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The map label for this gene is 119714360

Identifier: 119714360

GI number: 119714360

Start: 104442

End: 105254

Strand: Direct

Name: 119714360

Synonym: Noca_0093

Alternate gene names: NA

Gene position: 104442-105254 (Clockwise)

Preceding gene: 119714359

Following gene: 119714361

Centisome position: 2.09

GC content: 74.29

Gene sequence:

>813_bases
ATGAACAGCGCCGTCCCCGGCACGACCCACGACGACATCGCAGCCCTGACGCCCGCCCGGGCGCGCGAGCGGTTCCGAGC
GGGGGAGCGGGTCGCGACGAGCGGCTGGTGCCCGGGCTTCACCCAGGCCAACCTGATCGCCGTGCCGCAGCAGTACGCCT
ACGACGTCCTGCTCTTCACGCAGCGCAACCCCAAGGCGTGCCCCGTCATCGACGTCACCGATGCCGGCAGCGTGGAGCCC
GGCATCGCCCCGGGGGCCGATCTCCGCACCGACCTGCCCGGCTACCGGGTGTACGAGGAGGGCCGCCTGGTCGCCGAGAC
CGGCGACGCGCGCGAGCACTGGCGCGAGGACATGGTCGCCTTCCTCATCGGCTGCAGCTTCACGTTCGAGCGGGCCCTGC
TCGAGTCCGGCGTCCCGGTGCGCCACCTGACGGCCGGCACCAACGTGCCGATGTACCGGACCAACCGGGCGTGCCGGCCC
GCCGGGCGCCTGCACGGGCCGATGGTGGTCTCCATGCGGGCGGTGCCGGCCGACCAGGTCGCCGCCGCGGTCCAGGTGAC
CAGCCGGTTCCCGAGCATGCACGGTGCCCCCGTGCACGTCGGCGACCCCGCCGCCCTCGGCATCGAGGACCTGGCCTGGC
CCGACTACGGCGACGCGCCGGTGCTGGCCGACGGCGACGTGCCGGTGTTCTGGGCCTGCGGGGTGACCCCGCAGGCCGTC
ATCGCGGCCGTCGGCATCCCCTACGCCGTGTCCCACGCGCCCGGACAGATGTTCATCTCCGACGTGCCCGAGGCGACCTG
GGCGCTGGCCTGA

Upstream 100 bases:

>100_bases
TCGCGGTCGTCGTCGACGTCGACGTCGACCGCGCAGCCCAGGTCCGACCCGGTCAGGACCTGTAGGTCACGATCGTCCCC
AACCCCCCGCGAGGTACCTG

Downstream 100 bases:

>100_bases
CCCGCGGGTGAGCCCCGTGCACGGGGCCGGTCACCGCTGACGGTCCCCGGTCCCGAGCACCGTCATGTGCAACAGGCCGT
CCGACCGGCCCGTCAGTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MNSAVPGTTHDDIAALTPARARERFRAGERVATSGWCPGFTQANLIAVPQQYAYDVLLFTQRNPKACPVIDVTDAGSVEP
GIAPGADLRTDLPGYRVYEEGRLVAETGDAREHWREDMVAFLIGCSFTFERALLESGVPVRHLTAGTNVPMYRTNRACRP
AGRLHGPMVVSMRAVPADQVAAAVQVTSRFPSMHGAPVHVGDPAALGIEDLAWPDYGDAPVLADGDVPVFWACGVTPQAV
IAAVGIPYAVSHAPGQMFISDVPEATWALA

Sequences:

>Translated_270_residues
MNSAVPGTTHDDIAALTPARARERFRAGERVATSGWCPGFTQANLIAVPQQYAYDVLLFTQRNPKACPVIDVTDAGSVEP
GIAPGADLRTDLPGYRVYEEGRLVAETGDAREHWREDMVAFLIGCSFTFERALLESGVPVRHLTAGTNVPMYRTNRACRP
AGRLHGPMVVSMRAVPADQVAAAVQVTSRFPSMHGAPVHVGDPAALGIEDLAWPDYGDAPVLADGDVPVFWACGVTPQAV
IAAVGIPYAVSHAPGQMFISDVPEATWALA
>Mature_270_residues
MNSAVPGTTHDDIAALTPARARERFRAGERVATSGWCPGFTQANLIAVPQQYAYDVLLFTQRNPKACPVIDVTDAGSVEP
GIAPGADLRTDLPGYRVYEEGRLVAETGDAREHWREDMVAFLIGCSFTFERALLESGVPVRHLTAGTNVPMYRTNRACRP
AGRLHGPMVVSMRAVPADQVAAAVQVTSRFPSMHGAPVHVGDPAALGIEDLAWPDYGDAPVLADGDVPVFWACGVTPQAV
IAAVGIPYAVSHAPGQMFISDVPEATWALA

Specific function: Unknown

COG id: COG4336

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0317 family

Homologues:

Organism=Homo sapiens, GI156139135, Length=226, Percent_Identity=30.9734513274336, Blast_Score=117, Evalue=8e-27,
Organism=Homo sapiens, GI156139133, Length=226, Percent_Identity=31.4159292035398, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI156139131, Length=226, Percent_Identity=31.4159292035398, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI156139129, Length=226, Percent_Identity=31.4159292035398, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI156139137, Length=226, Percent_Identity=28.3185840707965, Blast_Score=88, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y093_NOCSJ (A1SCV3)

Other databases:

- EMBL:   CP000509
- RefSeq:   YP_921325.1
- ProteinModelPortal:   A1SCV3
- SMR:   A1SCV3
- STRING:   A1SCV3
- GeneID:   4600066
- GenomeReviews:   CP000509_GR
- KEGG:   nca:Noca_0093
- eggNOG:   COG4336
- HOGENOM:   HBG289473
- OMA:   GPMVVSM
- ProtClustDB:   PRK05463
- BioCyc:   NSP35761:NOCA_0093-MONOMER
- HAMAP:   MF_01830
- InterPro:   IPR009906
- InterPro:   IPR016938
- PIRSF:   PIRSF029755

Pfam domain/function: PF07286 DUF1445

EC number: NA

Molecular weight: Translated: 28757; Mature: 28757

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSAVPGTTHDDIAALTPARARERFRAGERVATSGWCPGFTQANLIAVPQQYAYDVLLFT
CCCCCCCCCCCCHHHCCCHHHHHHHHCCCEEECCCCCCCCCCCCEEECCHHHCEEEEEEE
QRNPKACPVIDVTDAGSVEPGIAPGADLRTDLPGYRVYEEGRLVAETGDAREHWREDMVA
CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCHHHHHHHHHHH
FLIGCSFTFERALLESGVPVRHLTAGTNVPMYRTNRACRPAGRLHGPMVVSMRAVPADQV
HHHHCCHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCEEEEEECCCHHHH
AAAVQVTSRFPSMHGAPVHVGDPAALGIEDLAWPDYGDAPVLADGDVPVFWACGVTPQAV
HHHHHHHHHCCCCCCCEEECCCCCCCCHHHCCCCCCCCCCEEECCCCCEEEECCCCHHHH
IAAVGIPYAVSHAPGQMFISDVPEATWALA
HHHHCCCCEECCCCCCHHHHCCCCHHCCCC
>Mature Secondary Structure
MNSAVPGTTHDDIAALTPARARERFRAGERVATSGWCPGFTQANLIAVPQQYAYDVLLFT
CCCCCCCCCCCCHHHCCCHHHHHHHHCCCEEECCCCCCCCCCCCEEECCHHHCEEEEEEE
QRNPKACPVIDVTDAGSVEPGIAPGADLRTDLPGYRVYEEGRLVAETGDAREHWREDMVA
CCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEECCEEEEECCCHHHHHHHHHHH
FLIGCSFTFERALLESGVPVRHLTAGTNVPMYRTNRACRPAGRLHGPMVVSMRAVPADQV
HHHHCCHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCCCCCCEEEEEECCCHHHH
AAAVQVTSRFPSMHGAPVHVGDPAALGIEDLAWPDYGDAPVLADGDVPVFWACGVTPQAV
HHHHHHHHHCCCCCCCEEECCCCCCCCHHHCCCCCCCCCCEEECCCCCEEEECCCCHHHH
IAAVGIPYAVSHAPGQMFISDVPEATWALA
HHHHCCCCEECCCCCCHHHHCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA