| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is hyuE [H]
Identifier: 119714361
GI number: 119714361
Start: 105424
End: 106143
Strand: Direct
Name: hyuE [H]
Synonym: Noca_0094
Alternate gene names: 119714361
Gene position: 105424-106143 (Clockwise)
Preceding gene: 119714360
Following gene: 119714362
Centisome position: 2.11
GC content: 72.22
Gene sequence:
>720_bases ATGAAGCTCACTGTCGTCAGCCCGTTGCTCGGCGAGGAGTTCGCCGACGGCGTTCGCAAGGAGGTCGCCCAGTGGGCCGG CCCGGACACCGTGATCGACGTCGTCAAGGTCGAGCGAGGCGTCGCCTCCATCGAGTCCGAGTACGACGAGGCCCTGGCCG GGCCAGGCATCCTCGAGCAGGTGGCGCTTGCGGTCGAGCGGGGCGCGGAGGGCGTCTTCGTCACGTGCTTCGGTGACCCC GCGGTCCACGCGGCCCGCGAGATCGTGGACGTCCCGGTGGTGGGCGGCTTCGAGCCGGCCATGCTGAACGCCCTGTCCCT CGGCGAGTCCGTCGGCGTGATCACGGTCCTGGACAACGTGGTGCCGATGATCCGCGGCCTCGTGCGCCGCTACGGGCTCA CCGACCGCTGCAGGTCGGTGCGCGTCGTCGACCTCCCCGTGCTGGCCCTCGACGCCCACGAGGAGCTGCTGGAGCGCCTG TACACCGAGGCCCGCTCCGTTGTGGACAGCGGCGAGGCCGACGTGATCGTGCTGGGCTGCACCGGGATGATCGGCGTCGC GGCCGCGGTGCAGGCCCGGCTGGAGGCCGACGGGGTGTTCGTGCCCGTCGTCGACCCGACCGGCGCCGCCATCCTCTGGC TGGAGTCGCAGATCCGGCTCGGCGTCCGCCCCAGCCGGGCGACCTACATGCCGCCGCCGCCCAAGGACCGCCGCATGTGA
Upstream 100 bases:
>100_bases CAACAGGCCGTCCGACCGGCCCGTCAGTTGGCACATTGCACATGGCCGTCCGGATCGCCGGCGCGCACGATGGACGCACC CACTCCTGAGAGGTGCGTCC
Downstream 100 bases:
>100_bases GTCCGCCCCAGGCGGCACTCCCGATGTTCGGCTCGAGATCGTCATAGTTCGGAAAGGCAGCACATGCGCATCGGGATCGA TGTGGGAGGCACCAACACCG
Product: Asp/Glu racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MKLTVVSPLLGEEFADGVRKEVAQWAGPDTVIDVVKVERGVASIESEYDEALAGPGILEQVALAVERGAEGVFVTCFGDP AVHAAREIVDVPVVGGFEPAMLNALSLGESVGVITVLDNVVPMIRGLVRRYGLTDRCRSVRVVDLPVLALDAHEELLERL YTEARSVVDSGEADVIVLGCTGMIGVAAAVQARLEADGVFVPVVDPTGAAILWLESQIRLGVRPSRATYMPPPPKDRRM
Sequences:
>Translated_239_residues MKLTVVSPLLGEEFADGVRKEVAQWAGPDTVIDVVKVERGVASIESEYDEALAGPGILEQVALAVERGAEGVFVTCFGDP AVHAAREIVDVPVVGGFEPAMLNALSLGESVGVITVLDNVVPMIRGLVRRYGLTDRCRSVRVVDLPVLALDAHEELLERL YTEARSVVDSGEADVIVLGCTGMIGVAAAVQARLEADGVFVPVVDPTGAAILWLESQIRLGVRPSRATYMPPPPKDRRM >Mature_239_residues MKLTVVSPLLGEEFADGVRKEVAQWAGPDTVIDVVKVERGVASIESEYDEALAGPGILEQVALAVERGAEGVFVTCFGDP AVHAAREIVDVPVVGGFEPAMLNALSLGESVGVITVLDNVVPMIRGLVRRYGLTDRCRSVRVVDLPVLALDAHEELLERL YTEARSVVDSGEADVIVLGCTGMIGVAAAVQARLEADGVFVPVVDPTGAAILWLESQIRLGVRPSRATYMPPPPKDRRM
Specific function: Responsible for racemization of the D-5-substituted hydantoins to their corresponding L-amino acids [H]
COG id: COG4126
COG function: function code E; Hydantoin racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To yeast DCG1 and S.pombe SPAC1F7.10 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.99.5 [H]
Molecular weight: Translated: 25465; Mature: 25465
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTVVSPLLGEEFADGVRKEVAQWAGPDTVIDVVKVERGVASIESEYDEALAGPGILEQ CEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VALAVERGAEGVFVTCFGDPAVHAAREIVDVPVVGGFEPAMLNALSLGESVGVITVLDNV HHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHH VPMIRGLVRRYGLTDRCRSVRVVDLPVLALDAHEELLERLYTEARSVVDSGEADVIVLGC HHHHHHHHHHCCCCHHHCCEEEEECCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEC TGMIGVAAAVQARLEADGVFVPVVDPTGAAILWLESQIRLGVRPSRATYMPPPPKDRRM CCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKLTVVSPLLGEEFADGVRKEVAQWAGPDTVIDVVKVERGVASIESEYDEALAGPGILEQ CEEEEECHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH VALAVERGAEGVFVTCFGDPAVHAAREIVDVPVVGGFEPAMLNALSLGESVGVITVLDNV HHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHH VPMIRGLVRRYGLTDRCRSVRVVDLPVLALDAHEELLERLYTEARSVVDSGEADVIVLGC HHHHHHHHHHCCCCHHHCCEEEEECCEEEECHHHHHHHHHHHHHHHHHCCCCCCEEEEEC TGMIGVAAAVQARLEADGVFVPVVDPTGAAILWLESQIRLGVRPSRATYMPPPPKDRRM CCHHHHHHHHHHHHCCCCEEEEEECCCCCEEEEEECCCEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339422 [H]