| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714385
Identifier: 119714385
GI number: 119714385
Start: 131399
End: 132259
Strand: Reverse
Name: 119714385
Synonym: Noca_0118
Alternate gene names: NA
Gene position: 132259-131399 (Counterclockwise)
Preceding gene: 119714394
Following gene: 119714383
Centisome position: 2.65
GC content: 72.24
Gene sequence:
>861_bases GTGACCGAACCCGCCGACGTGCGCCTGGCCGTGCTCATCGACGCCGACAACGTGTCCGCCTCGCACGCGGCGGACCTGCT CGCCGAGCTGGCGCGCTACGGCGTCCCCACCGTCAAGCGGGCGTACGGCGACTGGACGACCCAACAGCTGGCCGGCTGGA AGTCCGAGCTGGCCCGCCACGCGATCCAGCCGATCCAGCAGTTCGCGAACACGGTCGGCAAGAACTCCACCGACTCCGCG TTGATCATCGACGCGATGGACCTGCTCTACTCCGGCCACCTCGACGCGTTCGCGATCGTCTCGAGCGACAGCGACTTCAC CCGGCTCGCGACCCGGCTGCGGGAGTCGGGCAAGACCGTCTACGGCCTGGGGCGCCGGCGTACGCCGGCCTCGCTGCAGG CGGCCTGCGACAAGTTCATCTTCCTCGAGGTGCTGCGCGACGGCGAAGGAGGCGGCGCCGACCAGGCGCACCAGAAGGAG GCGGCCCCCGGGTCCGAGCACGAGGCCGACGCCGACGCCGAGGCCGACTCGCTGCCGGACCTGCGCACGATCCTGGAGGC CGCGGTGCGCAGCACCGCGCAGGACGACGGCTGGTCCGCGCTCGGGTCGGTCGGCAGCTACCTGGGCAAGACCCACGCGG CGTTCGACCCGCGCCACTACGGGTTCCCGCGGCTCAGTGCGCTCGCCGGTGCGCAGCCCTACCTCGACCTCGACCATCCC GACGGCGGCCAGCCGCGGGTCCGGCTGCGCAGCCAACGGCCACCGCGCAAGCGGGCGGCCGCCAAGAAGGCCGGCTCACA GAACGAACCGGCGAAGAAGACGACGAAGAAGGGTGCGGCGCGGGACTCAGCGACCGAGTAG
Upstream 100 bases:
>100_bases GTCGAGATGACGCGACATCGACAGCTGGGTGGGCACCTGCCGAGCGTGACACCTGGCGCGCCGGGAGGCACCTGCTTTAC GGCGGTGGTAGGAGTGGGTG
Downstream 100 bases:
>100_bases CGCGCGGTACTTCTCCCGGTCGGTGCTCATCTGCCAGCCCGGGTCGTCGGCGGGCGGGGTCCAGCCCCAGTCGTCGTCCA TCTCGAAGGGCAGCTTGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTEPADVRLAVLIDADNVSASHAADLLAELARYGVPTVKRAYGDWTTQQLAGWKSELARHAIQPIQQFANTVGKNSTDSA LIIDAMDLLYSGHLDAFAIVSSDSDFTRLATRLRESGKTVYGLGRRRTPASLQAACDKFIFLEVLRDGEGGGADQAHQKE AAPGSEHEADADAEADSLPDLRTILEAAVRSTAQDDGWSALGSVGSYLGKTHAAFDPRHYGFPRLSALAGAQPYLDLDHP DGGQPRVRLRSQRPPRKRAAAKKAGSQNEPAKKTTKKGAARDSATE
Sequences:
>Translated_286_residues MTEPADVRLAVLIDADNVSASHAADLLAELARYGVPTVKRAYGDWTTQQLAGWKSELARHAIQPIQQFANTVGKNSTDSA LIIDAMDLLYSGHLDAFAIVSSDSDFTRLATRLRESGKTVYGLGRRRTPASLQAACDKFIFLEVLRDGEGGGADQAHQKE AAPGSEHEADADAEADSLPDLRTILEAAVRSTAQDDGWSALGSVGSYLGKTHAAFDPRHYGFPRLSALAGAQPYLDLDHP DGGQPRVRLRSQRPPRKRAAAKKAGSQNEPAKKTTKKGAARDSATE >Mature_285_residues TEPADVRLAVLIDADNVSASHAADLLAELARYGVPTVKRAYGDWTTQQLAGWKSELARHAIQPIQQFANTVGKNSTDSAL IIDAMDLLYSGHLDAFAIVSSDSDFTRLATRLRESGKTVYGLGRRRTPASLQAACDKFIFLEVLRDGEGGGADQAHQKEA APGSEHEADADAEADSLPDLRTILEAAVRSTAQDDGWSALGSVGSYLGKTHAAFDPRHYGFPRLSALAGAQPYLDLDHPD GGQPRVRLRSQRPPRKRAAAKKAGSQNEPAKKTTKKGAARDSATE
Specific function: Unknown
COG id: COG1432
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30658; Mature: 30527
Theoretical pI: Translated: 6.97; Mature: 6.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPADVRLAVLIDADNVSASHAADLLAELARYGVPTVKRAYGDWTTQQLAGWKSELARH CCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHH AIQPIQQFANTVGKNSTDSALIIDAMDLLYSGHLDAFAIVSSDSDFTRLATRLRESGKTV HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCEE YGLGRRRTPASLQAACDKFIFLEVLRDGEGGGADQAHQKEAAPGSEHEADADAEADSLPD EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHH LRTILEAAVRSTAQDDGWSALGSVGSYLGKTHAAFDPRHYGFPRLSALAGAQPYLDLDHP HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEECCCC DGGQPRVRLRSQRPPRKRAAAKKAGSQNEPAKKTTKKGAARDSATE CCCCCCEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCC >Mature Secondary Structure TEPADVRLAVLIDADNVSASHAADLLAELARYGVPTVKRAYGDWTTQQLAGWKSELARH CCCCCEEEEEEEECCCCCHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHH AIQPIQQFANTVGKNSTDSALIIDAMDLLYSGHLDAFAIVSSDSDFTRLATRLRESGKTV HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCEE YGLGRRRTPASLQAACDKFIFLEVLRDGEGGGADQAHQKEAAPGSEHEADADAEADSLPD EECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCHH LRTILEAAVRSTAQDDGWSALGSVGSYLGKTHAAFDPRHYGFPRLSALAGAQPYLDLDHP HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCEECCCC DGGQPRVRLRSQRPPRKRAAAKKAGSQNEPAKKTTKKGAARDSATE CCCCCCEEECCCCCCHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA