| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714317
Identifier: 119714317
GI number: 119714317
Start: 50721
End: 51641
Strand: Direct
Name: 119714317
Synonym: Noca_0045
Alternate gene names: NA
Gene position: 50721-51641 (Clockwise)
Preceding gene: 119714316
Following gene: 119714321
Centisome position: 1.02
GC content: 74.59
Gene sequence:
>921_bases GTGAGTGCCGCGCGCGGCGTCGACGACTGGTCCCGCACGCCGGACCGGGCCGCCCAGAACGAGACCTTCGGCCCACGCCG GGTCGTCGTGAGCGATGCGCTGGTGCGGCGCCACGCCTTCGTCCACGACGCCGCGGTCTCGGCGGTGAGCCTGCCGACCG GCGAGGTGTCGCCCCTGGTCGTGGGCAACGACCTGCTGCGCATCTACGAGGAGCGTCACCAGCGCCACGCTGACGTCGGT GGGCTGCACCTGCGCGAGTCGCTGCAGCTGCTGTCGCCCGTGTGGACAGGGGAGGTGCTGGAGCTCTCCGGCCGGTACGC CGGCTGGTTTCCGCGGGGCGACGTGGCGTGCCTGGTCGTCGATGCCGAAGCGCACGGCGAGGACGGACGCCTGATCGCGC GGGCGCGCGCGACGGAGTCGCTGCCGGCCGCTCCCGACGGTGTGCCCGAGCGCCCGCCGCTGCCCAGCCTTCCACGCCGG GTGTCTCCTTCGGCGGGCCCGGTGGGCGAGGCCGCACACCCGTGGCGCACACCGATGCCCGGCGCACGGCTTCCCGAGCT CCGCCGCCGGCTGGAGCAGGAGCACCTCTCGGTGTACTCCGGGGGCGCGTCGTTCGAGCGGAACCTGCACACCGACCCCG ACAAGGCGGCCGAGCGTGGCTACGCGCGTCCGGTGGCGCAGGGCATGCACCTGTGCGGCTTGGTGGACGAGCTGTGCCGC CAGCACCTCGGCGTGCGGTGGTGGCTCGGGGGCGAGCTCGACGTCCGGTTCGTGGGACCGGTGCTGGCCGGCAGCCCCTT GGTGGTCGGCGGTGCCGTGGTCGCTACCGACGAGCGCGGCGGCAGCCGGGTCGAGATCGACGTCTGGGTCACCTGCGGTG AAGACGCCGTGCTGGTCGGAGTGGCCTCCGCGCCGCGCTGA
Upstream 100 bases:
>100_bases AGATCGACCTTCGGTACTGCGGCGAGATCGCGGGTACCGAGGACCGCCAGGAGTCGCTCCGGGCGTTCCTCGAGAAGCGG CCGCCCGTGGTCGTCGGCAG
Downstream 100 bases:
>100_bases GCCCGGCCGCCCCGGGAGCGACACCGGCCGGACGCGGCACTGCAGGCTCAGAGCGCTTTGGCGATGATCTCCTTGTGGAC CTCGTCGGCGCCCTCGATGA
Product: dehydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MSAARGVDDWSRTPDRAAQNETFGPRRVVVSDALVRRHAFVHDAAVSAVSLPTGEVSPLVVGNDLLRIYEERHQRHADVG GLHLRESLQLLSPVWTGEVLELSGRYAGWFPRGDVACLVVDAEAHGEDGRLIARARATESLPAAPDGVPERPPLPSLPRR VSPSAGPVGEAAHPWRTPMPGARLPELRRRLEQEHLSVYSGGASFERNLHTDPDKAAERGYARPVAQGMHLCGLVDELCR QHLGVRWWLGGELDVRFVGPVLAGSPLVVGGAVVATDERGGSRVEIDVWVTCGEDAVLVGVASAPR
Sequences:
>Translated_306_residues MSAARGVDDWSRTPDRAAQNETFGPRRVVVSDALVRRHAFVHDAAVSAVSLPTGEVSPLVVGNDLLRIYEERHQRHADVG GLHLRESLQLLSPVWTGEVLELSGRYAGWFPRGDVACLVVDAEAHGEDGRLIARARATESLPAAPDGVPERPPLPSLPRR VSPSAGPVGEAAHPWRTPMPGARLPELRRRLEQEHLSVYSGGASFERNLHTDPDKAAERGYARPVAQGMHLCGLVDELCR QHLGVRWWLGGELDVRFVGPVLAGSPLVVGGAVVATDERGGSRVEIDVWVTCGEDAVLVGVASAPR >Mature_305_residues SAARGVDDWSRTPDRAAQNETFGPRRVVVSDALVRRHAFVHDAAVSAVSLPTGEVSPLVVGNDLLRIYEERHQRHADVGG LHLRESLQLLSPVWTGEVLELSGRYAGWFPRGDVACLVVDAEAHGEDGRLIARARATESLPAAPDGVPERPPLPSLPRRV SPSAGPVGEAAHPWRTPMPGARLPELRRRLEQEHLSVYSGGASFERNLHTDPDKAAERGYARPVAQGMHLCGLVDELCRQ HLGVRWWLGGELDVRFVGPVLAGSPLVVGGAVVATDERGGSRVEIDVWVTCGEDAVLVGVASAPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32984; Mature: 32852
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAARGVDDWSRTPDRAAQNETFGPRRVVVSDALVRRHAFVHDAAVSAVSLPTGEVSPLV CCCCCCCCHHHCCCCHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEE VGNDLLRIYEERHQRHADVGGLHLRESLQLLSPVWTGEVLELSGRYAGWFPRGDVACLVV ECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEE DAEAHGEDGRLIARARATESLPAAPDGVPERPPLPSLPRRVSPSAGPVGEAAHPWRTPMP ECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GARLPELRRRLEQEHLSVYSGGASFERNLHTDPDKAAERGYARPVAQGMHLCGLVDELCR CCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH QHLGVRWWLGGELDVRFVGPVLAGSPLVVGGAVVATDERGGSRVEIDVWVTCGEDAVLVG HHCCEEEEECCEEEEEEECHHHCCCCEEECCEEEEECCCCCCEEEEEEEEEECCCEEEEE VASAPR ECCCCC >Mature Secondary Structure SAARGVDDWSRTPDRAAQNETFGPRRVVVSDALVRRHAFVHDAAVSAVSLPTGEVSPLV CCCCCCCHHHCCCCHHHCCCCCCCCEEHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEE VGNDLLRIYEERHQRHADVGGLHLRESLQLLSPVWTGEVLELSGRYAGWFPRGDVACLVV ECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEEEEE DAEAHGEDGRLIARARATESLPAAPDGVPERPPLPSLPRRVSPSAGPVGEAAHPWRTPMP ECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GARLPELRRRLEQEHLSVYSGGASFERNLHTDPDKAAERGYARPVAQGMHLCGLVDELCR CCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHH QHLGVRWWLGGELDVRFVGPVLAGSPLVVGGAVVATDERGGSRVEIDVWVTCGEDAVLVG HHCCEEEEECCEEEEEEECHHHCCCCEEECCEEEEECCCCCCEEEEEEEEEECCCEEEEE VASAPR ECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA