| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714524
Identifier: 119714524
GI number: 119714524
Start: 275612
End: 276055
Strand: Reverse
Name: 119714524
Synonym: Noca_0257
Alternate gene names: NA
Gene position: 276055-275612 (Counterclockwise)
Preceding gene: 119714529
Following gene: 119714523
Centisome position: 5.54
GC content: 68.69
Gene sequence:
>444_bases ATGACACTTGACGGCGAGTACGAGCCCAACCCCCAGCAATGGGTCCGCGACCAGGTCGAGGAGTTCGAGGCCTCCAACGG GCAGCGCGCGAACATCCTGATGGACCACCCCGAGTGGCCGATCGTGGTCATCACCTCGAGGGGCGCGACGTCAGGCAAGC TGCGCAAGAACCCGGTCATGCGGGTGGAGAAGGACGGCGTCTACGCCGCGATCGCCTCGAAGGGCGGCACCCCCGAGCAC CCGAGCTGGTACCACAACTTCGTCGCGCACCCCGAGGTCGACCTGCAGGACCGCAGCGAGAAGCACAGCTACCGCGCCCG GATCGCCGAGGGCGCCGAGCGCGCCGAGTGGTGGGAGCGCGCCGTCGCGCAGTACGCGCCGTACGCCGAGTACCAGGAGA AGACCGACCGCGAGATCCCGGTCTTCCTGCTCGAGCGCGTCTGA
Upstream 100 bases:
>100_bases GGCGTCGGCGTCGAAGATCTCCGACACCCCGTCGATCGCGCTCATGCGGGCGAGGCTATCGCCGGGGAATGCCGCGAGGC CGACTGGGCATTGACCAGAT
Downstream 100 bases:
>100_bases CGTACCCCCCTCGCAGGGTCGGTCGTTGACCGGCCATGCGCGCGCTGACCGCCACCCTGTCCCTGCTGCTCGCGGGTGCG CTCGCCGCCCCGGCGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MTLDGEYEPNPQQWVRDQVEEFEASNGQRANILMDHPEWPIVVITSRGATSGKLRKNPVMRVEKDGVYAAIASKGGTPEH PSWYHNFVAHPEVDLQDRSEKHSYRARIAEGAERAEWWERAVAQYAPYAEYQEKTDREIPVFLLERV
Sequences:
>Translated_147_residues MTLDGEYEPNPQQWVRDQVEEFEASNGQRANILMDHPEWPIVVITSRGATSGKLRKNPVMRVEKDGVYAAIASKGGTPEH PSWYHNFVAHPEVDLQDRSEKHSYRARIAEGAERAEWWERAVAQYAPYAEYQEKTDREIPVFLLERV >Mature_146_residues TLDGEYEPNPQQWVRDQVEEFEASNGQRANILMDHPEWPIVVITSRGATSGKLRKNPVMRVEKDGVYAAIASKGGTPEHP SWYHNFVAHPEVDLQDRSEKHSYRARIAEGAERAEWWERAVAQYAPYAEYQEKTDREIPVFLLERV
Specific function: May be involved in the activation of oxazole analogs [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the deazaflavin-dependent nitroreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004378 [H]
Pfam domain/function: PF04075 DUF385 [H]
EC number: NA
Molecular weight: Translated: 17009; Mature: 16878
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDGEYEPNPQQWVRDQVEEFEASNGQRANILMDHPEWPIVVITSRGATSGKLRKNPVM CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCE RVEKDGVYAAIASKGGTPEHPSWYHNFVAHPEVDLQDRSEKHSYRARIAEGAERAEWWER EEECCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH AVAQYAPYAEYQEKTDREIPVFLLERV HHHHHCCCHHHHHHCCCCCCCEEEECC >Mature Secondary Structure TLDGEYEPNPQQWVRDQVEEFEASNGQRANILMDHPEWPIVVITSRGATSGKLRKNPVM CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEECCCCCCCCCCCCCCE RVEKDGVYAAIASKGGTPEHPSWYHNFVAHPEVDLQDRSEKHSYRARIAEGAERAEWWER EEECCCEEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH AVAQYAPYAEYQEKTDREIPVFLLERV HHHHHCCCHHHHHHCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]