| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is mhpC2 [H]
Identifier: 119714477
GI number: 119714477
Start: 225787
End: 226626
Strand: Direct
Name: mhpC2 [H]
Synonym: Noca_0210
Alternate gene names: 119714477
Gene position: 225787-226626 (Clockwise)
Preceding gene: 119714476
Following gene: 119714478
Centisome position: 4.53
GC content: 70.95
Gene sequence:
>840_bases GTGATCCGCACCCGCGACGTCGAGGTCGGCGACCTGTCCTTCCGGCTCTACGAGACCGGCGAGACCGGGGCCGAGGCCGT GCTGTTCCTGCACGGCTCGGGCCCCGGCGCCACCGGCCTGTCGAACTGGGAACGGATCATCGAGGACCTCGGCGACCGGT TCCACTGCCTGGCACCCGACATGATCGGGTTCGGCGACTCCGCGCACCCGGTCGACCCGCCGCGTGGGATGGGTCCCTTC AACGAGCTGCGCGCCCAGGCGCTGCTGGGCCTGCTCGACGTGCTCGGCCTGGAGAAGGTGCACCTGGTCGGCAACTCGAT GGGCGGCCAGCTCGCGCTGCTCATGGTGCTCGCCCAGCCCGACCGGGTCGGCAAGATCCTGCTGATGGGCAGCGGCGGCG CCCCGGACCTGCCCGTCTCCCCGGGCCTGGCCCACCTGCGCACGTTCTACGACGCGCCTTCGGCGGAGAGTCTCGAGCGG CTGCTCGAGCAGTTCGTCTTCGACCTCGAGCCGATGCGTCCGGTGATCGACCGGGTGGTCAAGGAGCGGATGGCGTACGT CGAGCGCGCCGACGTGCGCCGCTCGCACGCCGCCAGCTTCGACCCCGACGGGCCGCGGCGTTTCTTCACCCCCGAGGAGC TGGCCGGCATCGAGCACGACGTCCTCGTCGTGCACGGCCGCGACGACCGGATCATCCCGACCCAGGCGAGCCGGTGGTTC GCCGACCACCTGCCGAACGCGAACCTCTACGTGATCGGCCGGTGCGGGCACTGGACCCAGATCGAGCACCCGACGACGTT CGAGACGCTGTTGACCGGTCTCGTCGACGGCGTGATCTAG
Upstream 100 bases:
>100_bases TCGTCTCCGCGAGCAGCCACGCGTTCCTCTACGCCGACCCGCTGGCGCGGGCCTGGGCGGGCCGGCACCTCGGTGCCGAG AACCTGGTCGAGGTGCACCT
Downstream 100 bases:
>100_bases GAGTCGCGGGATGCGGATCGCCAACCACGACGGACGCGCCGTACTCGTGCTGGGCGAGGACAAGGGCGTCGACATCGAGC GCGCCAGCCACGGCGAGCTC
Product: alpha/beta hydrolase fold protein
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: 2-hydroxy-6-ketonona-2,4-diene-1,9-dioic acid 5,6-hydrolase 2; 2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioic acid 5,6-hydrolase 2; 2-hydroxy-6-oxonona-2,4-diene-1,9-dioic acid 5,6-hydrolase 2 [H]
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MIRTRDVEVGDLSFRLYETGETGAEAVLFLHGSGPGATGLSNWERIIEDLGDRFHCLAPDMIGFGDSAHPVDPPRGMGPF NELRAQALLGLLDVLGLEKVHLVGNSMGGQLALLMVLAQPDRVGKILLMGSGGAPDLPVSPGLAHLRTFYDAPSAESLER LLEQFVFDLEPMRPVIDRVVKERMAYVERADVRRSHAASFDPDGPRRFFTPEELAGIEHDVLVVHGRDDRIIPTQASRWF ADHLPNANLYVIGRCGHWTQIEHPTTFETLLTGLVDGVI
Sequences:
>Translated_279_residues MIRTRDVEVGDLSFRLYETGETGAEAVLFLHGSGPGATGLSNWERIIEDLGDRFHCLAPDMIGFGDSAHPVDPPRGMGPF NELRAQALLGLLDVLGLEKVHLVGNSMGGQLALLMVLAQPDRVGKILLMGSGGAPDLPVSPGLAHLRTFYDAPSAESLER LLEQFVFDLEPMRPVIDRVVKERMAYVERADVRRSHAASFDPDGPRRFFTPEELAGIEHDVLVVHGRDDRIIPTQASRWF ADHLPNANLYVIGRCGHWTQIEHPTTFETLLTGLVDGVI >Mature_279_residues MIRTRDVEVGDLSFRLYETGETGAEAVLFLHGSGPGATGLSNWERIIEDLGDRFHCLAPDMIGFGDSAHPVDPPRGMGPF NELRAQALLGLLDVLGLEKVHLVGNSMGGQLALLMVLAQPDRVGKILLMGSGGAPDLPVSPGLAHLRTFYDAPSAESLER LLEQFVFDLEPMRPVIDRVVKERMAYVERADVRRSHAASFDPDGPRRFFTPEELAGIEHDVLVVHGRDDRIIPTQASRWF ADHLPNANLYVIGRCGHWTQIEHPTTFETLLTGLVDGVI
Specific function: Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6- oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. MhpC family [H]
Homologues:
Organism=Escherichia coli, GI87081721, Length=284, Percent_Identity=32.7464788732394, Blast_Score=135, Evalue=4e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.7.1.- [C]
Molecular weight: Translated: 30687; Mature: 30687
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRTRDVEVGDLSFRLYETGETGAEAVLFLHGSGPGATGLSNWERIIEDLGDRFHCLAPD CCCCCCCEECCEEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEECCCC MIGFGDSAHPVDPPRGMGPFNELRAQALLGLLDVLGLEKVHLVGNSMGGQLALLMVLAQP HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEHHHHCCC DRVGKILLMGSGGAPDLPVSPGLAHLRTFYDAPSAESLERLLEQFVFDLEPMRPVIDRVV CCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH KERMAYVERADVRRSHAASFDPDGPRRFFTPEELAGIEHDVLVVHGRDDRIIPTQASRWF HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCHHHHHH ADHLPNANLYVIGRCGHWTQIEHPTTFETLLTGLVDGVI HHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MIRTRDVEVGDLSFRLYETGETGAEAVLFLHGSGPGATGLSNWERIIEDLGDRFHCLAPD CCCCCCCEECCEEEEEEECCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCEEECCCC MIGFGDSAHPVDPPRGMGPFNELRAQALLGLLDVLGLEKVHLVGNSMGGQLALLMVLAQP HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCEEEHHHHCCC DRVGKILLMGSGGAPDLPVSPGLAHLRTFYDAPSAESLERLLEQFVFDLEPMRPVIDRVV CCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHH KERMAYVERADVRRSHAASFDPDGPRRFFTPEELAGIEHDVLVVHGRDDRIIPTQASRWF HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCEEEEECCCCCCCCCHHHHHH ADHLPNANLYVIGRCGHWTQIEHPTTFETLLTGLVDGVI HHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA