| Definition | Nocardioides sp. JS614 chromosome, complete genome. |
|---|---|
| Accession | NC_008699 |
| Length | 4,985,871 |
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The map label for this gene is 119714302
Identifier: 119714302
GI number: 119714302
Start: 33397
End: 34605
Strand: Reverse
Name: 119714302
Synonym: Noca_0030
Alternate gene names: NA
Gene position: 34605-33397 (Counterclockwise)
Preceding gene: 119714308
Following gene: 119714300
Centisome position: 0.69
GC content: 75.35
Gene sequence:
>1209_bases ATGGCCGAGGGCTCCCGCGCGGTGCTGCCGCGACCCACCGGCGGCTTCGACCGCGCATCGATGAGCGCCTCCCTGGCCGG GGTGGCGCTCAGCGTGCTTCCCGTCTACCTCCTCGGCGGACTCACGGTCTTCATCGCCGACGACCTCGACTACGGGGTGG TCGGACTCGGGGCGGCGGCCTCGGCGTTCTACGCGGCCTCCGCGGTCGCCTCGATCCCGGCCGGCCGAGTCGCCCACCGG CTGGGAGCCGAGCGGTCCTTGATCCTCGGCGTGTGCGTGTCGTCCGCGGCGCTGCTCGCGGTCGCCCTGGTCGTGCAGGC CTGGTGGAGTCTGTGTGTGGCCCTGGTCGTCGGCGGCGTGGCGACCGCGCTCGTCCAGCCGGCCGCCAGTGCGCTCGTGG CACGGGACCAGCCCGACAGCCGCCACGGCCTGAGCTTCGGCCTGCTCCAGACGGCCGTCCCGGTGGCCACCCTCGCTGCC GGACTGGCGGTGCCGGTGATCGGGGCCACGTGGGGCTGGCGATGGGCCTACGGCCTCCTGGCGCTGGGCGCCATCCCGAT CGTCGCGTTCGGGCTGCGCCGGGCACCGCGCCGTCTGGAGCGGCGAGCCAACCCTCCGAGCGCGTCCCGGCCGATCCGCG GCGCCGCGATCGTCCTGCTCACGCTCGCCGGCGCCTGCGCGGCCGCGCCCGCGAACGCCCTCGGCGCCTACTACGTCGAG TCCGCGGTCGCCGCCGGCATCTCCCGGTCCGGCGCGGGTCTGTGGCTGGTGGCCGGCAGCGCCGTGGGTATCGGGGCGCG CCTGCTGTGGGGTTGGATGATCGACCGCAGGGGGGCCGACCCGCGCCTGTGGATCGCGGGCCTGATGCTCAGCGGAGGCG TCGGCTTCGCGCTGCTCAGCGTGACCCACACCGCTCCCGTCCTGTTCGCCGCCACCGCGCTGACCTTCGGGGCCGGGTGG GCGTGGAAGGGTCTGTACAACCTCGCGGCGATCCGGCACGACCCCGAGCAGCCGAGCGCGGCCGTCGGCATCGCGCAGTT CGGGGTCTACGTCGGGAGCGTCCTGGGCCCGATCGCTTTCGGCGTCCTCCTGGCGCACAGCTCCTACGCCGTGGCCTGGG CGGCCGCCGGGGTCACCTGCCTGCTGACCCCGGTGCTCATCTGGGTCCAGCGCCGGCTCGGTCGGCCGGCCGCCGGGCAC GGTATCTGA
Upstream 100 bases:
>100_bases TATGGCGCGACCCTAGGGAGCCCGTCGACCGTCTGTCAACAGTAAACACTTGACATCAAGAGAATACTGTTGACTGTCTG GACGACTTGAGGAGGAGCGG
Downstream 100 bases:
>100_bases ACGTCGCGGCCTCGGTGCGGTTCGCCCGGTCGTTCACTCGATCGAGAGCACGAACCGGACGTCGTCGTACCGATCGTCGC CGACCATGATGCCGTCGGGG
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MAEGSRAVLPRPTGGFDRASMSASLAGVALSVLPVYLLGGLTVFIADDLDYGVVGLGAAASAFYAASAVASIPAGRVAHR LGAERSLILGVCVSSAALLAVALVVQAWWSLCVALVVGGVATALVQPAASALVARDQPDSRHGLSFGLLQTAVPVATLAA GLAVPVIGATWGWRWAYGLLALGAIPIVAFGLRRAPRRLERRANPPSASRPIRGAAIVLLTLAGACAAAPANALGAYYVE SAVAAGISRSGAGLWLVAGSAVGIGARLLWGWMIDRRGADPRLWIAGLMLSGGVGFALLSVTHTAPVLFAATALTFGAGW AWKGLYNLAAIRHDPEQPSAAVGIAQFGVYVGSVLGPIAFGVLLAHSSYAVAWAAAGVTCLLTPVLIWVQRRLGRPAAGH GI
Sequences:
>Translated_402_residues MAEGSRAVLPRPTGGFDRASMSASLAGVALSVLPVYLLGGLTVFIADDLDYGVVGLGAAASAFYAASAVASIPAGRVAHR LGAERSLILGVCVSSAALLAVALVVQAWWSLCVALVVGGVATALVQPAASALVARDQPDSRHGLSFGLLQTAVPVATLAA GLAVPVIGATWGWRWAYGLLALGAIPIVAFGLRRAPRRLERRANPPSASRPIRGAAIVLLTLAGACAAAPANALGAYYVE SAVAAGISRSGAGLWLVAGSAVGIGARLLWGWMIDRRGADPRLWIAGLMLSGGVGFALLSVTHTAPVLFAATALTFGAGW AWKGLYNLAAIRHDPEQPSAAVGIAQFGVYVGSVLGPIAFGVLLAHSSYAVAWAAAGVTCLLTPVLIWVQRRLGRPAAGH GI >Mature_401_residues AEGSRAVLPRPTGGFDRASMSASLAGVALSVLPVYLLGGLTVFIADDLDYGVVGLGAAASAFYAASAVASIPAGRVAHRL GAERSLILGVCVSSAALLAVALVVQAWWSLCVALVVGGVATALVQPAASALVARDQPDSRHGLSFGLLQTAVPVATLAAG LAVPVIGATWGWRWAYGLLALGAIPIVAFGLRRAPRRLERRANPPSASRPIRGAAIVLLTLAGACAAAPANALGAYYVES AVAAGISRSGAGLWLVAGSAVGIGARLLWGWMIDRRGADPRLWIAGLMLSGGVGFALLSVTHTAPVLFAATALTFGAGWA WKGLYNLAAIRHDPEQPSAAVGIAQFGVYVGSVLGPIAFGVLLAHSSYAVAWAAAGVTCLLTPVLIWVQRRLGRPAAGHG I
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40734; Mature: 40603
Theoretical pI: Translated: 10.70; Mature: 10.70
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEGSRAVLPRPTGGFDRASMSASLAGVALSVLPVYLLGGLTVFIADDLDYGVVGLGAAA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEHHHHH SAFYAASAVASIPAGRVAHRLGAERSLILGVCVSSAALLAVALVVQAWWSLCVALVVGGV HHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATALVQPAASALVARDQPDSRHGLSFGLLQTAVPVATLAAGLAVPVIGATWGWRWAYGLL HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ALGAIPIVAFGLRRAPRRLERRANPPSASRPIRGAAIVLLTLAGACAAAPANALGAYYVE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH SAVAAGISRSGAGLWLVAGSAVGIGARLLWGWMIDRRGADPRLWIAGLMLSGGVGFALLS HHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHH VTHTAPVLFAATALTFGAGWAWKGLYNLAAIRHDPEQPSAAVGIAQFGVYVGSVLGPIAF HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GVLLAHSSYAVAWAAAGVTCLLTPVLIWVQRRLGRPAAGHGI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure AEGSRAVLPRPTGGFDRASMSASLAGVALSVLPVYLLGGLTVFIADDLDYGVVGLGAAA CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEHHHHH SAFYAASAVASIPAGRVAHRLGAERSLILGVCVSSAALLAVALVVQAWWSLCVALVVGGV HHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ATALVQPAASALVARDQPDSRHGLSFGLLQTAVPVATLAAGLAVPVIGATWGWRWAYGLL HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH ALGAIPIVAFGLRRAPRRLERRANPPSASRPIRGAAIVLLTLAGACAAAPANALGAYYVE HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH SAVAAGISRSGAGLWLVAGSAVGIGARLLWGWMIDRRGADPRLWIAGLMLSGGVGFALLS HHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHH VTHTAPVLFAATALTFGAGWAWKGLYNLAAIRHDPEQPSAAVGIAQFGVYVGSVLGPIAF HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH GVLLAHSSYAVAWAAAGVTCLLTPVLIWVQRRLGRPAAGHGI HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA