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The map label for this gene is ybgK [H]

Identifier: 119714359

GI number: 119714359

Start: 103558

End: 104406

Strand: Direct

Name: ybgK [H]

Synonym: Noca_0092

Alternate gene names: 119714359

Gene position: 103558-104406 (Clockwise)

Preceding gene: 119714357

Following gene: 119714360

Centisome position: 2.08

GC content: 76.8

Gene sequence:

>849_bases
GTGAGCGGCGCCGGGCTGGAGGTCCTCTCCGCCGGGCCGCTCACCACCGTGCAGGACCTCGGGCGTCCCGGCCACGCCCC
GTGGGGCGTCGGGCGGAGCGGGGCCGCGGATCGCCGGTCCCTCCGGCTGGCCAACCGGCTGGTCGGCAACGCGGTGGAGG
CGGCTGGACTCGAGGTGCTGCTCGGCGGTCTCGAGCTGCGGCCGGACCGAGACGTCGTGATCGCCCTGACCGGCGCCCGC
TGCGCGGCCACCATCGGCGGCCGGGCCGCCGACCACAACACCGTGCTGCGGGTGCCGGCCGGGTCGGTCCTGCGGCTCGG
CACCGCGTCCGCAGGACTGCGTACCTACGTCGCCGTGCGGGGCGGCATCGACGTCCCTCCCGTCCTCGGGTCGCGCTCGT
ACGACGTGCTCTCCGGCCTCGGCCCGCCGGTCCTGGCGGCCGGGACGGTGCTCGCCGTCGGCGCGCCCCCGGCCCGCTTC
CCGTGCGTGGACATGGCGCCGGTGCCCGACCCCCCTGCCGGCCCGGTCCGCCTCCGGGTGATGTCCGGCCCGCACGACGA
CTGGTTCACGGGCGACGCCCTCGGGCTGCTCGAGCGGACCGCGTGGACGGTCACGACCGCGAGCGACAGGATCGGCATGC
GGCTGGCCGGTGCCGAGCTCGCCCGGGCCCGGAGCACCGAGCTGCCGAGTGCGGGCGTCGTCCGCGGCGCGCTGCAGGTC
ACCCCCGCGGGGCAGCCCACCCTGTTCATGTCCGATCATCCTCTCACCGGGGGATACCCGGTGATCGCGGTCGTCGTCGA
CGTCGACGTCGACCGCGCAGCCCAGGTCCGACCCGGTCAGGACCTGTAG

Upstream 100 bases:

>100_bases
AGCTCCTCGGCCGCACCTCCCTGGAGATGTGGGACCTGCACCGGGACCCACCCGCGCTGCTGTCCCCGGGGACCCGGGTC
CGGTTCGTCGAGGTGGACGC

Downstream 100 bases:

>100_bases
GTCACGATCGTCCCCAACCCCCCGCGAGGTACCTGATGAACAGCGCCGTCCCCGGCACGACCCACGACGACATCGCAGCC
CTGACGCCCGCCCGGGCGCG

Product: urea amidolyase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MSGAGLEVLSAGPLTTVQDLGRPGHAPWGVGRSGAADRRSLRLANRLVGNAVEAAGLEVLLGGLELRPDRDVVIALTGAR
CAATIGGRAADHNTVLRVPAGSVLRLGTASAGLRTYVAVRGGIDVPPVLGSRSYDVLSGLGPPVLAAGTVLAVGAPPARF
PCVDMAPVPDPPAGPVRLRVMSGPHDDWFTGDALGLLERTAWTVTTASDRIGMRLAGAELARARSTELPSAGVVRGALQV
TPAGQPTLFMSDHPLTGGYPVIAVVVDVDVDRAAQVRPGQDL

Sequences:

>Translated_282_residues
MSGAGLEVLSAGPLTTVQDLGRPGHAPWGVGRSGAADRRSLRLANRLVGNAVEAAGLEVLLGGLELRPDRDVVIALTGAR
CAATIGGRAADHNTVLRVPAGSVLRLGTASAGLRTYVAVRGGIDVPPVLGSRSYDVLSGLGPPVLAAGTVLAVGAPPARF
PCVDMAPVPDPPAGPVRLRVMSGPHDDWFTGDALGLLERTAWTVTTASDRIGMRLAGAELARARSTELPSAGVVRGALQV
TPAGQPTLFMSDHPLTGGYPVIAVVVDVDVDRAAQVRPGQDL
>Mature_281_residues
SGAGLEVLSAGPLTTVQDLGRPGHAPWGVGRSGAADRRSLRLANRLVGNAVEAAGLEVLLGGLELRPDRDVVIALTGARC
AATIGGRAADHNTVLRVPAGSVLRLGTASAGLRTYVAVRGGIDVPPVLGSRSYDVLSGLGPPVLAAGTVLAVGAPPARFP
CVDMAPVPDPPAGPVRLRVMSGPHDDWFTGDALGLLERTAWTVTTASDRIGMRLAGAELARARSTELPSAGVVRGALQVT
PAGQPTLFMSDHPLTGGYPVIAVVVDVDVDRAAQVRPGQDL

Specific function: Unknown

COG id: COG1984

COG function: function code E; Allophanate hydrolase subunit 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis ycsJ and yeast urea amidolyase (DUR1,2) [H]

Homologues:

Organism=Escherichia coli, GI1786930, Length=278, Percent_Identity=38.4892086330935, Blast_Score=158, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6319685, Length=302, Percent_Identity=32.1192052980132, Blast_Score=116, Evalue=4e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003778 [H]

Pfam domain/function: PF02626 AHS2 [H]

EC number: NA

Molecular weight: Translated: 28760; Mature: 28629

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGAGLEVLSAGPLTTVQDLGRPGHAPWGVGRSGAADRRSLRLANRLVGNAVEAAGLEVL
CCCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEE
LGGLELRPDRDVVIALTGARCAATIGGRAADHNTVLRVPAGSVLRLGTASAGLRTYVAVR
EECEEECCCCCEEEEEECCCEEEECCCCCCCCCCEEEECCCCEEEECCCCCCCEEEEEEE
GGIDVPPVLGSRSYDVLSGLGPPVLAAGTVLAVGAPPARFPCVDMAPVPDPPAGPVRLRV
CCCCCCCCCCCCCHHHHHCCCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
MSGPHDDWFTGDALGLLERTAWTVTTASDRIGMRLAGAELARARSTELPSAGVVRGALQV
ECCCCCCCCCCCHHHHHHHCEEEEEECCCCCCEEECCHHHHHHHCCCCCCCCEEEEEEEE
TPAGQPTLFMSDHPLTGGYPVIAVVVDVDVDRAAQVRPGQDL
CCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCC
>Mature Secondary Structure 
SGAGLEVLSAGPLTTVQDLGRPGHAPWGVGRSGAADRRSLRLANRLVGNAVEAAGLEVL
CCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEE
LGGLELRPDRDVVIALTGARCAATIGGRAADHNTVLRVPAGSVLRLGTASAGLRTYVAVR
EECEEECCCCCEEEEEECCCEEEECCCCCCCCCCEEEECCCCEEEECCCCCCCEEEEEEE
GGIDVPPVLGSRSYDVLSGLGPPVLAAGTVLAVGAPPARFPCVDMAPVPDPPAGPVRLRV
CCCCCCCCCCCCCHHHHHCCCCCHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEE
MSGPHDDWFTGDALGLLERTAWTVTTASDRIGMRLAGAELARARSTELPSAGVVRGALQV
ECCCCCCCCCCCHHHHHHHCEEEEEECCCCCCEEECCHHHHHHHCCCCCCCCEEEEEEEE
TPAGQPTLFMSDHPLTGGYPVIAVVVDVDVDRAAQVRPGQDL
CCCCCCEEEECCCCCCCCCEEEEEEEECCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]