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The map label for this gene is yqjH [H]

Identifier: 119386945

GI number: 119386945

Start: 1405972

End: 1406949

Strand: Direct

Name: yqjH [H]

Synonym: Pden_4240

Alternate gene names: 119386945

Gene position: 1405972-1406949 (Clockwise)

Preceding gene: 119386944

Following gene: 119386947

Centisome position: 81.27

GC content: 74.85

Gene sequence:

>978_bases
ATGTTCCCGATCAGACCCTATCGCAGCACCGGGATCCTCGGCTCGGCCTCGGGGGCGGCGGCGGCCGCGCTCAAGGCCCG
CGCCGCGGAATGGGAGATCGACCTGATCGAGACCCCCGACAGCCTGGCGCTGCATCTTTGGGGCTGCGAGCTGGCGCTGG
TGCGTGACGGGGCCTCGGCCCGGCTTGAACTCAGCGCGCCCGAGCGGCGGCTGATCGGCAATTTGCAGGACACCGCCACC
ACGCTGTTCGAGGAGCAGGGCCTGAGCATCCGCTGGGACAATGTCGACGAGGGCGCGCTGGCCCCCGGCCTGTCGCTGAT
GCGGGTGGTCGGGGTCGCGGCGCGCACCCCCGGCTTCCTGCGCGTCCGCGTCTCGGGCGAGGATGCCGCCCGCTTCGGCG
AAGGCTCGCTGCATTTCCGCCTGCTGCTGCCGCCGGCCGGGCGCAAGCCGCATTGGCCGCGCATCGCCGCCAGCGGCCGC
ACCGTCTGGCCCGAGGGGCCGGATGCGCCGCATCGCGCCGTCTATACCGTCGCCGCGCAGCGCGGGGACTGGGTGGATTT
CGACATCTTCCGCCATGCGGACAGCCCGACCTGCGACTGGGCGGATCGCGCCCGGCCCGGCGATCCGGTCGGGCTGATCG
GCCCCGGCGGCGGCGGTTGCCCCGAAGCCGGCCGGCTGTGGCTCTTTGGCGACGAGACCGCCCTGCCCGCCATCGCGCGG
ATGCTGGACCAGGCGCGGGGCGAGGTGCAGGCCGTCCTGCGCGCCGCGCCCGCGGATCTGGCCGAACTGGCCCGCGACCC
GCGCGTCAGCCGCTGCGACGACCTGCTGGCCGCGCTGGACGCCGCCGGCTTCGATGCGGCGCAGGACCGTCATGTCTGGT
TCGCCGGCCCCGCGCATGAAGCCCGCGAGGCGCGGCGGCGGCTTGCCGCGCGCGGCCTGTCCCGCCGCGAATTCACCGCC
GCCGCCTATTGGGGCTGA

Upstream 100 bases:

>100_bases
GCCTTGCTCGACCGCGAGGGGGCGGCATAGGCACCGTATTGCCGAGAGTTTCGCTTGGGTATATATCCGGCCGCGATGCT
GGCTGCCGGAAAGACCTGCC

Downstream 100 bases:

>100_bases
ACCCTCAGGCCAGGATGCGCAGCCGCGGCAGCGAGGCCGCCGCAGCCCCCCAGGCAAGCGCCGCGCAAAGCGCGATCGCC
GGCACCATGGTCGCCGCGGT

Product: FAD-binding 9, siderophore-interacting domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MFPIRPYRSTGILGSASGAAAAALKARAAEWEIDLIETPDSLALHLWGCELALVRDGASARLELSAPERRLIGNLQDTAT
TLFEEQGLSIRWDNVDEGALAPGLSLMRVVGVAARTPGFLRVRVSGEDAARFGEGSLHFRLLLPPAGRKPHWPRIAASGR
TVWPEGPDAPHRAVYTVAAQRGDWVDFDIFRHADSPTCDWADRARPGDPVGLIGPGGGGCPEAGRLWLFGDETALPAIAR
MLDQARGEVQAVLRAAPADLAELARDPRVSRCDDLLAALDAAGFDAAQDRHVWFAGPAHEAREARRRLAARGLSRREFTA
AAYWG

Sequences:

>Translated_325_residues
MFPIRPYRSTGILGSASGAAAAALKARAAEWEIDLIETPDSLALHLWGCELALVRDGASARLELSAPERRLIGNLQDTAT
TLFEEQGLSIRWDNVDEGALAPGLSLMRVVGVAARTPGFLRVRVSGEDAARFGEGSLHFRLLLPPAGRKPHWPRIAASGR
TVWPEGPDAPHRAVYTVAAQRGDWVDFDIFRHADSPTCDWADRARPGDPVGLIGPGGGGCPEAGRLWLFGDETALPAIAR
MLDQARGEVQAVLRAAPADLAELARDPRVSRCDDLLAALDAAGFDAAQDRHVWFAGPAHEAREARRRLAARGLSRREFTA
AAYWG
>Mature_325_residues
MFPIRPYRSTGILGSASGAAAAALKARAAEWEIDLIETPDSLALHLWGCELALVRDGASARLELSAPERRLIGNLQDTAT
TLFEEQGLSIRWDNVDEGALAPGLSLMRVVGVAARTPGFLRVRVSGEDAARFGEGSLHFRLLLPPAGRKPHWPRIAASGR
TVWPEGPDAPHRAVYTVAAQRGDWVDFDIFRHADSPTCDWADRARPGDPVGLIGPGGGGCPEAGRLWLFGDETALPAIAR
MLDQARGEVQAVLRAAPADLAELARDPRVSRCDDLLAALDAAGFDAAQDRHVWFAGPAHEAREARRRLAARGLSRREFTA
AAYWG

Specific function: Unknown

COG id: COG2375

COG function: function code P; Siderophore-interacting protein

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To Vibrio vibriobactin/vulbinactin utilization protein viuB [H]

Homologues:

Organism=Escherichia coli, GI1789450, Length=251, Percent_Identity=27.0916334661355, Blast_Score=67, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013113
- InterPro:   IPR017927
- InterPro:   IPR017938
- InterPro:   IPR007037 [H]

Pfam domain/function: PF08021 FAD_binding_9; PF04954 SIP [H]

EC number: NA

Molecular weight: Translated: 35026; Mature: 35026

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPIRPYRSTGILGSASGAAAAALKARAAEWEIDLIETPDSLALHLWGCELALVRDGASA
CCCCCCCCCCCCEECCCCHHHHHHHHHCCCEEEEEEECCCCEEEEEECCEEEEEECCCCC
RLELSAPERRLIGNLQDTATTLFEEQGLSIRWDNVDEGALAPGLSLMRVVGVAARTPGFL
EEEECCCHHHHHCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEE
RVRVSGEDAARFGEGSLHFRLLLPPAGRKPHWPRIAASGRTVWPEGPDAPHRAVYTVAAQ
EEEECCCHHHHCCCCCEEEEEEECCCCCCCCCCEEECCCCEECCCCCCCCCCEEEEEEEC
RGDWVDFDIFRHADSPTCDWADRARPGDPVGLIGPGGGGCPEAGRLWLFGDETALPAIAR
CCCEEEEHHEECCCCCCCCCHHCCCCCCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHH
MLDQARGEVQAVLRAAPADLAELARDPRVSRCDDLLAALDAAGFDAAQDRHVWFAGPAHE
HHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHH
AREARRRLAARGLSRREFTAAAYWG
HHHHHHHHHHCCCCCHHEEEEECCC
>Mature Secondary Structure
MFPIRPYRSTGILGSASGAAAAALKARAAEWEIDLIETPDSLALHLWGCELALVRDGASA
CCCCCCCCCCCCEECCCCHHHHHHHHHCCCEEEEEEECCCCEEEEEECCEEEEEECCCCC
RLELSAPERRLIGNLQDTATTLFEEQGLSIRWDNVDEGALAPGLSLMRVVGVAARTPGFL
EEEECCCHHHHHCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHCCCCEE
RVRVSGEDAARFGEGSLHFRLLLPPAGRKPHWPRIAASGRTVWPEGPDAPHRAVYTVAAQ
EEEECCCHHHHCCCCCEEEEEEECCCCCCCCCCEEECCCCEECCCCCCCCCCEEEEEEEC
RGDWVDFDIFRHADSPTCDWADRARPGDPVGLIGPGGGGCPEAGRLWLFGDETALPAIAR
CCCEEEEHHEECCCCCCCCCHHCCCCCCCEEEECCCCCCCCCCCEEEEEECCHHHHHHHH
MLDQARGEVQAVLRAAPADLAELARDPRVSRCDDLLAALDAAGFDAAQDRHVWFAGPAHE
HHHHHHHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHH
AREARRRLAARGLSRREFTAAAYWG
HHHHHHHHHHCCCCCHHEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]