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The map label for this gene is yhjB [C]

Identifier: 119387044

GI number: 119387044

Start: 1523038

End: 1523739

Strand: Direct

Name: yhjB [C]

Synonym: Pden_4339

Alternate gene names: 119387044

Gene position: 1523038-1523739 (Clockwise)

Preceding gene: 119387039

Following gene: 119387045

Centisome position: 88.03

GC content: 61.97

Gene sequence:

>702_bases
ATGAACATGGCATCTTGCGATGGCGTATCCAGTACAATTCATACGCTGTCTGACCAGCCTGCGCGTGGAACGGCGGAGAT
TCTCTTCGTCGGAACGCAATGCAATTTTTCACATAGCCTGATTTCGGTAACCAGCCAGGAACTGGGACATATCACCGTCG
CCGCTGCATCATCCTTCAACGATTTCCGCAGCCTGTCCGAACTGACCCATGAAAGGCCCACGCTGCTGGTCCTGGACGAG
CCGACGATGCGCGGCCTGACAAGGGAGGATCGCACCTATCTGCTGGGCCTGACCGACATGGCGCTGGCCGTCGCCTTCTG
CACCGGCGCCTTCGGGCGCGCCTGTTATGAGGATGAAGAGCTGCGGCGGCACGCAACCAGCATCTTCCCGCTGAATGTCC
GGCTGGACGTATGGCTTTCCGTCATCAAGCTGGTCGCACATGGCGGCAACTACATCTTTCCCGAGATCATCTCGCCGGTC
GGGGTCGCGATGCCGGTCCCGGCCACGGACGAGCTTGGCCTGACCCGGCGCCAGCAGGACGTGCTGCGTCTGGTCGCCGA
CGGCCAGTCGAACAAGCGGATAGCCCTGAGCCTGGGGCTGTCGGTCCATACGGTCAAGCTGCACCTTCGCAATGCCAGCC
TGCGGCTTGGCGCGCATAACCGCACCGAGGCCGCCATGCGCTATCGCGCCTTGCGATCGTGA

Upstream 100 bases:

>100_bases
TTCGGGAAGGGCGGCGATTTGCTATGGTGAACAGATCGGTCCGCTTGGGAGAGCCGACCGATACGGGGGAAAAGACCATA
CGCAAGAAGGTAGGAATGAC

Downstream 100 bases:

>100_bases
CCGCGCCGCCGCCGATACCGGGGGCCGCGGCGGCCGAAACCGACCTGGATGCGGTGCTGCTGCGCGTCGGGCGGCTGAAC
TATGCCTGGAGCAATACGGA

Product: response regulator receiver protein

Products: NA

Alternate protein names: Transcriptional Regulator LuxR Family Protein; Transcriptional Regulator Protein LuxR Family; LuxR Family Two Component Transcriptional Regulator; Two-Component System Response Regulator

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MNMASCDGVSSTIHTLSDQPARGTAEILFVGTQCNFSHSLISVTSQELGHITVAAASSFNDFRSLSELTHERPTLLVLDE
PTMRGLTREDRTYLLGLTDMALAVAFCTGAFGRACYEDEELRRHATSIFPLNVRLDVWLSVIKLVAHGGNYIFPEIISPV
GVAMPVPATDELGLTRRQQDVLRLVADGQSNKRIALSLGLSVHTVKLHLRNASLRLGAHNRTEAAMRYRALRS

Sequences:

>Translated_233_residues
MNMASCDGVSSTIHTLSDQPARGTAEILFVGTQCNFSHSLISVTSQELGHITVAAASSFNDFRSLSELTHERPTLLVLDE
PTMRGLTREDRTYLLGLTDMALAVAFCTGAFGRACYEDEELRRHATSIFPLNVRLDVWLSVIKLVAHGGNYIFPEIISPV
GVAMPVPATDELGLTRRQQDVLRLVADGQSNKRIALSLGLSVHTVKLHLRNASLRLGAHNRTEAAMRYRALRS
>Mature_233_residues
MNMASCDGVSSTIHTLSDQPARGTAEILFVGTQCNFSHSLISVTSQELGHITVAAASSFNDFRSLSELTHERPTLLVLDE
PTMRGLTREDRTYLLGLTDMALAVAFCTGAFGRACYEDEELRRHATSIFPLNVRLDVWLSVIKLVAHGGNYIFPEIISPV
GVAMPVPATDELGLTRRQQDVLRLVADGQSNKRIALSLGLSVHTVKLHLRNASLRLGAHNRTEAAMRYRALRS

Specific function: Unknown

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25557; Mature: 25557

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNMASCDGVSSTIHTLSDQPARGTAEILFVGTQCNFSHSLISVTSQELGHITVAAASSFN
CCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCHH
DFRSLSELTHERPTLLVLDEPTMRGLTREDRTYLLGLTDMALAVAFCTGAFGRACYEDEE
HHHHHHHHHCCCCEEEEECCCHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHH
LRRHATSIFPLNVRLDVWLSVIKLVAHGGNYIFPEIISPVGVAMPVPATDELGLTRRQQD
HHHHHHEEEEEEEHHHHHHHHHHHHHCCCCEECHHHHCCCCCEECCCCCCCCCCHHHHHH
VLRLVADGQSNKRIALSLGLSVHTVKLHLRNASLRLGAHNRTEAAMRYRALRS
HHHHHHCCCCCCEEEEEECCEEEEEEEEEECCEEEECCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MNMASCDGVSSTIHTLSDQPARGTAEILFVGTQCNFSHSLISVTSQELGHITVAAASSFN
CCCCCCCCHHHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCHH
DFRSLSELTHERPTLLVLDEPTMRGLTREDRTYLLGLTDMALAVAFCTGAFGRACYEDEE
HHHHHHHHHCCCCEEEEECCCHHCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHH
LRRHATSIFPLNVRLDVWLSVIKLVAHGGNYIFPEIISPVGVAMPVPATDELGLTRRQQD
HHHHHHEEEEEEEHHHHHHHHHHHHHCCCCEECHHHHCCCCCEECCCCCCCCCCHHHHHH
VLRLVADGQSNKRIALSLGLSVHTVKLHLRNASLRLGAHNRTEAAMRYRALRS
HHHHHHCCCCCCEEEEEECCEEEEEEEEEECCEEEECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA