| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714300
Identifier: 119714300
GI number: 119714300
Start: 31571
End: 32287
Strand: Reverse
Name: 119714300
Synonym: Noca_0028
Alternate gene names: NA
Gene position: 32287-31571 (Counterclockwise)
Preceding gene: 119714302
Following gene: 119714299
Centisome position: 0.65
GC content: 71.97
Gene sequence:
>717_bases GTGGGCGGACTCCAGAAGTTGGAGCACCGGCTCGAGCAGATGATCTCGGGCGCCTTCGCCCGCGCGTTCCGCTCCGCCGT CCAGCCGGTCGAGATCGCCGCGGCCCTCCAGCGCGAGTGCGACAACAACGCCCAGATCCTCTCCCGCGAGCGGCGCCTGG TGCCCAACGACTTCCACGTCGAGCTCTCGCAGACCGACCTGGACCGACTCTCGCCGTACGACTCCGCGCTCGCCGAGGAG CTCGGCACCCAGCTCCGCGACCACGCCGAGCAGCAGAGCTACGTGTTCCCCGGCCCGGTGACGATCGGCTTCGAAGCCGC CGACGACCTGACGACCGGCCGGTTCCGGATCCGCAGCCGAGCCCAGGCGAAGGTCACGAGCGGCGCCACCCACACCCAGG TGGGCCGGGCCCGGGCGGTGCTCGAGGTCAACGGCACCCGGCACCCGCTCCAGCCGCCCGGCCTCGTGGTCGGCCGCGGC ACCGATGCCGACCTGCGGATCAACGACCCCGGCGTCAGCCGCCGGCACGTCGAGTTCACGGTCACCGGGTCCGGATCGCC GGGCGGGTCAGGGATCGCGATCGAGGTCCACGACCTGGGCTCGACCAACGGCATGCTGGTCGACGGCCACCGGATCACCC ACACGGGGCTGCGCGACGGCTCGCAGGTCAAGATCGGCAACACGACCATGACCGTCCGGGTCCTCGAGGAGGGCTGA
Upstream 100 bases:
>100_bases CGCAGCCCGGCCCACCGGTCGGGGTGCCCGCCCTGCCGCCGAGGATTCGGCGAGCGCCCTGGCGGGCACGACCACCGGGA CGTGGACGGAAGGAGGCAGC
Downstream 100 bases:
>100_bases GGATGTCCGAGCTCACGCTGTTCCTGATCCGGCTCGCCTACCTGGCGATCCTCTGGATCTTCGTGCTCTCGGCGATCTCG GTGATCCGCTCCGACATGTT
Product: forkhead-associated protein
Products: NA
Alternate protein names: FHA Domain Containing Protein; Forkhead-Associated Protein; FHA Domain Protein; LOW QUALITY PROTEIN FHA Domain Protein; Signal Transduction Protein; Signaling Protein
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MGGLQKLEHRLEQMISGAFARAFRSAVQPVEIAAALQRECDNNAQILSRERRLVPNDFHVELSQTDLDRLSPYDSALAEE LGTQLRDHAEQQSYVFPGPVTIGFEAADDLTTGRFRIRSRAQAKVTSGATHTQVGRARAVLEVNGTRHPLQPPGLVVGRG TDADLRINDPGVSRRHVEFTVTGSGSPGGSGIAIEVHDLGSTNGMLVDGHRITHTGLRDGSQVKIGNTTMTVRVLEEG
Sequences:
>Translated_238_residues MGGLQKLEHRLEQMISGAFARAFRSAVQPVEIAAALQRECDNNAQILSRERRLVPNDFHVELSQTDLDRLSPYDSALAEE LGTQLRDHAEQQSYVFPGPVTIGFEAADDLTTGRFRIRSRAQAKVTSGATHTQVGRARAVLEVNGTRHPLQPPGLVVGRG TDADLRINDPGVSRRHVEFTVTGSGSPGGSGIAIEVHDLGSTNGMLVDGHRITHTGLRDGSQVKIGNTTMTVRVLEEG >Mature_237_residues GGLQKLEHRLEQMISGAFARAFRSAVQPVEIAAALQRECDNNAQILSRERRLVPNDFHVELSQTDLDRLSPYDSALAEEL GTQLRDHAEQQSYVFPGPVTIGFEAADDLTTGRFRIRSRAQAKVTSGATHTQVGRARAVLEVNGTRHPLQPPGLVVGRGT DADLRINDPGVSRRHVEFTVTGSGSPGGSGIAIEVHDLGSTNGMLVDGHRITHTGLRDGSQVKIGNTTMTVRVLEEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25719; Mature: 25588
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50006 FHA_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGLQKLEHRLEQMISGAFARAFRSAVQPVEIAAALQRECDNNAQILSRERRLVPNDFHV CCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEE ELSQTDLDRLSPYDSALAEELGTQLRDHAEQQSYVFPGPVTIGFEAADDLTTGRFRIRSR EECCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEEECCCCCCCCCEEECCC AQAKVTSGATHTQVGRARAVLEVNGTRHPLQPPGLVVGRGTDADLRINDPGVSRRHVEFT CCEEECCCCCHHHHCCEEEEEEECCCCCCCCCCCEEEECCCCCCEEECCCCCCEEEEEEE VTGSGSPGGSGIAIEVHDLGSTNGMLVDGHRITHTGLRDGSQVKIGNTTMTVRVLEEG EEECCCCCCCEEEEEEEECCCCCCEEEECCEEEECCCCCCCEEEECCEEEEEEEEECC >Mature Secondary Structure GGLQKLEHRLEQMISGAFARAFRSAVQPVEIAAALQRECDNNAQILSRERRLVPNDFHV CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEE ELSQTDLDRLSPYDSALAEELGTQLRDHAEQQSYVFPGPVTIGFEAADDLTTGRFRIRSR EECCCCHHHCCCHHHHHHHHHHHHHHHHHHHCCEECCCCEEEEEECCCCCCCCCEEECCC AQAKVTSGATHTQVGRARAVLEVNGTRHPLQPPGLVVGRGTDADLRINDPGVSRRHVEFT CCEEECCCCCHHHHCCEEEEEEECCCCCCCCCCCEEEECCCCCCEEECCCCCCEEEEEEE VTGSGSPGGSGIAIEVHDLGSTNGMLVDGHRITHTGLRDGSQVKIGNTTMTVRVLEEG EEECCCCCCCEEEEEEEECCCCCCEEEECCEEEECCCCCCCEEEECCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA