Definition Nocardioides sp. JS614 chromosome, complete genome.
Accession NC_008699
Length 4,985,871

Click here to switch to the map view.

The map label for this gene is 119714378

Identifier: 119714378

GI number: 119714378

Start: 124963

End: 125349

Strand: Reverse

Name: 119714378

Synonym: Noca_0111

Alternate gene names: NA

Gene position: 125349-124963 (Counterclockwise)

Preceding gene: 119714381

Following gene: 119714375

Centisome position: 2.51

GC content: 73.39

Gene sequence:

>387_bases
ATGGGTGGCCACTACCCAGATCCTCAGCCGCGGATGTGCTCCCGGACGCCGCTCCGGCGGCGCGATGTCGTCCAGGCCAC
ACCCCCGCCGAGGTTTCGGCAGGGGCGCCGCGGGAAACGAGACCCGCAGACCGCACCCACCGGAGGACCCATGACGATCA
CCGCGCTGCTGATGGCAGGCCTGATGGCCTTCGTGCTGCTGGTGCCCACCCTGATGGTCGCGATCCTCGTGTCCGGCATC
GCCCGTCGCCCCGAGCCTGCCGAGGCCGCCCCGGTGACTGGGCAGGCCACTGGGCCGGTCACTGGGCCGGTCGCCGTTCC
GGTGGCCGTCCCCGTCGGTGCACGGGCCACCGTGACGCGGCCGACCGTCGAGCTCCGGGCCTCCTGA

Upstream 100 bases:

>100_bases
CAGCTCGGCGACCAGGCGGGGATCGGTGAGGGCCGACCAGATCCGGTCGCGCGGTGCGTCCACGACCGCCTCGGCACGCG
TGTCTGCGGAGAACGAGGTC

Downstream 100 bases:

>100_bases
GCTCCGGGCTTCCTGAGCGCCGGCCCCTCAGCCGATCATCCGGGCCTTGACCTGGGCCGCCTGCTGGTGGCCGACCGCGT
TGTGGTGCCCGTCGAGCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MGGHYPDPQPRMCSRTPLRRRDVVQATPPPRFRQGRRGKRDPQTAPTGGPMTITALLMAGLMAFVLLVPTLMVAILVSGI
ARRPEPAEAAPVTGQATGPVTGPVAVPVAVPVGARATVTRPTVELRAS

Sequences:

>Translated_128_residues
MGGHYPDPQPRMCSRTPLRRRDVVQATPPPRFRQGRRGKRDPQTAPTGGPMTITALLMAGLMAFVLLVPTLMVAILVSGI
ARRPEPAEAAPVTGQATGPVTGPVAVPVAVPVGARATVTRPTVELRAS
>Mature_127_residues
GGHYPDPQPRMCSRTPLRRRDVVQATPPPRFRQGRRGKRDPQTAPTGGPMTITALLMAGLMAFVLLVPTLMVAILVSGIA
RRPEPAEAAPVTGQATGPVTGPVAVPVAVPVGARATVTRPTVELRAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13435; Mature: 13304

Theoretical pI: Translated: 12.33; Mature: 12.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGHYPDPQPRMCSRTPLRRRDVVQATPPPRFRQGRRGKRDPQTAPTGGPMTITALLMAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
LMAFVLLVPTLMVAILVSGIARRPEPAEAAPVTGQATGPVTGPVAVPVAVPVGARATVTR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEECC
PTVELRAS
CCEEEECC
>Mature Secondary Structure 
GGHYPDPQPRMCSRTPLRRRDVVQATPPPRFRQGRRGKRDPQTAPTGGPMTITALLMAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHH
LMAFVLLVPTLMVAILVSGIARRPEPAEAAPVTGQATGPVTGPVAVPVAVPVGARATVTR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEECC
PTVELRAS
CCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA