Click here to switch to the map view.

The map label for this gene is 119714320

Identifier: 119714320

GI number: 119714320

Start: 54476

End: 55060

Strand: Reverse

Name: 119714320

Synonym: Noca_0048

Alternate gene names: NA

Gene position: 55060-54476 (Counterclockwise)

Preceding gene: 119714324

Following gene: 119714319

Centisome position: 1.1

GC content: 72.65

Gene sequence:

>585_bases
ATGTTCGGATTCTGGCGCTACCTCAGTTCCAGCGCACACGACGTCTCCCGCAACACGCTGCGCGAGGCGTTCCGCCTCCT
CGTGCACGAGCGGCTGCTCGTGCACGAGCTCAACCGGGGCGTCTTCGTCCGGGAGGCGTCGCTCGACGAGGTCGCCGACC
TGTTCCGGTTGCGCCGGGTGCTCGAGTGCTCCTCGGTCCGCACCCCGGAACCGCCCGAGGCCGCGGTGGCGCGGCTCCGG
TCGGCGGTGTCCGAGGGCGAGACGGCCGCCCGTGAGGGCCAGTGGCAGGAGGTCGGCACCGCCAACATGCACTTCCACCT
CGCGGTGGGGGCCCTCGCCGGGAGCCCCCGGATCGACGAGTTGATGGAGCAGCTGATGGCGGAGCTGCGCCTGGTCTTCC
ACGTGATGGCGGCGCCCCAGAAGTTCCACGCGCCCTACCTCGAGGACAACGCCCGGATCTGCGCCCTCGTCCAGGCCGGC
CGCGGCGAGGAGGCCGCGGCGCTGCTCGACACCTACCTGGCGCGCGCCGAGCGGCAGCTGGTCCAGGCGTACCGGCTCGT
CGCCCACGCGACGGCCAGCGCGTAG

Upstream 100 bases:

>100_bases
TCAGGTCGACGTCAACACCAAGCCCCGCGAGCACCTGGACCGGGCGATCCGCGAGGCCGGCGGGCGCCAGGCCGCACCTG
GCAAGATCGTCGCGCAACTG

Downstream 100 bases:

>100_bases
CGCAGCGGCCGGACCGCGACAGCCGTCCGTACGGGGGCGCAGGCGAGAGGCCTAGCCTCCGGCCCGGGGTGACCCGAGGC
GCGCGCGGAGCATCGCCGCC

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; GntR-Family Transcriptional Regulator; Transcriptional Regulator; Transcriptional Regulator GntR; GntR Family Regulatory; HTH-Type Transcriptional Regulator YdhC; Transcriptional Regulator Protein GntR Family; Transcriptional Regulator Protein; GntR Family Regulatory Protein; Transcription Regulator

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MFGFWRYLSSSAHDVSRNTLREAFRLLVHERLLVHELNRGVFVREASLDEVADLFRLRRVLECSSVRTPEPPEAAVARLR
SAVSEGETAAREGQWQEVGTANMHFHLAVGALAGSPRIDELMEQLMAELRLVFHVMAAPQKFHAPYLEDNARICALVQAG
RGEEAAALLDTYLARAERQLVQAYRLVAHATASA

Sequences:

>Translated_194_residues
MFGFWRYLSSSAHDVSRNTLREAFRLLVHERLLVHELNRGVFVREASLDEVADLFRLRRVLECSSVRTPEPPEAAVARLR
SAVSEGETAAREGQWQEVGTANMHFHLAVGALAGSPRIDELMEQLMAELRLVFHVMAAPQKFHAPYLEDNARICALVQAG
RGEEAAALLDTYLARAERQLVQAYRLVAHATASA
>Mature_194_residues
MFGFWRYLSSSAHDVSRNTLREAFRLLVHERLLVHELNRGVFVREASLDEVADLFRLRRVLECSSVRTPEPPEAAVARLR
SAVSEGETAAREGQWQEVGTANMHFHLAVGALAGSPRIDELMEQLMAELRLVFHVMAAPQKFHAPYLEDNARICALVQAG
RGEEAAALLDTYLARAERQLVQAYRLVAHATASA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21690; Mature: 21690

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGFWRYLSSSAHDVSRNTLREAFRLLVHERLLVHELNRGVFVREASLDEVADLFRLRRV
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHH
LECSSVRTPEPPEAAVARLRSAVSEGETAAREGQWQEVGTANMHFHLAVGALAGSPRIDE
HHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCHHCCCCCEEEEEEHHHHCCCCCHHH
LMEQLMAELRLVFHVMAAPQKFHAPYLEDNARICALVQAGRGEEAAALLDTYLARAERQL
HHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
VQAYRLVAHATASA
HHHHHHHHHHHCCC
>Mature Secondary Structure
MFGFWRYLSSSAHDVSRNTLREAFRLLVHERLLVHELNRGVFVREASLDEVADLFRLRRV
CCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHH
LECSSVRTPEPPEAAVARLRSAVSEGETAAREGQWQEVGTANMHFHLAVGALAGSPRIDE
HHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHCCCCHHCCCCCEEEEEEHHHHCCCCCHHH
LMEQLMAELRLVFHVMAAPQKFHAPYLEDNARICALVQAGRGEEAAALLDTYLARAERQL
HHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHH
VQAYRLVAHATASA
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA