| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is actII-3 [H]
Identifier: 119714381
GI number: 119714381
Start: 127444
End: 129465
Strand: Reverse
Name: actII-3 [H]
Synonym: Noca_0114
Alternate gene names: 119714381
Gene position: 129465-127444 (Counterclockwise)
Preceding gene: 119714383
Following gene: 119714378
Centisome position: 2.6
GC content: 75.42
Gene sequence:
>2022_bases ATGCCACGGATCCTCACGGAGGCCCACATGACCTCGCTGATCACCGGCCGGCGCAGCGCCTGGGTGCTCGCCCTCGTGCC ATTCTTCCTGGCCCTGGTCCTGATCGGCGCCGTCGGTGAGGGCGACCGCGCGTCGCGCAGCACCGATGCCCTGCCCGCCG GGCTGGACAGCACCGAGGGGACCGCGCTCCTGGACCGGCTCCCCGAAGCCGCGTCGAGCGCCGCGATCGTGCTGTTCACG GCCGATCGCGGTGAGCTCTCCCGCGACCAGCTGGCCGCGCTGCGGGACGCGGGAGCGGGTCTGGCCGATGGCGGCAGCCC CCTGGTGCTCGCCGAGGACGGCACCGCTGCCCTGCTCGCCGTGCCGGTCCCGGCCGGCTCGGCCGGCGAGGTGGCCGACC GGGTGAGCGCGCTGCGCGCCGCCGCCGACGACGCCGCGCCTGACGGCGTGCAGGCCCAGGTCACCGGCCCGGCCGCGGTC CAGGCCGACCTCGCCGCGGTCTTCGACGGGGCGAACACCCGCTTGCTGCTGGTCACCGCGCTCGTGGTCGCCGTGCTGCT CGTGATCACCTACCGCAGCCCCGTGCTGTGGCTGGTCCCGCTGGTCGTCGTGGGCGTCGCCGATCGGCTCGCCGCGGTCC TGGCGACCCAGGTGATGGCCCGCGTCGACGTCGCGTGGGACGAGTCCACGGTCGGGATCCTCTCGGTGCTGGTCTTCGGC ACCGGCACCGACTACGCGCTGCTGCTGATCTCCCGCTACCGCGACGAGCTGCGCACCGAGCCGTCGCGGCGCCGGGCGAT GGCGCACGCGCTGCGGCGTACGGCGGAGGCGGTGCTGGCCAGCGCGACCACCGTCGTCCTGGGGCTGCTGACCCTGCTGC TCTCGCTGACCCCGACCACCCGCGGCCTCGGCCTCGCGTGCGCGGTCGGCGTCGTGGTCGCCGCTGCGTTCGCGCTGGTG GTGCTCCCGGCGGCGCTCGTGCTGTTCGGGCGCTGGGTGTTCTGGCCGCGGGTGCCGCACGTCGGTGAGGCGGTCACGGT CGAGGCCGACACCGTGTGGCACCGGATCGGGGCGCGGGTGGCGCGCCGGCCGGCCCTGGTGGCCGGCGGCTCCCTGGTGC TGCTCGCCCTGATGGCGACCGGGATCGGGCGGATCCACCTCGGCCTGGACCAGGCCGAGCAGTTCCTCGACGAGCCGGAG GCGATCAGCGCCGCCACCCGGCTGGCCGAGTCCTTCCCCGCCGGCACCGCCGACCCGACCCAGGTCGTCACCGAGGGCTC CGGCGACGCCGTGCTCCGGGCGGTCCGCTCGGTCGACGGCGTGACCTCGGCCCGGGTCTCGGCCACCGGCGGCGGCGTGG TCGTGGTCGACGCGGTGCTGTCCGGCCGCTCCGGGGAGAACGCCGACGTCGTGACCGCACTGCGCGAGGCGGTCGCGCCG TACGACGCGCACGTGACCGGCGCCGAGGCGAAGGCCCTCGACGAGCGCGAGGGGTCGGACCGCGACCTGCGGCTGATCGT GCCGCTGATCCTGGTGCTGGTGCTCGGCGGGCTGGTGGTGCTGCTGCGCTCCGTCGTCGCGCCGCTGCTGCTCGTGGTGA CCGTGGTCGCGACGTACGCCGCGGCGATGGGCGCCTCGTGGTGGCTGTTCACGGGGCCGCTCGGGTTCGGCGCGATGGAC AGCGGCGTGCCGCTGTTCGCGTTCCTGTTCCTCGTCGCGCTCGGCGTCGACTACAACATCTTCCTGGTCACCCGCGCCCG TGAGGAGGCCGCCGGCCACGGGTCGCGCGGCGGCATGCTGCGGGCGCTGTCGGCGACCGGCGGGGTGATCACCAGTGCTG GCATCCTGCTCGCGGCGGTGTTCGCGGTGCTGGGGGTGCTGCCGCTGGTGGTGCTCGCCCAGCTCGGCACGATCATCTGC CTGGGCGTGCTGCTCGACACGCTCCTGGTCCGCACCCTGGTGGTGCCGGCGCTCGCCCTGGTCCTCGGCGACCGGTTCTG GTGGCCGCGCCGGGTCGCCTGA
Upstream 100 bases:
>100_bases GACGCCAGGCATCGGCGAACTCGCTCGCCGGGCCGGCCCGCTCGGGCTTCGCCATTTTTTTCATTCACCTACTTGATGTC TAATCTAGTTAGCGACCACC
Downstream 100 bases:
>100_bases CCGGGTCGCCCGGCCGGTCCGTTCAGACGCCGCGGACCGCGGCCGCGACCTTGCGCTGCACGTCGGGGTGGAAGACGGTC GGGATGATGAACGCCGGGTT
Product: MMPL domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 673; Mature: 672
Protein sequence:
>673_residues MPRILTEAHMTSLITGRRSAWVLALVPFFLALVLIGAVGEGDRASRSTDALPAGLDSTEGTALLDRLPEAASSAAIVLFT ADRGELSRDQLAALRDAGAGLADGGSPLVLAEDGTAALLAVPVPAGSAGEVADRVSALRAAADDAAPDGVQAQVTGPAAV QADLAAVFDGANTRLLLVTALVVAVLLVITYRSPVLWLVPLVVVGVADRLAAVLATQVMARVDVAWDESTVGILSVLVFG TGTDYALLLISRYRDELRTEPSRRRAMAHALRRTAEAVLASATTVVLGLLTLLLSLTPTTRGLGLACAVGVVVAAAFALV VLPAALVLFGRWVFWPRVPHVGEAVTVEADTVWHRIGARVARRPALVAGGSLVLLALMATGIGRIHLGLDQAEQFLDEPE AISAATRLAESFPAGTADPTQVVTEGSGDAVLRAVRSVDGVTSARVSATGGGVVVVDAVLSGRSGENADVVTALREAVAP YDAHVTGAEAKALDEREGSDRDLRLIVPLILVLVLGGLVVLLRSVVAPLLLVVTVVATYAAAMGASWWLFTGPLGFGAMD SGVPLFAFLFLVALGVDYNIFLVTRAREEAAGHGSRGGMLRALSATGGVITSAGILLAAVFAVLGVLPLVVLAQLGTIIC LGVLLDTLLVRTLVVPALALVLGDRFWWPRRVA
Sequences:
>Translated_673_residues MPRILTEAHMTSLITGRRSAWVLALVPFFLALVLIGAVGEGDRASRSTDALPAGLDSTEGTALLDRLPEAASSAAIVLFT ADRGELSRDQLAALRDAGAGLADGGSPLVLAEDGTAALLAVPVPAGSAGEVADRVSALRAAADDAAPDGVQAQVTGPAAV QADLAAVFDGANTRLLLVTALVVAVLLVITYRSPVLWLVPLVVVGVADRLAAVLATQVMARVDVAWDESTVGILSVLVFG TGTDYALLLISRYRDELRTEPSRRRAMAHALRRTAEAVLASATTVVLGLLTLLLSLTPTTRGLGLACAVGVVVAAAFALV VLPAALVLFGRWVFWPRVPHVGEAVTVEADTVWHRIGARVARRPALVAGGSLVLLALMATGIGRIHLGLDQAEQFLDEPE AISAATRLAESFPAGTADPTQVVTEGSGDAVLRAVRSVDGVTSARVSATGGGVVVVDAVLSGRSGENADVVTALREAVAP YDAHVTGAEAKALDEREGSDRDLRLIVPLILVLVLGGLVVLLRSVVAPLLLVVTVVATYAAAMGASWWLFTGPLGFGAMD SGVPLFAFLFLVALGVDYNIFLVTRAREEAAGHGSRGGMLRALSATGGVITSAGILLAAVFAVLGVLPLVVLAQLGTIIC LGVLLDTLLVRTLVVPALALVLGDRFWWPRRVA >Mature_672_residues PRILTEAHMTSLITGRRSAWVLALVPFFLALVLIGAVGEGDRASRSTDALPAGLDSTEGTALLDRLPEAASSAAIVLFTA DRGELSRDQLAALRDAGAGLADGGSPLVLAEDGTAALLAVPVPAGSAGEVADRVSALRAAADDAAPDGVQAQVTGPAAVQ ADLAAVFDGANTRLLLVTALVVAVLLVITYRSPVLWLVPLVVVGVADRLAAVLATQVMARVDVAWDESTVGILSVLVFGT GTDYALLLISRYRDELRTEPSRRRAMAHALRRTAEAVLASATTVVLGLLTLLLSLTPTTRGLGLACAVGVVVAAAFALVV LPAALVLFGRWVFWPRVPHVGEAVTVEADTVWHRIGARVARRPALVAGGSLVLLALMATGIGRIHLGLDQAEQFLDEPEA ISAATRLAESFPAGTADPTQVVTEGSGDAVLRAVRSVDGVTSARVSATGGGVVVVDAVLSGRSGENADVVTALREAVAPY DAHVTGAEAKALDEREGSDRDLRLIVPLILVLVLGGLVVLLRSVVAPLLLVVTVVATYAAAMGASWWLFTGPLGFGAMDS GVPLFAFLFLVALGVDYNIFLVTRAREEAAGHGSRGGMLRALSATGGVITSAGILLAAVFAVLGVLPLVVLAQLGTIICL GVLLDTLLVRTLVVPALALVLGDRFWWPRRVA
Specific function: Unknown
COG id: COG2409
COG function: function code R; Predicted drug exporters of the RND superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004707 - InterPro: IPR004869 - InterPro: IPR000731 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 69365; Mature: 69233
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRILTEAHMTSLITGRRSAWVLALVPFFLALVLIGAVGEGDRASRSTDALPAGLDSTEG CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC TALLDRLPEAASSAAIVLFTADRGELSRDQLAALRDAGAGLADGGSPLVLAEDGTAALLA HHHHHHCCHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEE VPVPAGSAGEVADRVSALRAAADDAAPDGVQAQVTGPAAVQADLAAVFDGANTRLLLVTA EECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCHHHHHHH LVVAVLLVITYRSPVLWLVPLVVVGVADRLAAVLATQVMARVDVAWDESTVGILSVLVFG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC TGTDYALLLISRYRDELRTEPSRRRAMAHALRRTAEAVLASATTVVLGLLTLLLSLTPTT CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RGLGLACAVGVVVAAAFALVVLPAALVLFGRWVFWPRVPHVGEAVTVEADTVWHRIGARV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHH ARRPALVAGGSLVLLALMATGIGRIHLGLDQAEQFLDEPEAISAATRLAESFPAGTADPT HHCCCCEECHHHHHHHHHHHCCCCEEECHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCH QVVTEGSGDAVLRAVRSVDGVTSARVSATGGGVVVVDAVLSGRSGENADVVTALREAVAP HHEECCCCHHHHHHHHHHCCCCCCEEECCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHCC YDAHVTGAEAKALDEREGSDRDLRLIVPLILVLVLGGLVVLLRSVVAPLLLVVTVVATYA CCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAMGASWWLFTGPLGFGAMDSGVPLFAFLFLVALGVDYNIFLVTRAREEAAGHGSRGGML HHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCCCCEE RALSATGGVITSAGILLAAVFAVLGVLPLVVLAQLGTIICLGVLLDTLLVRTLVVPALAL EEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGDRFWWPRRVA HHCCCCCCCCCCC >Mature Secondary Structure PRILTEAHMTSLITGRRSAWVLALVPFFLALVLIGAVGEGDRASRSTDALPAGLDSTEG CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC TALLDRLPEAASSAAIVLFTADRGELSRDQLAALRDAGAGLADGGSPLVLAEDGTAALLA HHHHHHCCHHCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCEEEEE VPVPAGSAGEVADRVSALRAAADDAAPDGVQAQVTGPAAVQADLAAVFDGANTRLLLVTA EECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCHHHHHHH LVVAVLLVITYRSPVLWLVPLVVVGVADRLAAVLATQVMARVDVAWDESTVGILSVLVFG HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHC TGTDYALLLISRYRDELRTEPSRRRAMAHALRRTAEAVLASATTVVLGLLTLLLSLTPTT CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC RGLGLACAVGVVVAAAFALVVLPAALVLFGRWVFWPRVPHVGEAVTVEADTVWHRIGARV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHH ARRPALVAGGSLVLLALMATGIGRIHLGLDQAEQFLDEPEAISAATRLAESFPAGTADPT HHCCCCEECHHHHHHHHHHHCCCCEEECHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCH QVVTEGSGDAVLRAVRSVDGVTSARVSATGGGVVVVDAVLSGRSGENADVVTALREAVAP HHEECCCCHHHHHHHHHHCCCCCCEEECCCCCEEEEEHHHCCCCCCCHHHHHHHHHHHCC YDAHVTGAEAKALDEREGSDRDLRLIVPLILVLVLGGLVVLLRSVVAPLLLVVTVVATYA CCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAMGASWWLFTGPLGFGAMDSGVPLFAFLFLVALGVDYNIFLVTRAREEAAGHGSRGGML HHHCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCCCCEE RALSATGGVITSAGILLAAVFAVLGVLPLVVLAQLGTIICLGVLLDTLLVRTLVVPALAL EEHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLGDRFWWPRRVA HHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1878971; 12000953 [H]