| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
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The map label for this gene is 119387045
Identifier: 119387045
GI number: 119387045
Start: 1523736
End: 1524257
Strand: Direct
Name: 119387045
Synonym: Pden_4340
Alternate gene names: NA
Gene position: 1523736-1524257 (Clockwise)
Preceding gene: 119387044
Following gene: 119387050
Centisome position: 88.07
GC content: 66.67
Gene sequence:
>522_bases GTGACCGCGCCGCCGCCGATACCGGGGGCCGCGGCGGCCGAAACCGACCTGGATGCGGTGCTGCTGCGCGTCGGGCGGCT GAACTATGCCTGGAGCAATACGGAAAGCCTGCTGATCCACATGCTGGCCGGGCTGACCGGCATGGACAAGGGCGCCGCCG TCGTGGTCTTCCTGTCGGTCTCCTCGACGCGCGGCCGGATCGAGATGGTCGAGCGGCTCGCGAAACTGCGCCGGCCGGCC GGAGAGGAACAGCGCGAACTGCTGGAACTGACGGCGCGCTTCGCCAGGCTCTCCGCCGTCCGGCATCGCTACAACCACAG CATCTGGTCCTTCCAGGAGGACGGCTCGGTCTCGACGATCCTGATGCGGATCGCAGACCGGCGCGACCGCATCCACATGG GCAGGAAACAGGCCCTTGGCAACGACGAGATGCTGCGGCTGGACCGGGACCTTGAAATGCTGTCCCAACTCAACCGCAAC ATCTGGCGCTTCCTGCTGAAACACGGATACCCGGTCGACTGA
Upstream 100 bases:
>100_bases TGTCGGTCCATACGGTCAAGCTGCACCTTCGCAATGCCAGCCTGCGGCTTGGCGCGCATAACCGCACCGAGGCCGCCATG CGCTATCGCGCCTTGCGATC
Downstream 100 bases:
>100_bases AGGGGCGGCCATGCCTTCCGGCCGCCCTGCACCGTCCGGCGCCAATAGGGAAAAGGCGGCGCGCCATGGGCGCGCGCGCC GCTGCGTCAGGTCTCGATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MTAPPPIPGAAAAETDLDAVLLRVGRLNYAWSNTESLLIHMLAGLTGMDKGAAVVVFLSVSSTRGRIEMVERLAKLRRPA GEEQRELLELTARFARLSAVRHRYNHSIWSFQEDGSVSTILMRIADRRDRIHMGRKQALGNDEMLRLDRDLEMLSQLNRN IWRFLLKHGYPVD
Sequences:
>Translated_173_residues MTAPPPIPGAAAAETDLDAVLLRVGRLNYAWSNTESLLIHMLAGLTGMDKGAAVVVFLSVSSTRGRIEMVERLAKLRRPA GEEQRELLELTARFARLSAVRHRYNHSIWSFQEDGSVSTILMRIADRRDRIHMGRKQALGNDEMLRLDRDLEMLSQLNRN IWRFLLKHGYPVD >Mature_172_residues TAPPPIPGAAAAETDLDAVLLRVGRLNYAWSNTESLLIHMLAGLTGMDKGAAVVVFLSVSSTRGRIEMVERLAKLRRPAG EEQRELLELTARFARLSAVRHRYNHSIWSFQEDGSVSTILMRIADRRDRIHMGRKQALGNDEMLRLDRDLEMLSQLNRNI WRFLLKHGYPVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19648; Mature: 19517
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPPPIPGAAAAETDLDAVLLRVGRLNYAWSNTESLLIHMLAGLTGMDKGAAVVVFLSV CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEC SSTRGRIEMVERLAKLRRPAGEEQRELLELTARFARLSAVRHRYNHSIWSFQEDGSVSTI CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH LMRIADRRDRIHMGRKQALGNDEMLRLDRDLEMLSQLNRNIWRFLLKHGYPVD HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TAPPPIPGAAAAETDLDAVLLRVGRLNYAWSNTESLLIHMLAGLTGMDKGAAVVVFLSV CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEEC SSTRGRIEMVERLAKLRRPAGEEQRELLELTARFARLSAVRHRYNHSIWSFQEDGSVSTI CCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHH LMRIADRRDRIHMGRKQALGNDEMLRLDRDLEMLSQLNRNIWRFLLKHGYPVD HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA