHSMGAAAVSKVQGTDRRVAAVVALDKLAGPDSSGALDGAGNRP VVPALAVQSEYGFTVSPWFLSGGSSLSPQPSPDGPDPMRERATGYDAWRAAGVDAMLVVPRASTHLEYTDIPLVLPASRY GQDLTSVYVQRWLDRYLKHRDDTAALLADSFRYLEPAGDGVWSPVRLHRDDLLSFYYCSAYGLDTPRGEVADGDVTGVGC PSSIG
Sequences:
>Translated_485_residues MRALTATLSLLLAGALAAPAAADPAPTDPAYTQRDAQNITDAYGRIDGEGGQLRNPAYLPALVAASTQRGVDQLLTQVAS PTRPALTPGNVFPGWNVGNPLRAGWDGTRGVSRAVTFTNEYGAQLRGHVWKPLPGARDPYTGRRLHGPFPGVVITEGSVQ GSEGMYEWLAQDLAERGYVVLTYDVQGQGTSETFPHQESPVPVDGLPFCNPFAAPDDGEMSGCPGVPSQQLSNFVVGTEA ALDFITSRANPFRRSLDRSPDPHPATPGRTTRIAIIGHSMGAAAVSKVQGTDRRVAAVVALDKLAGPDSSGALDGAGNRP VVPALAVQSEYGFTVSPWFLSGGSSLSPQPSPDGPDPMRERATGYDAWRAAGVDAMLVVPRASTHLEYTDIPLVLPASRY GQDLTSVYVQRWLDRYLKHRDDTAALLADSFRYLEPAGDGVWSPVRLHRDDLLSFYYCSAYGLDTPRGEVADGDVTGVGC PSSIG >Mature_485_residues MRALTATLSLLLAGALAAPAAADPAPTDPAYTQRDAQNITDAYGRIDGEGGQLRNPAYLPALVAASTQRGVDQLLTQVAS PTRPALTPGNVFPGWNVGNPLRAGWDGTRGVSRAVTFTNEYGAQLRGHVWKPLPGARDPYTGRRLHGPFPGVVITEGSVQ GSEGMYEWLAQDLAERGYVVLTYDVQGQGTSETFPHQESPVPVDGLPFCNPFAAPDDGEMSGCPGVPSQQLSNFVVGTEA ALDFITSRANPFRRSLDRSPDPHPATPGRTTRIAIIGHSMGAAAVSKVQGTDRRVAAVVALDKLAGPDSSGALDGAGNRP VVPALAVQSEYGFTVSPWFLSGGSSLSPQPSPDGPDPMRERATGYDAWRAAGVDAMLVVPRASTHLEYTDIPLVLPASRY GQDLTSVYVQRWLDRYLKHRDDTAALLADSFRYLEPAGDGVWSPVRLHRDDLLSFYYCSAYGLDTPRGEVADGDVTGVGC PSSIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51453; Mature: 51453
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRALTATLSLLLAGALAAPAAADPAPTDPAYTQRDAQNITDAYGRIDGEGGQLRNPAYLP CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH ALVAASTQRGVDQLLTQVASPTRPALTPGNVFPGWNVGNPLRAGWDGTRGVSRAVTFTNE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEECHH YGAQLRGHVWKPLPGARDPYTGRRLHGPFPGVVITEGSVQGSEGMYEWLAQDLAERGYVV HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCEEE LTYDVQGQGTSETFPHQESPVPVDGLPFCNPFAAPDDGEMSGCPGVPSQQLSNFVVGTEA EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ALDFITSRANPFRRSLDRSPDPHPATPGRTTRIAIIGHSMGAAAVSKVQGTDRRVAAVVA HHHHHHHCCCHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCHHHHHHHH LDKLAGPDSSGALDGAGNRPVVPALAVQSEYGFTVSPWFLSGGSSLSPQPSPDGPDPMRE HHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCEECCCCCCCCCCCCCCCCHHHH RATGYDAWRAAGVDAMLVVPRASTHLEYTDIPLVLPASRYGQDLTSVYVQRWLDRYLKHR HHCCCHHHHHCCCCEEEEECCCCCCCEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHCC DDTAALLADSFRYLEPAGDGVWSPVRLHRDDLLSFYYCSAYGLDTPRGEVADGDVTGVGC CCHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PSSIG CCCCC >Mature Secondary Structure MRALTATLSLLLAGALAAPAAADPAPTDPAYTQRDAQNITDAYGRIDGEGGQLRNPAYLP CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHH ALVAASTQRGVDQLLTQVASPTRPALTPGNVFPGWNVGNPLRAGWDGTRGVSRAVTFTNE HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEECHH YGAQLRGHVWKPLPGARDPYTGRRLHGPFPGVVITEGSVQGSEGMYEWLAQDLAERGYVV HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCEEE LTYDVQGQGTSETFPHQESPVPVDGLPFCNPFAAPDDGEMSGCPGVPSQQLSNFVVGTEA EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH ALDFITSRANPFRRSLDRSPDPHPATPGRTTRIAIIGHSMGAAAVSKVQGTDRRVAAVVA HHHHHHHCCCHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHCCCCHHHHHHHH LDKLAGPDSSGALDGAGNRPVVPALAVQSEYGFTVSPWFLSGGSSLSPQPSPDGPDPMRE HHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCEECCCEECCCCCCCCCCCCCCCCHHHH RATGYDAWRAAGVDAMLVVPRASTHLEYTDIPLVLPASRYGQDLTSVYVQRWLDRYLKHR HHCCCHHHHHCCCCEEEEECCCCCCCEECCCCEEECCHHHHHHHHHHHHHHHHHHHHHCC DDTAALLADSFRYLEPAGDGVWSPVRLHRDDLLSFYYCSAYGLDTPRGEVADGDVTGVGC CCHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC PSSIG CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA