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The map label for this gene is ycdL [C]

Identifier: 119714468

GI number: 119714468

Start: 216394

End: 216990

Strand: Reverse

Name: ycdL [C]

Synonym: Noca_0201

Alternate gene names: 119714468

Gene position: 216990-216394 (Counterclockwise)

Preceding gene: 119714469

Following gene: 119714467

Centisome position: 4.35

GC content: 72.53

Gene sequence:

>597_bases
ATGACCGACAACCGCAAGGCCCTCCTGCTCCTGGACTACCAGGTCGCGCTGTGCGAGGAGGGCCCGCACCTGCGGATGCC
CCCGCTGGCCGCGCAGGTCGCCGAGCGCGACGTGCTCGCGACCGCCGAGCGCGTGCTGGGCGCCGCCCGCGACGCCGGCT
GGCTGGTCGTGCACGTCCGGCTCGCGTTCGACCCGACGTACCGGCTGCGCACCAACCGGCTGGCCCGGTTCGACGTCTAC
CCCGACCAGGGCGCGATGCTCGCCGACTCCCCGGAGGCCCAGATCGTCAAGGCGCTGGCCCCGATCGAGGGCGAGCCGGT
GGTGGACAAGGGCTGCGTCGACCCGTTCGTCGGCACCCCGCTGCTGCAGGTGCTGGCTGCCGAGGGCGTCGGCGAGGTCG
TGCTCGGCGGCGTCGCGACCAACCTGGTCGTCGAGTCGGCCGCCCGGCACGCCAGCGACGCGGGGCTCCAGGTCACGGTC
GTCGAGGACATGTGCGCGTCGTTCCGTCCGGACTTCCACGAGTTCTCGGTGCAGAACATGCTGCCGCTGTTCGCGACGGT
GACCTCTGCGAACGAGCTGATCGGCGGGCTGTCGTGA

Upstream 100 bases:

>100_bases
CTGGCCTCACCGGCCTCGTCGTACGTCACCGGCCAGGTGGTCTACGTCGACGGCGGCTGGTCGGCCTGGTGACCACATCC
CCGACGACGAAGGAACCCCG

Downstream 100 bases:

>100_bases
GCGCCCCCGTGGCGGAGTACGACGTCGTCGTGGTCGGCGGCGGGGTCGCCGGCCTGTCCGCGGCCTGCGCTGCCGCCGAG
GCCGGCGCGCGGGTGGTGCT

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase Hydrolase Family Protein

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MTDNRKALLLLDYQVALCEEGPHLRMPPLAAQVAERDVLATAERVLGAARDAGWLVVHVRLAFDPTYRLRTNRLARFDVY
PDQGAMLADSPEAQIVKALAPIEGEPVVDKGCVDPFVGTPLLQVLAAEGVGEVVLGGVATNLVVESAARHASDAGLQVTV
VEDMCASFRPDFHEFSVQNMLPLFATVTSANELIGGLS

Sequences:

>Translated_198_residues
MTDNRKALLLLDYQVALCEEGPHLRMPPLAAQVAERDVLATAERVLGAARDAGWLVVHVRLAFDPTYRLRTNRLARFDVY
PDQGAMLADSPEAQIVKALAPIEGEPVVDKGCVDPFVGTPLLQVLAAEGVGEVVLGGVATNLVVESAARHASDAGLQVTV
VEDMCASFRPDFHEFSVQNMLPLFATVTSANELIGGLS
>Mature_197_residues
TDNRKALLLLDYQVALCEEGPHLRMPPLAAQVAERDVLATAERVLGAARDAGWLVVHVRLAFDPTYRLRTNRLARFDVYP
DQGAMLADSPEAQIVKALAPIEGEPVVDKGCVDPFVGTPLLQVLAAEGVGEVVLGGVATNLVVESAARHASDAGLQVTVV
EDMCASFRPDFHEFSVQNMLPLFATVTSANELIGGLS

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081820, Length=208, Percent_Identity=27.8846153846154, Blast_Score=64, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21189; Mature: 21057

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDNRKALLLLDYQVALCEEGPHLRMPPLAAQVAERDVLATAERVLGAARDAGWLVVHVR
CCCCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
LAFDPTYRLRTNRLARFDVYPDQGAMLADSPEAQIVKALAPIEGEPVVDKGCVDPFVGTP
EEECCCEEECCCCEEEEECCCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
LLQVLAAEGVGEVVLGGVATNLVVESAARHASDAGLQVTVVEDMCASFRPDFHEFSVQNM
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCHHHHHHHHH
LPLFATVTSANELIGGLS
HHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TDNRKALLLLDYQVALCEEGPHLRMPPLAAQVAERDVLATAERVLGAARDAGWLVVHVR
CCCCCEEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEE
LAFDPTYRLRTNRLARFDVYPDQGAMLADSPEAQIVKALAPIEGEPVVDKGCVDPFVGTP
EEECCCEEECCCCEEEEECCCCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHH
LLQVLAAEGVGEVVLGGVATNLVVESAARHASDAGLQVTVVEDMCASFRPDFHEFSVQNM
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHCCCHHHHHHHHH
LPLFATVTSANELIGGLS
HHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA