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The map label for this gene is ycgM [C]

Identifier: 119714478

GI number: 119714478

Start: 226637

End: 227491

Strand: Direct

Name: ycgM [C]

Synonym: Noca_0211

Alternate gene names: 119714478

Gene position: 226637-227491 (Clockwise)

Preceding gene: 119714477

Following gene: 119714480

Centisome position: 4.55

GC content: 72.87

Gene sequence:

>855_bases
ATGCGGATCGCCAACCACGACGGACGCGCCGTACTCGTGCTGGGCGAGGACAAGGGCGTCGACATCGAGCGCGCCAGCCA
CGGCGAGCTCGGCCCCTCGATCGCCGACCTCTACCCGCGCTGGGACGAGGTCGTGGCGTGGGTGTCCACGCTCGGCGACG
TCGGCGACCTGGTGGCCGACGTCGTCATCGACCCCGACCTGCTGGGCGCGCCGTCGCCGCGGCCCACGCAGGCGATCGCG
ATCGGGCTCAACTACGAGGAGCACGCCCACGAGACCGGCTACCAGGTGCCGACCCAGCTGCCGCCGGTGTTCGCGAAGTT
CGCCAGCAGCATCACCGGGCCGCGCGGCCTCGTCGACCTGCCGCCCGGCGGCCACACCGACTGGGAGGTGGAGGTCGTCG
CGGTCATCGGCCGCACGGCGCACCGCATCTCGCCCGACGAGGCCTGGGGCCACGTCGCCGGCCTCACCGTCGGCCAGGAC
CTCTCGGAGCGGATCTCCCAGATGGCCGGTCCGGCTCCTCAGTTCGGCCTGGCCAAGTCGTTCCCCGGCTTCAGCCCGAT
GGGGCCGTGGCTGGTCACCCCCGAGGAGCTCGCCGATCCCGACGACCTGGCGCTGGGCTGTGCGATCGACGGCGAGACCG
TCCAGGACGGGCGCACCAGCAAGCTGATCTTCTCGATCCCGCGCAGCATCGCCGCCCTGTCGCAGGTGCTCACCCTGCTG
CCCGGCGACGTGGTCTTCACCGGCACCCCCGACGGCGTCGGGCTCGGCCGCTCCCCGCAGCGCTTCCTCCGCCCCGGCGA
GACGCTGCGCACCTGGGTCGAGGGGATCGGCGAGATGGTGCACACCTTCCGCTGA

Upstream 100 bases:

>100_bases
GTGATCGGCCGGTGCGGGCACTGGACCCAGATCGAGCACCCGACGACGTTCGAGACGCTGTTGACCGGTCTCGTCGACGG
CGTGATCTAGGAGTCGCGGG

Downstream 100 bases:

>100_bases
GCGCTGCGCGGGCGCGAGGATCTCGACCAGCTCGAACACCAGTGCCTGCCGTCGGTCGAGCAGCGAGCGCAGCGAGCGTC
GTCGAGACCCCGGCAGCCAA

Product: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase

Products: NA

Alternate protein names: UGL; Ureidoglycolase; Ureidoglycolatase; Ureidoglycolate hydrolase [H]

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MRIANHDGRAVLVLGEDKGVDIERASHGELGPSIADLYPRWDEVVAWVSTLGDVGDLVADVVIDPDLLGAPSPRPTQAIA
IGLNYEEHAHETGYQVPTQLPPVFAKFASSITGPRGLVDLPPGGHTDWEVEVVAVIGRTAHRISPDEAWGHVAGLTVGQD
LSERISQMAGPAPQFGLAKSFPGFSPMGPWLVTPEELADPDDLALGCAIDGETVQDGRTSKLIFSIPRSIAALSQVLTLL
PGDVVFTGTPDGVGLGRSPQRFLRPGETLRTWVEGIGEMVHTFR

Sequences:

>Translated_284_residues
MRIANHDGRAVLVLGEDKGVDIERASHGELGPSIADLYPRWDEVVAWVSTLGDVGDLVADVVIDPDLLGAPSPRPTQAIA
IGLNYEEHAHETGYQVPTQLPPVFAKFASSITGPRGLVDLPPGGHTDWEVEVVAVIGRTAHRISPDEAWGHVAGLTVGQD
LSERISQMAGPAPQFGLAKSFPGFSPMGPWLVTPEELADPDDLALGCAIDGETVQDGRTSKLIFSIPRSIAALSQVLTLL
PGDVVFTGTPDGVGLGRSPQRFLRPGETLRTWVEGIGEMVHTFR
>Mature_284_residues
MRIANHDGRAVLVLGEDKGVDIERASHGELGPSIADLYPRWDEVVAWVSTLGDVGDLVADVVIDPDLLGAPSPRPTQAIA
IGLNYEEHAHETGYQVPTQLPPVFAKFASSITGPRGLVDLPPGGHTDWEVEVVAVIGRTAHRISPDEAWGHVAGLTVGQD
LSERISQMAGPAPQFGLAKSFPGFSPMGPWLVTPEELADPDDLALGCAIDGETVQDGRTSKLIFSIPRSIAALSQVLTLL
PGDVVFTGTPDGVGLGRSPQRFLRPGETLRTWVEGIGEMVHTFR

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI156231349, Length=213, Percent_Identity=43.1924882629108, Blast_Score=181, Evalue=5e-46,
Organism=Homo sapiens, GI40786394, Length=213, Percent_Identity=41.3145539906103, Blast_Score=171, Evalue=1e-42,
Organism=Homo sapiens, GI13654274, Length=180, Percent_Identity=33.3333333333333, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI215422413, Length=180, Percent_Identity=32.7777777777778, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI66348062, Length=180, Percent_Identity=32.7777777777778, Blast_Score=87, Evalue=2e-17,
Organism=Escherichia coli, GI1787428, Length=182, Percent_Identity=32.967032967033, Blast_Score=91, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17557057, Length=182, Percent_Identity=38.4615384615385, Blast_Score=106, Evalue=1e-23,
Organism=Saccharomyces cerevisiae, GI6324161, Length=215, Percent_Identity=26.5116279069767, Blast_Score=73, Evalue=5e-14,
Organism=Drosophila melanogaster, GI28572127, Length=214, Percent_Identity=37.3831775700935, Blast_Score=152, Evalue=2e-37,
Organism=Drosophila melanogaster, GI24663695, Length=282, Percent_Identity=32.2695035460993, Blast_Score=129, Evalue=2e-30,
Organism=Drosophila melanogaster, GI28571789, Length=181, Percent_Identity=31.4917127071823, Blast_Score=79, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: =4.3.2.3 [H]

Molecular weight: Translated: 30237; Mature: 30237

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIANHDGRAVLVLGEDKGVDIERASHGELGPSIADLYPRWDEVVAWVSTLGDVGDLVAD
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VVIDPDLLGAPSPRPTQAIAIGLNYEEHAHETGYQVPTQLPPVFAKFASSITGPRGLVDL
HHCCCHHCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEC
PPGGHTDWEVEVVAVIGRTAHRISPDEAWGHVAGLTVGQDLSERISQMAGPAPQFGLAKS
CCCCCCCCEEEEEEEECCHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHC
FPGFSPMGPWLVTPEELADPDDLALGCAIDGETVQDGRTSKLIFSIPRSIAALSQVLTLL
CCCCCCCCCEEECHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
PGDVVFTGTPDGVGLGRSPQRFLRPGETLRTWVEGIGEMVHTFR
CCCEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRIANHDGRAVLVLGEDKGVDIERASHGELGPSIADLYPRWDEVVAWVSTLGDVGDLVAD
CCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHH
VVIDPDLLGAPSPRPTQAIAIGLNYEEHAHETGYQVPTQLPPVFAKFASSITGPRGLVDL
HHCCCHHCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCEEEC
PPGGHTDWEVEVVAVIGRTAHRISPDEAWGHVAGLTVGQDLSERISQMAGPAPQFGLAKS
CCCCCCCCEEEEEEEECCHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHC
FPGFSPMGPWLVTPEELADPDDLALGCAIDGETVQDGRTSKLIFSIPRSIAALSQVLTLL
CCCCCCCCCEEECHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC
PGDVVFTGTPDGVGLGRSPQRFLRPGETLRTWVEGIGEMVHTFR
CCCEEEECCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA