| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714445
Identifier: 119714445
GI number: 119714445
Start: 190923
End: 191534
Strand: Direct
Name: 119714445
Synonym: Noca_0178
Alternate gene names: NA
Gene position: 190923-191534 (Clockwise)
Preceding gene: 119714444
Following gene: 119714450
Centisome position: 3.83
GC content: 76.63
Gene sequence:
>612_bases ATGGACGCCGTGCCCGTGCCCGTTCCTGGGTCTGTGACCCGCCTGCCCCGGCTCCTGCTGGCCGCCCTGCTGCTCGCCGG CGGCGGTGTCGTCGCGACCGGCGCCATGGCGGCCCCCGCCCTCGCCTGCCCGGCGTCTCGGACCGGTCTGGATCAGCTGA CGATGCAGGCCGACGACGTCTTCACCGGCGCCGTCGAGGACCGGGCCCGGCAGGGCCGCACGATCGTCTACACGGTCACC GTCGACCGGGTCTACAAGGGCGACCTCGACGGCACCGAGGCCACCGTCACGACCCCGGCCCGGGCGCGGGCCTGTGGGCT GCCGGACCTGCGCACCGGCACCGACTACGTCTTCTTCACCCAGGGTGCCGACCTCGAGACCACGAGCACCGCCGGGACCG CGCCCGCGGCCGCCACCCTGCTGCGTCGCGTGGAGCGGCTGCTCGGCGAGGGTCACCCCGCGACGCCGCCGACGCCGCCC GAGGCGACCTTCACGCTGGTCGGCGAGCAGCCCACCAGCTTCGAGCGGGTCGCCGCGCCCGGCGCGGCCCTCGTCATCGC CGGCCTGCTGGGCCTGCTGCTCGTCGCCGGCCTGAGCCGCCGCCGGGCCTAG
Upstream 100 bases:
>100_bases CCCGACGGTCACTGCGGCGGCCGACCACGTCGCGCCGGGACACGACGAGGACGGCGTGGCCCGGGTCCTGGCTGGTGTGT TCGACCTGTGATCTGTTGAG
Downstream 100 bases:
>100_bases CTAGGAGGTCTCCGGAAGGTCGTCCGGAGGGTGTCACCGCTGGCTCCGTCCGGATGACGTCCCGCGCAGACCCGCCGGCC GGTCGGGCTCGGACCCCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 203; Mature: 203
Protein sequence:
>203_residues MDAVPVPVPGSVTRLPRLLLAALLLAGGGVVATGAMAAPALACPASRTGLDQLTMQADDVFTGAVEDRARQGRTIVYTVT VDRVYKGDLDGTEATVTTPARARACGLPDLRTGTDYVFFTQGADLETTSTAGTAPAAATLLRRVERLLGEGHPATPPTPP EATFTLVGEQPTSFERVAAPGAALVIAGLLGLLLVAGLSRRRA
Sequences:
>Translated_203_residues MDAVPVPVPGSVTRLPRLLLAALLLAGGGVVATGAMAAPALACPASRTGLDQLTMQADDVFTGAVEDRARQGRTIVYTVT VDRVYKGDLDGTEATVTTPARARACGLPDLRTGTDYVFFTQGADLETTSTAGTAPAAATLLRRVERLLGEGHPATPPTPP EATFTLVGEQPTSFERVAAPGAALVIAGLLGLLLVAGLSRRRA >Mature_203_residues MDAVPVPVPGSVTRLPRLLLAALLLAGGGVVATGAMAAPALACPASRTGLDQLTMQADDVFTGAVEDRARQGRTIVYTVT VDRVYKGDLDGTEATVTTPARARACGLPDLRTGTDYVFFTQGADLETTSTAGTAPAAATLLRRVERLLGEGHPATPPTPP EATFTLVGEQPTSFERVAAPGAALVIAGLLGLLLVAGLSRRRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20816; Mature: 20816
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAVPVPVPGSVTRLPRLLLAALLLAGGGVVATGAMAAPALACPASRTGLDQLTMQADDV CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCHHHCCHHHCCCCCCCHHHHHHHHHHH FTGAVEDRARQGRTIVYTVTVDRVYKGDLDGTEATVTTPARARACGLPDLRTGTDYVFFT HHHHHHHHHHCCCEEEEEEEECEEEECCCCCCCEEEECCHHHHHCCCCCCCCCCCEEEEE QGADLETTSTAGTAPAAATLLRRVERLLGEGHPATPPTPPEATFTLVGEQPTSFERVAAP CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHCC GAALVIAGLLGLLLVAGLSRRRA CHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MDAVPVPVPGSVTRLPRLLLAALLLAGGGVVATGAMAAPALACPASRTGLDQLTMQADDV CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEECCHHHCCHHHCCCCCCCHHHHHHHHHHH FTGAVEDRARQGRTIVYTVTVDRVYKGDLDGTEATVTTPARARACGLPDLRTGTDYVFFT HHHHHHHHHHCCCEEEEEEEECEEEECCCCCCCEEEECCHHHHHCCCCCCCCCCCEEEEE QGADLETTSTAGTAPAAATLLRRVERLLGEGHPATPPTPPEATFTLVGEQPTSFERVAAP CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCHHHHHCC GAALVIAGLLGLLLVAGLSRRRA CHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA