Click here to switch to the map view.

The map label for this gene is 119714476

Identifier: 119714476

GI number: 119714476

Start: 224615

End: 225790

Strand: Direct

Name: 119714476

Synonym: Noca_0209

Alternate gene names: NA

Gene position: 224615-225790 (Clockwise)

Preceding gene: 119714475

Following gene: 119714477

Centisome position: 4.51

GC content: 72.87

Gene sequence:

>1176_bases
ATGACCCTTGCCGAGAAGGCGCGCGCCGCCGCGCCCGTCCTCGCCGCCAGCGACGCCGAGAGCGGTGCCCGCGGTCGCCT
CACCGAGGAGGCCTGGGCGGCCCTGCAGTCCATCGGCGTGATGCGTGCGCTCCAGCCGGCCCGCTGGGGCGGCGGGGAGA
CCGACCTGGTCGAGTACGTCGACGCCATCATCGAGATCGGCCGGCACTCCGCCTCGGCCGGCTGGGTCGCCTCGGTCGTC
GGCGTGCACCCCTGGCAGATCGCGCTGTTCCCCGACGAGACGCAGACCGAGATCTGGGGGGCCACCCCGGACCGGGCGAT
CGCGTCGTCGTACACGCCGACGGGCTCGATCGAGAAGATCGCGGGCGGCTACCGGGTCTCCGGACGCTGGTCGTTCTCCT
CGGGCATCGACTGGTGCGAGGGCGTGATCCTCGGCGGCATCGCCGGCACCCGCGAGATCGACGGTGTCGAACATCCGGAC
TTCACCGCGGTGATCCTGGACCGGGCGGACTTCACCGTCGAGCGGACCTGGGACGTCGCCGGGCTGCGCGGCACCGGCAG
CAACGACGTGGTGGTCGACGGCGTGGTCGTGCCCGAGCGGCGCGGGCAGTCGCACCTCTTCTACACGCACGGGCTCGGCA
CGCCGCTGCCCGGGCAGGAGCTCAACGACGGGCCGCTGTACCGGGTGCCCTGGGCGGGGCTGTTCAACCTGATCATCGCC
GCCGGGACGGTCGGTGCCGTGCAGGGCTTCGTGGACGCGTGGATCGCCGAGACCCGGACGCGTCGTACCAACTACGGCCA
GATGCTGCGCGAGGAGGGCGTGGTGCAGAAGCACCTCGCCAACGCGGAGTGGCTGCTCGACGCCGCCCGGCTCAAGGTGC
GCCGGGCCGCCGTCGAGCTGATGGCGCACGCCGAGGCCCGCGAGGTGCCGACCAAGGAGCAGCGCGCCTACTACCGCTGG
GACGTCGCCAAGGCCGCCAACGCCGCGACCGACGCCGCCCAGGAGCTCATGCGGGTAGCCAGCGGACGCTCGGCGTTCCT
CGACCACCCGCTGCAGGCGAAGTACCAGGACGTCGTCTCCGCGAGCAGCCACGCGTTCCTCTACGCCGACCCGCTGGCGC
GGGCCTGGGCGGGCCGGCACCTCGGTGCCGAGAACCTGGTCGAGGTGCACCTGTGA

Upstream 100 bases:

>100_bases
CCCAGGTCGAGCAGCCCGACCGGTTCCGCACGATCCTGCGTGACTTCGCCGACGGCCGGCTCTGACCGTCCCCCACCTGA
CCCCGAACGGGAGCTTCGTC

Downstream 100 bases:

>100_bases
TCCGCACCCGCGACGTCGAGGTCGGCGACCTGTCCTTCCGGCTCTACGAGACCGGCGAGACCGGGGCCGAGGCCGTGCTG
TTCCTGCACGGCTCGGGCCC

Product: acyl-CoA dehydrogenase type 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MTLAEKARAAAPVLAASDAESGARGRLTEEAWAALQSIGVMRALQPARWGGGETDLVEYVDAIIEIGRHSASAGWVASVV
GVHPWQIALFPDETQTEIWGATPDRAIASSYTPTGSIEKIAGGYRVSGRWSFSSGIDWCEGVILGGIAGTREIDGVEHPD
FTAVILDRADFTVERTWDVAGLRGTGSNDVVVDGVVVPERRGQSHLFYTHGLGTPLPGQELNDGPLYRVPWAGLFNLIIA
AGTVGAVQGFVDAWIAETRTRRTNYGQMLREEGVVQKHLANAEWLLDAARLKVRRAAVELMAHAEAREVPTKEQRAYYRW
DVAKAANAATDAAQELMRVASGRSAFLDHPLQAKYQDVVSASSHAFLYADPLARAWAGRHLGAENLVEVHL

Sequences:

>Translated_391_residues
MTLAEKARAAAPVLAASDAESGARGRLTEEAWAALQSIGVMRALQPARWGGGETDLVEYVDAIIEIGRHSASAGWVASVV
GVHPWQIALFPDETQTEIWGATPDRAIASSYTPTGSIEKIAGGYRVSGRWSFSSGIDWCEGVILGGIAGTREIDGVEHPD
FTAVILDRADFTVERTWDVAGLRGTGSNDVVVDGVVVPERRGQSHLFYTHGLGTPLPGQELNDGPLYRVPWAGLFNLIIA
AGTVGAVQGFVDAWIAETRTRRTNYGQMLREEGVVQKHLANAEWLLDAARLKVRRAAVELMAHAEAREVPTKEQRAYYRW
DVAKAANAATDAAQELMRVASGRSAFLDHPLQAKYQDVVSASSHAFLYADPLARAWAGRHLGAENLVEVHL
>Mature_390_residues
TLAEKARAAAPVLAASDAESGARGRLTEEAWAALQSIGVMRALQPARWGGGETDLVEYVDAIIEIGRHSASAGWVASVVG
VHPWQIALFPDETQTEIWGATPDRAIASSYTPTGSIEKIAGGYRVSGRWSFSSGIDWCEGVILGGIAGTREIDGVEHPDF
TAVILDRADFTVERTWDVAGLRGTGSNDVVVDGVVVPERRGQSHLFYTHGLGTPLPGQELNDGPLYRVPWAGLFNLIIAA
GTVGAVQGFVDAWIAETRTRRTNYGQMLREEGVVQKHLANAEWLLDAARLKVRRAAVELMAHAEAREVPTKEQRAYYRWD
VAKAANAATDAAQELMRVASGRSAFLDHPLQAKYQDVVSASSHAFLYADPLARAWAGRHLGAENLVEVHL

Specific function: Involved in pigment production acting as an hydroxylase that transforms indole to indoxyl, resulting in the formation of indigo [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013107
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF08028 Acyl-CoA_dh_2 [H]

EC number: NA

Molecular weight: Translated: 42269; Mature: 42138

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLAEKARAAAPVLAASDAESGARGRLTEEAWAALQSIGVMRALQPARWGGGETDLVEYV
CCCHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
DAIIEIGRHSASAGWVASVVGVHPWQIALFPDETQTEIWGATPDRAIASSYTPTGSIEKI
HHHHHHHCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCHHHH
AGGYRVSGRWSFSSGIDWCEGVILGGIAGTREIDGVEHPDFTAVILDRADFTVERTWDVA
CCCEEEEEEECCCCCCHHHHHHEECCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECC
GLRGTGSNDVVVDGVVVPERRGQSHLFYTHGLGTPLPGQELNDGPLYRVPWAGLFNLIIA
CCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECHHHHHHHHHH
AGTVGAVQGFVDAWIAETRTRRTNYGQMLREEGVVQKHLANAEWLLDAARLKVRRAAVEL
HCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHH
MAHAEAREVPTKEQRAYYRWDVAKAANAATDAAQELMRVASGRSAFLDHPLQAKYQDVVS
HHHHHHHCCCCHHHHHHHEEHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHC
ASSHAFLYADPLARAWAGRHLGAENLVEVHL
CCCCEEEEECHHHHHHHCCCCCCCCEEEECC
>Mature Secondary Structure 
TLAEKARAAAPVLAASDAESGARGRLTEEAWAALQSIGVMRALQPARWGGGETDLVEYV
CCHHHHHHHCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
DAIIEIGRHSASAGWVASVVGVHPWQIALFPDETQTEIWGATPDRAIASSYTPTGSIEKI
HHHHHHHCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCCCCCHHHHCCCCCCCCHHHH
AGGYRVSGRWSFSSGIDWCEGVILGGIAGTREIDGVEHPDFTAVILDRADFTVERTWDVA
CCCEEEEEEECCCCCCHHHHHHEECCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECC
GLRGTGSNDVVVDGVVVPERRGQSHLFYTHGLGTPLPGQELNDGPLYRVPWAGLFNLIIA
CCCCCCCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECHHHHHHHHHH
AGTVGAVQGFVDAWIAETRTRRTNYGQMLREEGVVQKHLANAEWLLDAARLKVRRAAVEL
HCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHHHHHHHH
MAHAEAREVPTKEQRAYYRWDVAKAANAATDAAQELMRVASGRSAFLDHPLQAKYQDVVS
HHHHHHHCCCCHHHHHHHEEHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHC
ASSHAFLYADPLARAWAGRHLGAENLVEVHL
CCCCEEEEECHHHHHHHCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9251216 [H]