Click here to switch to the map view.

The map label for this gene is mmgC [H]

Identifier: 119714318

GI number: 119714318

Start: 51689

End: 52852

Strand: Reverse

Name: mmgC [H]

Synonym: Noca_0046

Alternate gene names: 119714318

Gene position: 52852-51689 (Counterclockwise)

Preceding gene: 119714319

Following gene: 119714310

Centisome position: 1.06

GC content: 69.76

Gene sequence:

>1164_bases
ATGACGCTGGCACCCGACGAGCTCGAGGAGATGGCCGCCACCACGCGGCGGTTCATCCGGGAGCGTATCCACCCCATCGA
GCAGGAGGTCGACGACACCGACCACATCGATCCCCAGGTCTGGCAGTCCCTGGTCGACGAGTCGGTCGAGCTCGGTCTCT
ACACGGCGAACGTGCCGGAGACCCTCGGCGGGCCGGGTCTCACGATCGCCGAGCAGACCCGCCTGTGGGAGGAGTTCGGC
CACACCTCGTGGCCGTTCAGCTACCTGCTCGCGCGGCCGCACCGAGTGCTCTTCGCCTGCACCGAGGAGCAGCGTTCGCG
CTACCTCGACCCCGTCCTCGCGGGCAAGCGGGCCCAGTGCTTCGCCCTCACCGAGCCCGGCGCCGGGTCGGACAACTCCG
CGATGCGCACCCGCGCGGAGAAGGTCGAAGGAGGCTACGTCCTCAACGGCGCGAAGCACTTCATCAGTCACGGCAACGCC
GACTTCGCGATCGTCTTCGCCGTCACGGGTCCCCCGCTGCGCGGCCGCACGCCGCAGGTCACGGCGTTCCTCGTCGACCG
TGGGACGCCGGGCTTCACCGTCGGCAAGGCCCAGCGGATGATGGGCTGGTCGGGCATGGAGGAGTGCGAGCTCGTCTTCG
AGAACTGCTTCGTGCCCGACGACCAGGTGCTGGGCACCCCCGGCGAGGCCCTGCGCCTCGGGCTGGCGTCGGTTGCGCAG
CGTCGGCTCCAGATGGCCGCCTACTGCGTCGGCGCCATGGAGCGGCTGCTCGGGCTGAGCATCGCCTACACGCGCGACCG
GGTCGTCTTCGACGAGCCTCTCTTCGACAAGCAGGGCATCCGCTGGATGCTGGCCGAAGCCGCCATGGAGCCGTACCTCG
CCCGCGAGGCGACCTACAAGGCAGCCCGCCTGTGCGACGAGGCGCGCGCTGCCGGCCGGTCGGAGATCGAGCTGTCACGG
TTGTTCGCTCGCGAGATCTCGATCGCCAAGCTGCACGCCACGCGCGCCCTGAACCGGGTGGCGGACGTCGCCGTCCAGGT
GCACGGCGGCATGGGGTGGTGTCGGGAGTACCCGGTCGAACGTCTCTACCGGGACGCGCGCGTGTTCCGGATCATCGAGG
GCGCCGACGAGGTCCACAAGGAGATCATCGCCAAAGCGCTCTGA

Upstream 100 bases:

>100_bases
GACCTCGGCGGCTACACCCCCGACGAGATCGACGAGCTCGCCCGCGACGGGGTGGTGGGTGTGGCCGACCACCCCGCCGC
GACGGCGTGAGAGGACGACC

Downstream 100 bases:

>100_bases
GCCTGCAGTGCCGCGTCCGGCCGGTGTCGCTCCCGGGGCGGCCGGGCTCAGCGCGGCGCGGAGGCCACTCCGACCAGCAC
GGCGTCTTCACCGCAGGTGA

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 387; Mature: 386

Protein sequence:

>387_residues
MTLAPDELEEMAATTRRFIRERIHPIEQEVDDTDHIDPQVWQSLVDESVELGLYTANVPETLGGPGLTIAEQTRLWEEFG
HTSWPFSYLLARPHRVLFACTEEQRSRYLDPVLAGKRAQCFALTEPGAGSDNSAMRTRAEKVEGGYVLNGAKHFISHGNA
DFAIVFAVTGPPLRGRTPQVTAFLVDRGTPGFTVGKAQRMMGWSGMEECELVFENCFVPDDQVLGTPGEALRLGLASVAQ
RRLQMAAYCVGAMERLLGLSIAYTRDRVVFDEPLFDKQGIRWMLAEAAMEPYLAREATYKAARLCDEARAAGRSEIELSR
LFAREISIAKLHATRALNRVADVAVQVHGGMGWCREYPVERLYRDARVFRIIEGADEVHKEIIAKAL

Sequences:

>Translated_387_residues
MTLAPDELEEMAATTRRFIRERIHPIEQEVDDTDHIDPQVWQSLVDESVELGLYTANVPETLGGPGLTIAEQTRLWEEFG
HTSWPFSYLLARPHRVLFACTEEQRSRYLDPVLAGKRAQCFALTEPGAGSDNSAMRTRAEKVEGGYVLNGAKHFISHGNA
DFAIVFAVTGPPLRGRTPQVTAFLVDRGTPGFTVGKAQRMMGWSGMEECELVFENCFVPDDQVLGTPGEALRLGLASVAQ
RRLQMAAYCVGAMERLLGLSIAYTRDRVVFDEPLFDKQGIRWMLAEAAMEPYLAREATYKAARLCDEARAAGRSEIELSR
LFAREISIAKLHATRALNRVADVAVQVHGGMGWCREYPVERLYRDARVFRIIEGADEVHKEIIAKAL
>Mature_386_residues
TLAPDELEEMAATTRRFIRERIHPIEQEVDDTDHIDPQVWQSLVDESVELGLYTANVPETLGGPGLTIAEQTRLWEEFGH
TSWPFSYLLARPHRVLFACTEEQRSRYLDPVLAGKRAQCFALTEPGAGSDNSAMRTRAEKVEGGYVLNGAKHFISHGNAD
FAIVFAVTGPPLRGRTPQVTAFLVDRGTPGFTVGKAQRMMGWSGMEECELVFENCFVPDDQVLGTPGEALRLGLASVAQR
RLQMAAYCVGAMERLLGLSIAYTRDRVVFDEPLFDKQGIRWMLAEAAMEPYLAREATYKAARLCDEARAAGRSEIELSRL
FAREISIAKLHATRALNRVADVAVQVHGGMGWCREYPVERLYRDARVFRIIEGADEVHKEIIAKAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=389, Percent_Identity=32.6478149100257, Blast_Score=203, Evalue=3e-52,
Organism=Homo sapiens, GI4501859, Length=388, Percent_Identity=31.1855670103093, Blast_Score=196, Evalue=2e-50,
Organism=Homo sapiens, GI187960098, Length=388, Percent_Identity=31.9587628865979, Blast_Score=182, Evalue=5e-46,
Organism=Homo sapiens, GI4557231, Length=388, Percent_Identity=31.9587628865979, Blast_Score=182, Evalue=5e-46,
Organism=Homo sapiens, GI4557235, Length=388, Percent_Identity=30.6701030927835, Blast_Score=172, Evalue=3e-43,
Organism=Homo sapiens, GI76496475, Length=388, Percent_Identity=30.6701030927835, Blast_Score=172, Evalue=3e-43,
Organism=Homo sapiens, GI226958412, Length=394, Percent_Identity=28.4263959390863, Blast_Score=172, Evalue=5e-43,
Organism=Homo sapiens, GI21361497, Length=398, Percent_Identity=30.1507537688442, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI226958414, Length=376, Percent_Identity=27.6595744680851, Blast_Score=164, Evalue=2e-40,
Organism=Homo sapiens, GI4501857, Length=379, Percent_Identity=29.8153034300792, Blast_Score=159, Evalue=3e-39,
Organism=Homo sapiens, GI7656849, Length=347, Percent_Identity=28.8184438040346, Blast_Score=157, Evalue=1e-38,
Organism=Homo sapiens, GI38505218, Length=398, Percent_Identity=26.8844221105528, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI48976061, Length=415, Percent_Identity=27.4698795180723, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI211971008, Length=415, Percent_Identity=27.4698795180723, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI4503943, Length=299, Percent_Identity=30.1003344481605, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI7669494, Length=273, Percent_Identity=31.1355311355311, Blast_Score=89, Evalue=5e-18,
Organism=Escherichia coli, GI87081958, Length=331, Percent_Identity=26.8882175226586, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1786223, Length=360, Percent_Identity=25.5555555555556, Blast_Score=99, Evalue=4e-22,
Organism=Escherichia coli, GI87082384, Length=261, Percent_Identity=31.0344827586207, Blast_Score=83, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17570075, Length=386, Percent_Identity=30.8290155440415, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI17534899, Length=388, Percent_Identity=30.6701030927835, Blast_Score=185, Evalue=3e-47,
Organism=Caenorhabditis elegans, GI17569725, Length=387, Percent_Identity=31.7829457364341, Blast_Score=183, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI71985184, Length=379, Percent_Identity=33.245382585752, Blast_Score=179, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI17508101, Length=386, Percent_Identity=30.0518134715026, Blast_Score=176, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI17538396, Length=391, Percent_Identity=27.3657289002558, Blast_Score=161, Evalue=7e-40,
Organism=Caenorhabditis elegans, GI17506239, Length=383, Percent_Identity=28.7206266318538, Blast_Score=161, Evalue=7e-40,
Organism=Caenorhabditis elegans, GI17533517, Length=389, Percent_Identity=26.7352185089974, Blast_Score=138, Evalue=4e-33,
Organism=Caenorhabditis elegans, GI71985192, Length=301, Percent_Identity=30.8970099667774, Blast_Score=130, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI17505929, Length=391, Percent_Identity=29.4117647058824, Blast_Score=129, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI17551932, Length=383, Percent_Identity=26.6318537859008, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI71990804, Length=311, Percent_Identity=29.2604501607717, Blast_Score=125, Evalue=5e-29,
Organism=Caenorhabditis elegans, GI17534353, Length=396, Percent_Identity=26.2626262626263, Blast_Score=113, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17562446, Length=358, Percent_Identity=27.6536312849162, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI32563615, Length=230, Percent_Identity=27.8260869565217, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71982178, Length=275, Percent_Identity=25.8181818181818, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI21356377, Length=385, Percent_Identity=29.6103896103896, Blast_Score=189, Evalue=4e-48,
Organism=Drosophila melanogaster, GI24660351, Length=389, Percent_Identity=32.133676092545, Blast_Score=181, Evalue=5e-46,
Organism=Drosophila melanogaster, GI24666513, Length=395, Percent_Identity=31.6455696202532, Blast_Score=181, Evalue=9e-46,
Organism=Drosophila melanogaster, GI24646207, Length=383, Percent_Identity=31.331592689295, Blast_Score=172, Evalue=5e-43,
Organism=Drosophila melanogaster, GI281363737, Length=390, Percent_Identity=29.7435897435897, Blast_Score=165, Evalue=5e-41,
Organism=Drosophila melanogaster, GI21355753, Length=379, Percent_Identity=27.7044854881267, Blast_Score=147, Evalue=1e-35,
Organism=Drosophila melanogaster, GI19920834, Length=301, Percent_Identity=29.9003322259136, Blast_Score=85, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43215; Mature: 43084

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS00037 MYB_1 ; PS00072 ACYL_COA_DH_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLAPDELEEMAATTRRFIRERIHPIEQEVDDTDHIDPQVWQSLVDESVELGLYTANVPE
CCCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHHHHHCEEEECCCCH
TLGGPGLTIAEQTRLWEEFGHTSWPFSYLLARPHRVLFACTEEQRSRYLDPVLAGKRAQC
HCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEECHHHHHHHCCHHHCCCCCEE
FALTEPGAGSDNSAMRTRAEKVEGGYVLNGAKHFISHGNADFAIVFAVTGPPLRGRTPQV
EEEECCCCCCCCHHHHHHHHHCCCCEEECCHHHHHHCCCCCEEEEEEEECCCCCCCCCCE
TAFLVDRGTPGFTVGKAQRMMGWSGMEECELVFENCFVPDDQVLGTPGEALRLGLASVAQ
EEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
RRLQMAAYCVGAMERLLGLSIAYTRDRVVFDEPLFDKQGIRWMLAEAAMEPYLAREATYK
HHHHHHHHHHHHHHHHHCCHHEEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AARLCDEARAAGRSEIELSRLFAREISIAKLHATRALNRVADVAVQVHGGMGWCREYPVE
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHCCHH
RLYRDARVFRIIEGADEVHKEIIAKAL
HHHHHHHHHHHHHCHHHHHHHHHHHCC
>Mature Secondary Structure 
TLAPDELEEMAATTRRFIRERIHPIEQEVDDTDHIDPQVWQSLVDESVELGLYTANVPE
CCCHHHHHHHHHHHHHHHHHHHCHHHHHCCCCCCCCHHHHHHHHHHHHHCEEEECCCCH
TLGGPGLTIAEQTRLWEEFGHTSWPFSYLLARPHRVLFACTEEQRSRYLDPVLAGKRAQC
HCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCEEEEEECHHHHHHHCCHHHCCCCCEE
FALTEPGAGSDNSAMRTRAEKVEGGYVLNGAKHFISHGNADFAIVFAVTGPPLRGRTPQV
EEEECCCCCCCCHHHHHHHHHCCCCEEECCHHHHHHCCCCCEEEEEEEECCCCCCCCCCE
TAFLVDRGTPGFTVGKAQRMMGWSGMEECELVFENCFVPDDQVLGTPGEALRLGLASVAQ
EEEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH
RRLQMAAYCVGAMERLLGLSIAYTRDRVVFDEPLFDKQGIRWMLAEAAMEPYLAREATYK
HHHHHHHHHHHHHHHHHCCHHEEECCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AARLCDEARAAGRSEIELSRLFAREISIAKLHATRALNRVADVAVQVHGGMGWCREYPVE
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHCCHH
RLYRDARVFRIIEGADEVHKEIIAKAL
HHHHHHHHHHHHHCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8759838; 8969508; 9384377 [H]