| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is cutL [H]
Identifier: 119714497
GI number: 119714497
Start: 245931
End: 248345
Strand: Direct
Name: cutL [H]
Synonym: Noca_0230
Alternate gene names: 119714497
Gene position: 245931-248345 (Clockwise)
Preceding gene: 119714496
Following gene: 119714498
Centisome position: 4.93
GC content: 69.44
Gene sequence:
>2415_bases GTGACCGCCACCGAGCCCGCACCGACCACCAGCCGGGCGCTGGACGAGATCAAGATCGGCGGGATGGGCGCGAGCCGCAG GCGCGTCGAGGACAACCGCTTCATCCGCGGCCGCGGCCACTACGTCGACGACGTGGTGCTGCCCGGGATGCTGCACATGG AGATCCTGCGCAGCCCGGTCGCGCACGCGAGGATCGTCTCGATCGACACCACCCGGGCGTGGAACATGCCCGGCGTACGC CTGGTGCTGACCGGCGAGATGATGGCGACCCGCAACCTGGCCTGGATGCCGACGCTGAGCTACGACACCCAGGCCGTGCT GGCCACCGACAAGGTGCGGTTCCAGGGCCAGGAGGTCGCCTGCGTCATCGCCGACGACCCCTACATCGCCAAGGACGCGT GCGAGGCCATCGAGGTCGAGTACGAGCAGCTGCCGGTGATCGTGAACCCGACCCAGGCGATGGCCCCCGACGCCCCGATC ATCCGGGACGACAAGGAGGGCCAGGCCGACAACGTCATCTTCGACTGGGAGGTCGGCGACAAGGAGGGCACCGACCGCGC GTTCGCGGAGGCGGACCACGTCTCGACGATCCGGATGCACTACCCGCGCTCGCACCCCTCGCCGCTGGAGTGCTGCGGCT CGGTCGCGGACTTCGACCGCGCGACCGGCAAGCTCACGATCTACATGACCACGCAAGCGCCGCACATCGTGCGCGCCGCG GTCGCGCTGATCGCCGAGCTGCCCGAGCACATGATCCGGATCGTCTCGCCGGACCTCGGCGGCGGTTTCGGCAACAAGGT GCCGGTCTACCCGGGCTACGTGATGACGATCCTCGCGTCGATCCTGCTGGAGCGGCCGGTCAAGTGGATCGAGGACCGCA GCGGCAACCTGATCTCCACCGGGTTCGGCCGCGACGTCTACCTCGAGGGTGAGCTGGCGCTGCGCCGCGACGGCAAGATC CTGGCGGTGCGGATGCACACCGACTCCGACCACGGCGCGTTCTTCGGCGACGCCCAGCCGAGCAAGTTCAAGATCGGGCT GCTGCACTCGACGTTCTCCTGCTACGACATCCCGACCGCGCACCTGACCGCACGCGGCGTCTACACGAACAAGGCGCCGG GCGGCGTCGCGTACCGGTGCTCGTTCCGCGTCACCGAGGCGATGTTCTTCCAGGAGCGGATGATGCAGGCGGCTGCCGAC GAGCTGGGCATCGACCAGGCGGAGTTCCGCCGGATGAACTTCGTCCGCGACGACGACTTCCCGCACCGCACGCCGTTCGG TTTCCTCACCGACTCCGGGCAGTACGCCAAGTGCCTCCAGGTCGGCCTCGACGCGATCGACTACGAGGGGTTCCGGCGCG AGCAGGCCGAGGCCGCGAAGCAGGGCCGGCTGCTCGGCATCGGCATCTCCTGCATGACCGAGCCGCTCGGCGCCGGCAAC AGCCGCGAGTACGACATCCTCGGCATCAAGATGTTCGACTCCGCCGAGCTGCGGGTCCACATGACCGGCAAGGCGATCCT ACGAACCGGCGCGAAGACCCAGGGCCAGGGACACGAGACCACGTGGGCGCAGATCGTCGCGCACGAGCTCGGCCTCCCCG CCGACGACGTCGTGGTCGAGGAGGGCGACACCGACACCGCGCCGTTCGGCATGGGCACCTACGCCTCGCGCAGCACCCCG GTCGCGGGCGCCGCGGTCGCGATGGTGGCGCGGAAGATCCGGGCCAAGGCCCGCAAGCTCGCCGCCCACCTGCTCGAGGT CTCCGAGGAGGACGTCGAGTGGGAGCTCGGCCGGTTCTACGTCCGGTCCGCGCCGGACCGCGGCGTGACGATCCAGGAGT GCGCGATGGCGGCGTACTCCAACATGCCCGACGGCCTCGAGCCCGGGCTGGAGGCCAACGCCTACTACGACCCGCCCAAC CTGACCTGGCCGTTCGGCTGCTACATCGTCACCGTCGAGGTCGACCCGATGACCGGCGTGTGGGACGTGCTGCGCGTGGT GGCCGTCGACGACTGCGGCGTGCGCATCAACCCGATGATCGTCGAGGGCCAGATCATGGGCGGCCTGACCGAGGCCTACG CGATGTCGAGCATGCAGTTCATCACCTTCGACGCCGACGGCAACTGCATCGGGTCGAACTTCATGGACTACCTGCTCCCG ACCGCGTGGGAGACCCCCGGCTACGAGCTGCACGAGGTCGTCACGCCCTGCCCGCACCACCCGATCGGTGCCAAGGGCAT CGGCGAGTGCGCGACGGTCGGCGGCCCGGCGGCGTTCGTCAACGCCGTCATGGACGCACTCAAGCAGTACGGCGTGCGCA ACGTCGACATGCCGCTGCTGCCCGACCGCGTCCACGAGGCGATCACCCAGCGCCACGACGTGTCCGGTGCCCCGCCGATC AGGACCGACGCATGA
Upstream 100 bases:
>100_bases GCAACCTGTGCCGCTGCACCGGCTACCAGAACATCGTGAAGTCGGTGCTGTGGGCGGCCAAGCAGATGAACGGCGCCTCG GCTGACGAGGGGAGCGCGGA
Downstream 100 bases:
>100_bases ACGAGCCCGATCTCATCGCCGACCTGGGAGGCCAGGAGTACGCCGTCGCGACGGTGGTGTGGCGGCAGGCGCCGTCGTCC GGCCAGATCGGGTCGCGCGC
Product: xanthine dehydrogenase, molybdenum binding subunit apoprotein
Products: NA
Alternate protein names: CO dehydrogenase subunit L; CO-DH L [H]
Number of amino acids: Translated: 804; Mature: 803
Protein sequence:
>804_residues MTATEPAPTTSRALDEIKIGGMGASRRRVEDNRFIRGRGHYVDDVVLPGMLHMEILRSPVAHARIVSIDTTRAWNMPGVR LVLTGEMMATRNLAWMPTLSYDTQAVLATDKVRFQGQEVACVIADDPYIAKDACEAIEVEYEQLPVIVNPTQAMAPDAPI IRDDKEGQADNVIFDWEVGDKEGTDRAFAEADHVSTIRMHYPRSHPSPLECCGSVADFDRATGKLTIYMTTQAPHIVRAA VALIAELPEHMIRIVSPDLGGGFGNKVPVYPGYVMTILASILLERPVKWIEDRSGNLISTGFGRDVYLEGELALRRDGKI LAVRMHTDSDHGAFFGDAQPSKFKIGLLHSTFSCYDIPTAHLTARGVYTNKAPGGVAYRCSFRVTEAMFFQERMMQAAAD ELGIDQAEFRRMNFVRDDDFPHRTPFGFLTDSGQYAKCLQVGLDAIDYEGFRREQAEAAKQGRLLGIGISCMTEPLGAGN SREYDILGIKMFDSAELRVHMTGKAILRTGAKTQGQGHETTWAQIVAHELGLPADDVVVEEGDTDTAPFGMGTYASRSTP VAGAAVAMVARKIRAKARKLAAHLLEVSEEDVEWELGRFYVRSAPDRGVTIQECAMAAYSNMPDGLEPGLEANAYYDPPN LTWPFGCYIVTVEVDPMTGVWDVLRVVAVDDCGVRINPMIVEGQIMGGLTEAYAMSSMQFITFDADGNCIGSNFMDYLLP TAWETPGYELHEVVTPCPHHPIGAKGIGECATVGGPAAFVNAVMDALKQYGVRNVDMPLLPDRVHEAITQRHDVSGAPPI RTDA
Sequences:
>Translated_804_residues MTATEPAPTTSRALDEIKIGGMGASRRRVEDNRFIRGRGHYVDDVVLPGMLHMEILRSPVAHARIVSIDTTRAWNMPGVR LVLTGEMMATRNLAWMPTLSYDTQAVLATDKVRFQGQEVACVIADDPYIAKDACEAIEVEYEQLPVIVNPTQAMAPDAPI IRDDKEGQADNVIFDWEVGDKEGTDRAFAEADHVSTIRMHYPRSHPSPLECCGSVADFDRATGKLTIYMTTQAPHIVRAA VALIAELPEHMIRIVSPDLGGGFGNKVPVYPGYVMTILASILLERPVKWIEDRSGNLISTGFGRDVYLEGELALRRDGKI LAVRMHTDSDHGAFFGDAQPSKFKIGLLHSTFSCYDIPTAHLTARGVYTNKAPGGVAYRCSFRVTEAMFFQERMMQAAAD ELGIDQAEFRRMNFVRDDDFPHRTPFGFLTDSGQYAKCLQVGLDAIDYEGFRREQAEAAKQGRLLGIGISCMTEPLGAGN SREYDILGIKMFDSAELRVHMTGKAILRTGAKTQGQGHETTWAQIVAHELGLPADDVVVEEGDTDTAPFGMGTYASRSTP VAGAAVAMVARKIRAKARKLAAHLLEVSEEDVEWELGRFYVRSAPDRGVTIQECAMAAYSNMPDGLEPGLEANAYYDPPN LTWPFGCYIVTVEVDPMTGVWDVLRVVAVDDCGVRINPMIVEGQIMGGLTEAYAMSSMQFITFDADGNCIGSNFMDYLLP TAWETPGYELHEVVTPCPHHPIGAKGIGECATVGGPAAFVNAVMDALKQYGVRNVDMPLLPDRVHEAITQRHDVSGAPPI RTDA >Mature_803_residues TATEPAPTTSRALDEIKIGGMGASRRRVEDNRFIRGRGHYVDDVVLPGMLHMEILRSPVAHARIVSIDTTRAWNMPGVRL VLTGEMMATRNLAWMPTLSYDTQAVLATDKVRFQGQEVACVIADDPYIAKDACEAIEVEYEQLPVIVNPTQAMAPDAPII RDDKEGQADNVIFDWEVGDKEGTDRAFAEADHVSTIRMHYPRSHPSPLECCGSVADFDRATGKLTIYMTTQAPHIVRAAV ALIAELPEHMIRIVSPDLGGGFGNKVPVYPGYVMTILASILLERPVKWIEDRSGNLISTGFGRDVYLEGELALRRDGKIL AVRMHTDSDHGAFFGDAQPSKFKIGLLHSTFSCYDIPTAHLTARGVYTNKAPGGVAYRCSFRVTEAMFFQERMMQAAADE LGIDQAEFRRMNFVRDDDFPHRTPFGFLTDSGQYAKCLQVGLDAIDYEGFRREQAEAAKQGRLLGIGISCMTEPLGAGNS REYDILGIKMFDSAELRVHMTGKAILRTGAKTQGQGHETTWAQIVAHELGLPADDVVVEEGDTDTAPFGMGTYASRSTPV AGAAVAMVARKIRAKARKLAAHLLEVSEEDVEWELGRFYVRSAPDRGVTIQECAMAAYSNMPDGLEPGLEANAYYDPPNL TWPFGCYIVTVEVDPMTGVWDVLRVVAVDDCGVRINPMIVEGQIMGGLTEAYAMSSMQFITFDADGNCIGSNFMDYLLPT AWETPGYELHEVVTPCPHHPIGAKGIGECATVGGPAAFVNAVMDALKQYGVRNVDMPLLPDRVHEAITQRHDVSGAPPIR TDA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1529
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI91823271, Length=800, Percent_Identity=24.375, Blast_Score=171, Evalue=3e-42, Organism=Homo sapiens, GI71773480, Length=772, Percent_Identity=23.8341968911917, Blast_Score=157, Evalue=6e-38, Organism=Escherichia coli, GI1789230, Length=789, Percent_Identity=29.6577946768061, Blast_Score=255, Evalue=1e-68, Organism=Escherichia coli, GI1789246, Length=794, Percent_Identity=23.9294710327456, Blast_Score=179, Evalue=5e-46, Organism=Escherichia coli, GI1786478, Length=786, Percent_Identity=23.5368956743003, Blast_Score=105, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17540638, Length=788, Percent_Identity=23.0964467005076, Blast_Score=160, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17539860, Length=778, Percent_Identity=22.107969151671, Blast_Score=125, Evalue=1e-28, Organism=Caenorhabditis elegans, GI32566215, Length=776, Percent_Identity=21.520618556701, Blast_Score=118, Evalue=1e-26, Organism=Drosophila melanogaster, GI17737937, Length=768, Percent_Identity=24.3489583333333, Blast_Score=161, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000674 - InterPro: IPR008274 - InterPro: IPR012780 [H]
Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 88088; Mature: 87957
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATEPAPTTSRALDEIKIGGMGASRRRVEDNRFIRGRGHYVDDVVLPGMLHMEILRSPV CCCCCCCCCHHHHHHHEEECCCCCCCCCCCCCCEEECCCCEECHHHCCCHHHHHHHHCCC AHARIVSIDTTRAWNMPGVRLVLTGEMMATRNLAWMPTLSYDTQAVLATDKVRFQGQEVA HHEEEEEEECCCCCCCCCEEEEEECCHHHHCCEEEEEECCCCCEEEEEECCEEECCCEEE CVIADDPYIAKDACEAIEVEYEQLPVIVNPTQAMAPDAPIIRDDKEGQADNVIFDWEVGD EEEECCCCCHHHHHHHHHHHHHHCCEEECCHHHCCCCCCCEECCCCCCCCCEEEEEECCC KEGTDRAFAEADHVSTIRMHYPRSHPSPLECCGSVADFDRATGKLTIYMTTQAPHIVRAA CCCCCHHHHHHCCCEEEEEECCCCCCCHHHHHCCHHHHHCCCCEEEEEEECCCCHHHHHH VALIAELPEHMIRIVSPDLGGGFGNKVPVYPGYVMTILASILLERPVKWIEDRSGNLIST HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCEEEE GFGRDVYLEGELALRRDGKILAVRMHTDSDHGAFFGDAQPSKFKIGLLHSTFSCYDIPTA CCCCEEEEECCEEEECCCCEEEEEEECCCCCCCEECCCCCCEEEEEEEECCCEEEECCCH HLTARGVYTNKAPGGVAYRCSFRVTEAMFFQERMMQAAADELGIDQAEFRRMNFVRDDDF HEEECCEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCC PHRTPFGFLTDSGQYAKCLQVGLDAIDYEGFRREQAEAAKQGRLLGIGISCMTEPLGAGN CCCCCCCEEECCCCHHHHHHHCCHHHCCCHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCC SREYDILGIKMFDSAELRVHMTGKAILRTGAKTQGQGHETTWAQIVAHELGLPADDVVVE CCCEEEEEEEEECCCEEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEE EGDTDTAPFGMGTYASRSTPVAGAAVAMVARKIRAKARKLAAHLLEVSEEDVEWELGRFY CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCEEE VRSAPDRGVTIQECAMAAYSNMPDGLEPGLEANAYYDPPNLTWPFGCYIVTVEVDPMTGV EECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEEEEECCCCCH WDVLRVVAVDDCGVRINPMIVEGQIMGGLTEAYAMSSMQFITFDADGNCIGSNFMDYLLP HHHHHHHEECCCCEEECCEEEECCHHCCHHHHHHHCCEEEEEECCCCCEECHHHHHHHCC TAWETPGYELHEVVTPCPHHPIGAKGIGECATVGGPAAFVNAVMDALKQYGVRNVDMPLL CCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC PDRVHEAITQRHDVSGAPPIRTDA HHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure TATEPAPTTSRALDEIKIGGMGASRRRVEDNRFIRGRGHYVDDVVLPGMLHMEILRSPV CCCCCCCCHHHHHHHEEECCCCCCCCCCCCCCEEECCCCEECHHHCCCHHHHHHHHCCC AHARIVSIDTTRAWNMPGVRLVLTGEMMATRNLAWMPTLSYDTQAVLATDKVRFQGQEVA HHEEEEEEECCCCCCCCCEEEEEECCHHHHCCEEEEEECCCCCEEEEEECCEEECCCEEE CVIADDPYIAKDACEAIEVEYEQLPVIVNPTQAMAPDAPIIRDDKEGQADNVIFDWEVGD EEEECCCCCHHHHHHHHHHHHHHCCEEECCHHHCCCCCCCEECCCCCCCCCEEEEEECCC KEGTDRAFAEADHVSTIRMHYPRSHPSPLECCGSVADFDRATGKLTIYMTTQAPHIVRAA CCCCCHHHHHHCCCEEEEEECCCCCCCHHHHHCCHHHHHCCCCEEEEEEECCCCHHHHHH VALIAELPEHMIRIVSPDLGGGFGNKVPVYPGYVMTILASILLERPVKWIEDRSGNLIST HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCEEEE GFGRDVYLEGELALRRDGKILAVRMHTDSDHGAFFGDAQPSKFKIGLLHSTFSCYDIPTA CCCCEEEEECCEEEECCCCEEEEEEECCCCCCCEECCCCCCEEEEEEEECCCEEEECCCH HLTARGVYTNKAPGGVAYRCSFRVTEAMFFQERMMQAAADELGIDQAEFRRMNFVRDDDF HEEECCEECCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCC PHRTPFGFLTDSGQYAKCLQVGLDAIDYEGFRREQAEAAKQGRLLGIGISCMTEPLGAGN CCCCCCCEEECCCCHHHHHHHCCHHHCCCHHHHHHHHHHHCCCEEEEEHHHHCCCCCCCC SREYDILGIKMFDSAELRVHMTGKAILRTGAKTQGQGHETTWAQIVAHELGLPADDVVVE CCCEEEEEEEEECCCEEEEEECCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEE EGDTDTAPFGMGTYASRSTPVAGAAVAMVARKIRAKARKLAAHLLEVSEEDVEWELGRFY CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCEEE VRSAPDRGVTIQECAMAAYSNMPDGLEPGLEANAYYDPPNLTWPFGCYIVTVEVDPMTGV EECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCEEEEEEEEECCCCCH WDVLRVVAVDDCGVRINPMIVEGQIMGGLTEAYAMSSMQFITFDADGNCIGSNFMDYLLP HHHHHHHEECCCCEEECCEEEECCHHCCHHHHHHHCCEEEEEECCCCCEECHHHHHHHCC TAWETPGYELHEVVTPCPHHPIGAKGIGECATVGGPAAFVNAVMDALKQYGVRNVDMPLL CCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCC PDRVHEAITQRHDVSGAPPIRTDA HHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]